Genomic map of Pseudomonas phage vB_PaeS_PAO1_Ab30 (NC_026601)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_026601
Definition
Pseudomonas phage vB_PaeS_PAO1_Ab30, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Casadabanvirus; unclassified Casadabanvirus.
DB of origin
REFSEQ
Length
37238
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
59
%GC
64.07
Number of singletons
2
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009125680.1 NC_026601_p41 major capsid protein phrog_371 major head protein head and packaging 1 20877 21791
YP_009125691.1 NC_026601_p52 serine--glyoxylate aminotransferase phrog_1082 tail assembly protein tail 1 30236 31939
YP_009125686.1 NC_026601_p47 hypothetical protein phrog_807 major tail protein with Ig-like domain tail 1 23449 24219
YP_009125683.1 NC_026601_p44 hypothetical protein phrog_195 head-tail adaptor connector 1 22363 22779
YP_009125653.1 NC_026601_p14 hypothetical protein phrog_4367 unknown function unknown function 1 8248 8556
YP_009125641.1 NC_026601_p2 DNA-binding protein phrog_769 transcriptional repressor transcription regulation 1 1103 1459
YP_009125663.1 NC_026601_p24 capsid and scaffold protein phrog_873 endolysin head and packaging 1 11392 11808
YP_009125645.1 NC_026601_p6 A transposase phrog_310 transposase integration and excision 1 2694 4691
YP_009125675.1 NC_026601_p36 hypothetical protein phrog_8786 type I-E anti-CRISPR protein moron, auxiliary metabolic gene and host takeover 1 18849 19046
YP_009125643.1 NC_026601_p4 hypothetical protein phrog_8647 unknown function unknown function 1 1896 2222
YP_009125665.1 NC_026601_p26 hypothetical protein phrog_2975 Rz-like spanin lysis 1 12047 12448
YP_009125659.1 NC_026601_p20 hypothetical protein phrog_286 unknown function unknown function 1 9684 10091
YP_009125648.1 NC_026601_p9 hypothetical protein phrog_3190 unknown function unknown function 1 6198 6827
YP_009125697.1 NC_026601_p58 hypothetical protein phrog_2432 unknown function unknown function 1 36561 36848
YP_009125692.1 NC_026601_p53 FAD/FMN-containing dehydrogenase phrog_778 tail assembly protein tail 1 31929 32750
YP_009125651.1 NC_026601_p12 hypothetical protein phrog_2043 unknown function unknown function 1 7322 7615
YP_009125650.1 NC_026601_p11 hypothetical protein phrog_2119 unknown function unknown function 1 6928 7341
YP_009125654.1 NC_026601_p15 hypothetical protein phrog_1518 host nuclease inhibitor moron, auxiliary metabolic gene and host takeover 1 8559 8840
YP_009125662.1 NC_026601_p23 hypothetical protein phrog_1024 unknown function unknown function 1 10970 11392
YP_009125647.1 NC_026601_p8 hypothetical protein phrog_2030 transcriptional regulator transcription regulation 1 5455 6120
YP_009125690.1 NC_026601_p51 hypothetical protein phrog_687 structural protein head and packaging 1 29313 30236
YP_009125661.1 NC_026601_p22 hypothetical protein phrog_3648 unknown function unknown function 1 10630 10977
YP_009125674.1 NC_026601_p35 capsid and scaffold protein phrog_26 tail completion or Neck1 protein connector 1 18271 18738
YP_009125671.1 NC_026601_p32 hypothetical protein phrog_38 terminase large subunit head and packaging 1 13743 15395
YP_009125679.1 NC_026601_p40 protease (I) and scaffold (Z) protein phrog_328 head maturation protease head and packaging 1 19776 20873
YP_009125642.1 NC_026601_p3 hypothetical protein phrog_2345 transcriptional regulator transcription regulation 1 1462 1896
YP_009125646.1 NC_026601_p7 DNA transposition protein phrog_296 DNA transposition protein integration and excision 1 4706 5458
YP_009125656.1 NC_026601_p17 hypothetical protein singleton unknown function unknown function 1 9051 9167
YP_009125640.1 NC_026601_p1 c repressor phrog_4 transcriptional repressor transcription regulation -1 203 862
YP_009125696.1 NC_026601_p57 hypothetical protein phrog_2875 virion structural protein head and packaging 1 35407 36558
YP_009125657.1 NC_026601_p18 hypothetical protein singleton unknown function unknown function 1 9171 9320
YP_009125677.1 NC_026601_p38 hypothetical protein phrog_3865 unknown function unknown function 1 19332 19556
YP_009125668.1 NC_026601_p29 DNA-binding protein phrog_756 DNA binding protein DNA, RNA and nucleotide metabolism 1 12756 13256
YP_009125649.1 NC_026601_p10 hypothetical protein phrog_3765 unknown function unknown function 1 6812 6928
YP_009125684.1 NC_026601_p45 hypothetical protein phrog_209 portal protein head and packaging 1 22776 23249
YP_009125652.1 NC_026601_p13 hypothetical protein phrog_846 unknown function unknown function 1 7629 8246
YP_009125660.1 NC_026601_p21 integral membrane protein phrog_836 late transcriptional activator transcription regulation 1 10078 10527
YP_009125685.1 NC_026601_p46 hypothetical protein phrog_3129 unknown function unknown function 1 23237 23416
YP_009125670.1 NC_026601_p31 hypothetical protein phrog_14530 unknown function unknown function -1 13461 13712
YP_009125693.1 NC_026601_p54 hypothetical protein phrog_1180 tail assembly chaperone tail 1 32759 32998
YP_009125687.1 NC_026601_p48 hypothetical protein phrog_1442 tail assembly chaperone tail 1 24223 24717
YP_009125694.1 NC_026601_p55 hypothetical protein phrog_1196 tail assembly chaperone tail 1 32995 33213
YP_009125658.1 NC_026601_p19 hypothetical protein phrog_4093 unknown function unknown function 1 9391 9687
YP_009125698.1 NC_026601_p59 hypothetical protein phrog_2623 unknown function unknown function 1 36927 37151
YP_009125655.1 NC_026601_p16 hypothetical protein phrog_3223 unknown function unknown function 1 8842 9048
YP_009125669.1 NC_026601_p30 hypothetical protein phrog_13614 unknown function unknown function 1 13256 13507
YP_009125689.1 NC_026601_p50 hypothetical protein phrog_687 structural protein head and packaging 1 28355 29311
YP_009125695.1 NC_026601_p56 hypothetical protein phrog_1101 tail protein tail 1 33203 35410
YP_009125644.1 NC_026601_p5 hypothetical protein phrog_4468 unknown function unknown function 1 2375 2629
YP_009125666.1 NC_026601_p27 hypothetical protein phrog_8661 unknown function unknown function 1 12441 12554
YP_009125672.1 NC_026601_p33 portal protein phrog_113 portal protein head and packaging 1 15405 16985
YP_009125681.1 NC_026601_p42 hypothetical protein phrog_4833 unknown function unknown function 1 21858 22199
YP_009125676.1 NC_026601_p37 hypothetical protein phrog_9769 type I-F anti-CRISPR protein moron, auxiliary metabolic gene and host takeover 1 19043 19345
YP_009125673.1 NC_026601_p34 morphogenesis protein phrog_220 minor head protein and DNA pilot head and packaging 1 16985 18271
YP_009125667.1 NC_026601_p28 hypothetical protein phrog_1103 unknown function unknown function 1 12559 12747
YP_009125682.1 NC_026601_p43 hypothetical protein phrog_3376 unknown function unknown function 1 22199 22366
YP_009125678.1 NC_026601_p39 hypothetical protein phrog_10291 unknown function unknown function -1 19652 19777
YP_009125688.1 NC_026601_p49 tail length tape-measure protein phrog_2335 tail length tape measure protein tail 1 24866 28348
YP_009125664.1 NC_026601_p25 hypothetical protein phrog_4057 unknown function unknown function 1 11808 12050