| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_026601 |
Definition |
Pseudomonas phage vB_PaeS_PAO1_Ab30, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Casadabanvirus; unclassified Casadabanvirus. |
DB of origin |
REFSEQ |
Length |
37238 |
Host Name |
Pseudomonas aeruginosa |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
59 |
%GC |
64.07 |
Number of singletons |
2 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009125680.1 | NC_026601_p41 | major capsid protein | phrog_371 | major head protein | head and packaging | 1 | 20877 | 21791 |
| YP_009125691.1 | NC_026601_p52 | serine--glyoxylate aminotransferase | phrog_1082 | tail assembly protein | tail | 1 | 30236 | 31939 |
| YP_009125686.1 | NC_026601_p47 | hypothetical protein | phrog_807 | major tail protein with Ig-like domain | tail | 1 | 23449 | 24219 |
| YP_009125683.1 | NC_026601_p44 | hypothetical protein | phrog_195 | head-tail adaptor | connector | 1 | 22363 | 22779 |
| YP_009125653.1 | NC_026601_p14 | hypothetical protein | phrog_4367 | unknown function | unknown function | 1 | 8248 | 8556 |
| YP_009125641.1 | NC_026601_p2 | DNA-binding protein | phrog_769 | transcriptional repressor | transcription regulation | 1 | 1103 | 1459 |
| YP_009125663.1 | NC_026601_p24 | capsid and scaffold protein | phrog_873 | endolysin | head and packaging | 1 | 11392 | 11808 |
| YP_009125645.1 | NC_026601_p6 | A transposase | phrog_310 | transposase | integration and excision | 1 | 2694 | 4691 |
| YP_009125675.1 | NC_026601_p36 | hypothetical protein | phrog_8786 | type I-E anti-CRISPR protein | moron, auxiliary metabolic gene and host takeover | 1 | 18849 | 19046 |
| YP_009125643.1 | NC_026601_p4 | hypothetical protein | phrog_8647 | unknown function | unknown function | 1 | 1896 | 2222 |
| YP_009125665.1 | NC_026601_p26 | hypothetical protein | phrog_2975 | Rz-like spanin | lysis | 1 | 12047 | 12448 |
| YP_009125659.1 | NC_026601_p20 | hypothetical protein | phrog_286 | unknown function | unknown function | 1 | 9684 | 10091 |
| YP_009125648.1 | NC_026601_p9 | hypothetical protein | phrog_3190 | unknown function | unknown function | 1 | 6198 | 6827 |
| YP_009125697.1 | NC_026601_p58 | hypothetical protein | phrog_2432 | unknown function | unknown function | 1 | 36561 | 36848 |
| YP_009125692.1 | NC_026601_p53 | FAD/FMN-containing dehydrogenase | phrog_778 | tail assembly protein | tail | 1 | 31929 | 32750 |
| YP_009125651.1 | NC_026601_p12 | hypothetical protein | phrog_2043 | unknown function | unknown function | 1 | 7322 | 7615 |
| YP_009125650.1 | NC_026601_p11 | hypothetical protein | phrog_2119 | unknown function | unknown function | 1 | 6928 | 7341 |
| YP_009125654.1 | NC_026601_p15 | hypothetical protein | phrog_1518 | host nuclease inhibitor | moron, auxiliary metabolic gene and host takeover | 1 | 8559 | 8840 |
| YP_009125662.1 | NC_026601_p23 | hypothetical protein | phrog_1024 | unknown function | unknown function | 1 | 10970 | 11392 |
| YP_009125647.1 | NC_026601_p8 | hypothetical protein | phrog_2030 | transcriptional regulator | transcription regulation | 1 | 5455 | 6120 |
| YP_009125690.1 | NC_026601_p51 | hypothetical protein | phrog_687 | structural protein | head and packaging | 1 | 29313 | 30236 |
| YP_009125661.1 | NC_026601_p22 | hypothetical protein | phrog_3648 | unknown function | unknown function | 1 | 10630 | 10977 |
| YP_009125674.1 | NC_026601_p35 | capsid and scaffold protein | phrog_26 | tail completion or Neck1 protein | connector | 1 | 18271 | 18738 |
| YP_009125671.1 | NC_026601_p32 | hypothetical protein | phrog_38 | terminase large subunit | head and packaging | 1 | 13743 | 15395 |
| YP_009125679.1 | NC_026601_p40 | protease (I) and scaffold (Z) protein | phrog_328 | head maturation protease | head and packaging | 1 | 19776 | 20873 |
| YP_009125642.1 | NC_026601_p3 | hypothetical protein | phrog_2345 | transcriptional regulator | transcription regulation | 1 | 1462 | 1896 |
| YP_009125646.1 | NC_026601_p7 | DNA transposition protein | phrog_296 | DNA transposition protein | integration and excision | 1 | 4706 | 5458 |
| YP_009125656.1 | NC_026601_p17 | hypothetical protein | singleton | unknown function | unknown function | 1 | 9051 | 9167 |
| YP_009125640.1 | NC_026601_p1 | c repressor | phrog_4 | transcriptional repressor | transcription regulation | -1 | 203 | 862 |
| YP_009125696.1 | NC_026601_p57 | hypothetical protein | phrog_2875 | virion structural protein | head and packaging | 1 | 35407 | 36558 |
| YP_009125657.1 | NC_026601_p18 | hypothetical protein | singleton | unknown function | unknown function | 1 | 9171 | 9320 |
| YP_009125677.1 | NC_026601_p38 | hypothetical protein | phrog_3865 | unknown function | unknown function | 1 | 19332 | 19556 |
| YP_009125668.1 | NC_026601_p29 | DNA-binding protein | phrog_756 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 12756 | 13256 |
| YP_009125649.1 | NC_026601_p10 | hypothetical protein | phrog_3765 | unknown function | unknown function | 1 | 6812 | 6928 |
| YP_009125684.1 | NC_026601_p45 | hypothetical protein | phrog_209 | portal protein | head and packaging | 1 | 22776 | 23249 |
| YP_009125652.1 | NC_026601_p13 | hypothetical protein | phrog_846 | unknown function | unknown function | 1 | 7629 | 8246 |
| YP_009125660.1 | NC_026601_p21 | integral membrane protein | phrog_836 | late transcriptional activator | transcription regulation | 1 | 10078 | 10527 |
| YP_009125685.1 | NC_026601_p46 | hypothetical protein | phrog_3129 | unknown function | unknown function | 1 | 23237 | 23416 |
| YP_009125670.1 | NC_026601_p31 | hypothetical protein | phrog_14530 | unknown function | unknown function | -1 | 13461 | 13712 |
| YP_009125693.1 | NC_026601_p54 | hypothetical protein | phrog_1180 | tail assembly chaperone | tail | 1 | 32759 | 32998 |
| YP_009125687.1 | NC_026601_p48 | hypothetical protein | phrog_1442 | tail assembly chaperone | tail | 1 | 24223 | 24717 |
| YP_009125694.1 | NC_026601_p55 | hypothetical protein | phrog_1196 | tail assembly chaperone | tail | 1 | 32995 | 33213 |
| YP_009125658.1 | NC_026601_p19 | hypothetical protein | phrog_4093 | unknown function | unknown function | 1 | 9391 | 9687 |
| YP_009125698.1 | NC_026601_p59 | hypothetical protein | phrog_2623 | unknown function | unknown function | 1 | 36927 | 37151 |
| YP_009125655.1 | NC_026601_p16 | hypothetical protein | phrog_3223 | unknown function | unknown function | 1 | 8842 | 9048 |
| YP_009125669.1 | NC_026601_p30 | hypothetical protein | phrog_13614 | unknown function | unknown function | 1 | 13256 | 13507 |
| YP_009125689.1 | NC_026601_p50 | hypothetical protein | phrog_687 | structural protein | head and packaging | 1 | 28355 | 29311 |
| YP_009125695.1 | NC_026601_p56 | hypothetical protein | phrog_1101 | tail protein | tail | 1 | 33203 | 35410 |
| YP_009125644.1 | NC_026601_p5 | hypothetical protein | phrog_4468 | unknown function | unknown function | 1 | 2375 | 2629 |
| YP_009125666.1 | NC_026601_p27 | hypothetical protein | phrog_8661 | unknown function | unknown function | 1 | 12441 | 12554 |
| YP_009125672.1 | NC_026601_p33 | portal protein | phrog_113 | portal protein | head and packaging | 1 | 15405 | 16985 |
| YP_009125681.1 | NC_026601_p42 | hypothetical protein | phrog_4833 | unknown function | unknown function | 1 | 21858 | 22199 |
| YP_009125676.1 | NC_026601_p37 | hypothetical protein | phrog_9769 | type I-F anti-CRISPR protein | moron, auxiliary metabolic gene and host takeover | 1 | 19043 | 19345 |
| YP_009125673.1 | NC_026601_p34 | morphogenesis protein | phrog_220 | minor head protein and DNA pilot | head and packaging | 1 | 16985 | 18271 |
| YP_009125667.1 | NC_026601_p28 | hypothetical protein | phrog_1103 | unknown function | unknown function | 1 | 12559 | 12747 |
| YP_009125682.1 | NC_026601_p43 | hypothetical protein | phrog_3376 | unknown function | unknown function | 1 | 22199 | 22366 |
| YP_009125678.1 | NC_026601_p39 | hypothetical protein | phrog_10291 | unknown function | unknown function | -1 | 19652 | 19777 |
| YP_009125688.1 | NC_026601_p49 | tail length tape-measure protein | phrog_2335 | tail length tape measure protein | tail | 1 | 24866 | 28348 |
| YP_009125664.1 | NC_026601_p25 | hypothetical protein | phrog_4057 | unknown function | unknown function | 1 | 11808 | 12050 |