Genomic map of Pseudomonas phage vB_PaeP_C2-10_Ab22 (NC_026599)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_026599
Definition
Pseudomonas phage vB_PaeP_C2-10_Ab22, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Bruynoghevirus.
DB of origin
REFSEQ
Length
45808
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
71
%GC
52.35
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009125634.1 NC_026599_p66 capsid and scaffold protein phrog_3927 head scaffolding protein head and packaging -1 39093 40088
YP_009125577.1 NC_026599_p9 hypothetical protein phrog_11682 unknown function unknown function 1 3177 3323
YP_009125616.1 NC_026599_p48 hypothetical protein phrog_2251 unknown function unknown function 1 25195 25404
YP_009125574.1 NC_026599_p6 hypothetical protein phrog_12073 unknown function unknown function 1 2351 2533
YP_009125633.1 NC_026599_p65 capsid and scaffold protein phrog_1328 major head protein head and packaging -1 38121 39074
YP_009125626.1 NC_026599_p58 hypothetical protein phrog_8092 unknown function unknown function -1 33815 34504
YP_009125622.1 NC_026599_p54 hypothetical protein phrog_7725 virion structural protein head and packaging -1 30563 32077
YP_009125614.1 NC_026599_p46 hypothetical protein phrog_221 metallo-phosphoesterase other 1 24215 24976
YP_009125607.1 NC_026599_p39 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 20407 20961
YP_009125605.1 NC_026599_p37 hypothetical protein phrog_9754 unknown function unknown function 1 18502 18699
YP_009125578.1 NC_026599_p10 hypothetical protein phrog_10516 unknown function unknown function 1 3333 3596
YP_009125630.1 NC_026599_p62 hypothetical protein phrog_402 unknown function unknown function -1 36920 37111
YP_009125629.1 NC_026599_p61 hypothetical protein phrog_8140 unknown function unknown function -1 36688 36936
YP_009125572.1 NC_026599_p4 hypothetical protein phrog_9596 unknown function unknown function 1 1816 2034
YP_009125581.1 NC_026599_p13 hypothetical protein phrog_8299 unknown function unknown function 1 4285 4710
YP_009125619.1 NC_026599_p51 hypothetical protein phrog_8259 unknown function unknown function -1 25975 26331
YP_009125599.1 NC_026599_p31 hypothetical protein phrog_4590 unknown function unknown function 1 16739 17050
YP_009125585.1 NC_026599_p17 transposase fusion protein phrog_200 lipoprotein other 1 5508 6332
YP_009125625.1 NC_026599_p57 hypothetical protein phrog_7642 unknown function unknown function -1 33384 33818
YP_009125604.1 NC_026599_p36 hypothetical protein phrog_7819 tail length tape measure protein tail 1 17988 18497
YP_009125639.1 NC_026599_p71 hypothetical protein phrog_51 terminase small subunit head and packaging -1 44331 44789
YP_009125628.1 NC_026599_p60 tail fiber protein phrog_5795 tail protein tail -1 36051 36698
YP_009125631.1 NC_026599_p63 hypothetical protein phrog_2941 virion structural protein head and packaging -1 37122 37748
YP_009125569.1 NC_026599_p1 hypothetical protein phrog_26227 unknown function unknown function 1 886 1032
YP_009125590.1 NC_026599_p22 hypothetical protein phrog_4877 unknown function unknown function 1 9284 9853
YP_009125618.1 NC_026599_p50 hypothetical protein phrog_12822 unknown function unknown function 1 25742 25930
YP_009125606.1 NC_026599_p38 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 18700 20337
YP_009125627.1 NC_026599_p59 hypothetical protein phrog_3287 virion structural protein head and packaging -1 34501 36042
YP_009125632.1 NC_026599_p64 hypothetical protein phrog_3982 unknown function unknown function -1 37752 38072
YP_009125571.1 NC_026599_p3 hypothetical protein phrog_30176 unknown function unknown function 1 1604 1747
YP_009125601.1 NC_026599_p33 hypothetical protein phrog_9813 unknown function unknown function 1 17300 17491
YP_009125594.1 NC_026599_p26 hypothetical protein phrog_2599 ribosomal protein S6 glutaminyl transferase moron, auxiliary metabolic gene and host takeover 1 12910 13794
YP_009125613.1 NC_026599_p45 hypothetical protein phrog_14437 endonuclease DNA, RNA and nucleotide metabolism 1 23983 24222
YP_009125580.1 NC_026599_p12 hypothetical protein singleton unknown function unknown function -1 4072 4224
YP_009125608.1 NC_026599_p40 hypothetical protein phrog_5033 endolysin; inhibits RNA polymerase lysis 1 21047 21442
YP_009125579.1 NC_026599_p11 hypothetical protein phrog_9861 unknown function unknown function 1 3634 3867
YP_009125600.1 NC_026599_p32 hypothetical protein phrog_12255 unknown function unknown function 1 17086 17319
YP_009125621.1 NC_026599_p53 hypothetical protein phrog_6958 virion structural protein head and packaging -1 27245 30412
YP_009125623.1 NC_026599_p55 hypothetical protein phrog_27875 unknown function unknown function -1 32102 32332
YP_009125575.1 NC_026599_p7 hypothetical protein phrog_29615 unknown function unknown function 1 2773 3021
YP_009125617.1 NC_026599_p49 hypothetical protein phrog_8402 unknown function unknown function 1 25391 25597
YP_009125591.1 NC_026599_p23 hypothetical protein phrog_7631 amidoligase enzyme other 1 9829 11004
YP_009125587.1 NC_026599_p19 hypothetical protein phrog_9504 unknown function unknown function 1 6554 7516
YP_009125584.1 NC_026599_p16 hypothetical protein phrog_23984 unknown function unknown function 1 5280 5498
YP_009125609.1 NC_026599_p41 hypothetical protein phrog_8565 unknown function unknown function 1 21414 21698
YP_009125589.1 NC_026599_p21 hypothetical protein phrog_3815 COOH.NH2 ligase other 1 8491 9291
YP_009125603.1 NC_026599_p35 holin phrog_7045 holin lysis 1 17633 17917
YP_009125612.1 NC_026599_p44 hypothetical protein phrog_7967 unknown function unknown function 1 23037 24020
YP_009125602.1 NC_026599_p34 hypothetical protein phrog_9555 unknown function unknown function 1 17481 17642
YP_009125576.1 NC_026599_p8 hypothetical protein phrog_16829 unknown function unknown function 1 3035 3190
YP_009125598.1 NC_026599_p30 DNA polymerase phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 16263 16772
YP_009125596.1 NC_026599_p28 hypothetical protein phrog_8197 unknown function unknown function 1 14192 14569
YP_009125615.1 NC_026599_p47 hypothetical protein phrog_9960 unknown function unknown function 1 24973 25191
YP_009125638.1 NC_026599_p70 baseplate hub protein phrog_7 endolysin lysis -1 43901 44299
YP_009125624.1 NC_026599_p56 hypothetical protein phrog_7477 unknown function unknown function -1 32462 33403
YP_009125636.1 NC_026599_p68 portal protein phrog_1216 portal protein head and packaging -1 40333 42453
YP_009125588.1 NC_026599_p20 hypothetical protein phrog_7973 unknown function unknown function 1 7535 8494
YP_009125635.1 NC_026599_p67 hypothetical protein phrog_8161 unknown function unknown function -1 40088 40330
YP_009125611.1 NC_026599_p43 5'-3' exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 22232 23062
YP_009125620.1 NC_026599_p52 hypothetical protein phrog_8295 virion structural protein head and packaging -1 26346 27233
YP_009125570.1 NC_026599_p2 hypothetical protein phrog_1448 unknown function unknown function 1 1050 1604
YP_009125582.1 NC_026599_p14 hypothetical protein phrog_11110 unknown function unknown function 1 4841 5053
YP_009125637.1 NC_026599_p69 terminase, large subunit phrog_2 terminase large subunit head and packaging -1 42453 43901
YP_009125592.1 NC_026599_p24 L-glutamine-D-fructose-6-phosphate amidotransferase phrog_4736 L-glutamine-D-fructose-6-phosphate aminotransferase other 1 11016 12548
YP_009125586.1 NC_026599_p18 hypothetical protein phrog_23893 unknown function unknown function 1 6344 6472
YP_009125595.1 NC_026599_p27 hypothetical protein phrog_2520 gamma-glutamyl cyclotransferase moron, auxiliary metabolic gene and host takeover 1 13794 14192
YP_009125573.1 NC_026599_p5 hypothetical protein phrog_10887 unknown function unknown function 1 2031 2171
YP_009125597.1 NC_026599_p29 DNA primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 14570 16279
YP_009125593.1 NC_026599_p25 hypothetical protein phrog_9335 unknown function unknown function 1 12558 12779
YP_009125610.1 NC_026599_p42 endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 21698 22147
YP_009125583.1 NC_026599_p15 hypothetical protein phrog_29336 unknown function unknown function 1 5055 5273