Genomic map of Mycobacterium phage Milly (NC_026598)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_026598
Definition
Mycobacterium phage Milly, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
DB of origin
REFSEQ
Length
58211
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
94
%GC
68.31
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009125551.1 NC_026598_p77 DNA binding domain protein phrog_908 unknown function unknown function 1 51107 52009
YP_009125530.1 NC_026598_p56 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 40517 41149
YP_009125524.1 NC_026598_p50 hypothetical protein phrog_2654 unknown function unknown function 1 38071 38289
YP_009125545.1 NC_026598_p71 HNH endonuclease phrog_1571 HNH endonuclease DNA, RNA and nucleotide metabolism 1 46475 46819
YP_009125486.1 NC_026598_p12 hypothetical protein phrog_387 neck protein connector 1 7693 7965
YP_009125485.1 NC_026598_p11 hypothetical protein phrog_763 head-tail adaptor connector 1 7362 7712
YP_009125522.1 NC_026598_p48 Xis phrog_1840 excisionase integration and excision 1 37512 37769
YP_009125557.1 NC_026598_p83 hypothetical protein phrog_2342 unknown function unknown function 1 53925 54704
YP_009125504.1 NC_026598_p30 holin phrog_565 holin lysis 1 26001 26387
YP_009125562.1 NC_026598_p88 hypothetical protein phrog_6135 unknown function unknown function 1 56157 56420
YP_009125494.1 NC_026598_p20 minor tail protein phrog_1697 minor tail protein tail 1 16782 17246
YP_009125568.1 NC_026598_p94 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 57772 58050
YP_009125544.1 NC_026598_p70 hypothetical protein phrog_1091 unknown function unknown function 1 46311 46478
YP_009125505.1 NC_026598_p31 hypothetical protein phrog_1298 minor tail protein tail 1 26470 26889
YP_009125477.1 NC_026598_p3 hypothetical protein phrog_1459 terminase small subunit head and packaging 1 426 674
YP_009125533.1 NC_026598_p59 hypothetical protein phrog_18188 unknown function unknown function 1 41805 41921
YP_009125556.1 NC_026598_p82 SprT-like protein phrog_1006 unknown function unknown function 1 53316 53885
YP_009125490.1 NC_026598_p16 tail assembly chaperone phrog_1861 unknown function unknown function 1 9253 9702
YP_009125529.1 NC_026598_p55 hydrolase domain protein phrog_15484 hydrolase other 1 39762 40520
YP_009125475.1 NC_026598_p1 hypothetical protein phrog_5391 unknown function unknown function 1 88 222
YP_009125539.1 NC_026598_p65 hypothetical protein phrog_14762 unknown function unknown function 1 44691 45011
YP_009125548.1 NC_026598_p74 RusA phrog_3055 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 49842 50477
YP_009125507.1 NC_026598_p33 hypothetical protein phrog_1738 unknown function unknown function 1 27367 27615
YP_009125488.1 NC_026598_p14 major tail protein phrog_117 major tail protein tail 1 8532 9146
YP_009125558.1 NC_026598_p84 hypothetical protein phrog_3868 unknown function unknown function 1 54701 54961
YP_009125482.1 NC_026598_p8 scaffolding protein phrog_1793 head scaffolding protein head and packaging 1 5349 5891
YP_009125547.1 NC_026598_p73 hypothetical protein phrog_27140 unknown function unknown function 1 49375 49839
YP_009125515.1 NC_026598_p41 DNA binding domain protein phrog_4095 unknown function unknown function 1 32168 32866
YP_009125483.1 NC_026598_p9 major capsid protein phrog_10 major head protein head and packaging 1 5947 6864
YP_009125502.1 NC_026598_p28 lysin A phrog_1519 endolysin lysis 1 23083 24774
YP_009125484.1 NC_026598_p10 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 6976 7362
YP_009125497.1 NC_026598_p23 minor tail protein phrog_746 minor tail protein tail 1 18661 21000
YP_009125542.1 NC_026598_p68 hypothetical protein phrog_1911 unknown function unknown function 1 45460 45978
YP_009125538.1 NC_026598_p64 hypothetical protein phrog_353 toxin moron, auxiliary metabolic gene and host takeover 1 44382 44600
YP_009125503.1 NC_026598_p29 lysin B phrog_102 endolysin lysis 1 24780 25982
YP_009125531.1 NC_026598_p57 hypothetical protein phrog_3186 unknown function unknown function 1 41142 41537
YP_009125478.1 NC_026598_p4 terminase phrog_2 terminase large subunit head and packaging 1 652 2076
YP_009125498.1 NC_026598_p24 minor tail protein phrog_3901 unknown function unknown function 1 21001 21282
YP_009125514.1 NC_026598_p40 hypothetical protein phrog_806 unknown function unknown function -1 31467 32030
YP_009125487.1 NC_026598_p13 hypothetical protein phrog_123 tail terminator connector 1 7962 8381
YP_009125495.1 NC_026598_p21 minor tail protein phrog_1565 minor tail protein tail 1 17339 18418
YP_009125492.1 NC_026598_p18 minor tail protein phrog_106 minor tail protein tail 1 13889 15016
YP_009125501.1 NC_026598_p27 hypothetical protein phrog_240 head protein head and packaging 1 22685 23053
YP_009125516.1 NC_026598_p42 queuine tRNA-ribosyltransferase phrog_1279 queuine tRNA-ribosyltransferase moron, auxiliary metabolic gene and host takeover 1 32988 33833
YP_009125564.1 NC_026598_p90 hypothetical protein phrog_2057 unknown function unknown function 1 56870 57037
YP_009125525.1 NC_026598_p51 hypothetical protein phrog_3903 unknown function unknown function 1 38286 38567
YP_009125550.1 NC_026598_p76 hypothetical protein phrog_15365 unknown function unknown function 1 50785 51114
YP_009125512.1 NC_026598_p38 hypothetical protein phrog_2433 unknown function unknown function 1 30315 31019
YP_009125535.1 NC_026598_p61 hydrolase phrog_789 esterase/lipase other 1 42534 43358
YP_009125493.1 NC_026598_p19 minor tail protein phrog_110 minor tail protein tail 1 15013 16782
YP_009125541.1 NC_026598_p67 hypothetical protein phrog_2388 unknown function unknown function 1 45272 45391
YP_009125554.1 NC_026598_p80 hypothetical protein phrog_14958 unknown function unknown function 1 52756 52893
YP_009125508.1 NC_026598_p34 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 27602 28786
YP_009125560.1 NC_026598_p86 hypothetical protein phrog_7638 unknown function unknown function 1 55310 55798
YP_009125532.1 NC_026598_p58 hypothetical protein phrog_1956 unknown function unknown function 1 41530 41808
YP_009125517.1 NC_026598_p43 integrase phrog_1 integrase integration and excision 1 34290 35390
YP_009125565.1 NC_026598_p91 hypothetical protein phrog_12460 unknown function unknown function 1 57047 57283
YP_009125510.1 NC_026598_p36 transcription factor phrog_2311 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 29410 29814
YP_009125509.1 NC_026598_p35 hypothetical protein phrog_12831 transcriptional repressor transcription regulation 1 28944 29279
YP_009125537.1 NC_026598_p63 hypothetical protein phrog_15653 unknown function unknown function 1 44209 44385
YP_009125566.1 NC_026598_p92 hypothetical protein phrog_747 unknown function unknown function 1 57296 57592
YP_009125500.1 NC_026598_p26 hypothetical protein phrog_2269 unknown function unknown function 1 22292 22531
YP_009125476.1 NC_026598_p2 hypothetical protein phrog_2622 unknown function unknown function 1 224 436
YP_009125481.1 NC_026598_p7 hypothetical protein phrog_1757 unknown function unknown function 1 5091 5276
YP_009125499.1 NC_026598_p25 minor tail protein phrog_416 minor tail protein tail 1 21282 22277
YP_009125559.1 NC_026598_p85 hypothetical protein phrog_666 unknown function unknown function 1 54955 55176
YP_009125552.1 NC_026598_p78 hypothetical protein phrog_6045 unknown function unknown function 1 52006 52467
YP_009125553.1 NC_026598_p79 hypothetical protein phrog_1338 unknown function unknown function 1 52464 52733
YP_009125489.1 NC_026598_p15 tail assembly chaperone phrog_1326 tail assembly chaperone tail 1 9253 10115
YP_009125563.1 NC_026598_p89 hypothetical protein phrog_15374 unknown function unknown function 1 56544 56873
YP_009125523.1 NC_026598_p49 hypothetical protein phrog_15371 unknown function unknown function 1 37774 37995
YP_009125567.1 NC_026598_p93 hypothetical protein phrog_15574 unknown function unknown function 1 57605 57775
YP_009125480.1 NC_026598_p6 capsid maturation protease phrog_1752 head maturation protease head and packaging 1 3574 5094
YP_009125519.1 NC_026598_p45 hypothetical protein phrog_950 unknown function unknown function -1 35717 36565
YP_009125511.1 NC_026598_p37 hypothetical protein phrog_14992 unknown function unknown function 1 29822 30196
YP_009125543.1 NC_026598_p69 NrdH-like glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 46066 46311
YP_009125518.1 NC_026598_p44 hypothetical protein phrog_27584 unknown function unknown function 1 35416 35658
YP_009125540.1 NC_026598_p66 hypothetical protein phrog_5466 unknown function unknown function 1 45008 45217
YP_009125561.1 NC_026598_p87 hypothetical protein phrog_26442 unknown function unknown function 1 55795 56034
YP_009125526.1 NC_026598_p52 hypothetical protein phrog_1622 unknown function unknown function 1 38581 38790
YP_009125520.1 NC_026598_p46 immunity repressor phrog_1746 transcriptional repressor transcription regulation -1 36653 37024
YP_009125521.1 NC_026598_p47 transcription regulator phrog_1702 transcriptional repressor transcription regulation 1 37198 37515
YP_009125506.1 NC_026598_p32 hypothetical protein phrog_726 unknown function unknown function 1 26879 27370
YP_009125491.1 NC_026598_p17 tapemeasure phrog_971 endolysin lysis 1 10116 13784
YP_009125536.1 NC_026598_p62 exonuclease phrog_1674 exonuclease DNA, RNA and nucleotide metabolism 1 43355 44212
YP_009125555.1 NC_026598_p81 hypothetical protein phrog_5546 unknown function unknown function 1 52951 53262
YP_009125479.1 NC_026598_p5 portal protein phrog_104 portal protein head and packaging 1 2088 3593
YP_009125546.1 NC_026598_p72 DNA primase/helicase phrog_2478 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 46832 49378
YP_009125527.1 NC_026598_p53 hypothetical protein phrog_2286 unknown function unknown function 1 38795 39535
YP_009125528.1 NC_026598_p54 WhiB-like protein phrog_472 WhiB transcriptional factor transcription regulation 1 39532 39765
YP_009125549.1 NC_026598_p75 hypothetical protein phrog_17570 unknown function unknown function 1 50474 50788
YP_009125534.1 NC_026598_p60 DnaQ phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 42004 42537
YP_009125496.1 NC_026598_p22 minor tail protein phrog_1736 minor tail protein tail 1 18423 18677
YP_009125513.1 NC_026598_p39 hypothetical protein phrog_549 unknown function unknown function -1 31087 31470