Genomic map of Pseudomonas phage vB_PaeP_PAO1_Ab05 (NC_026602)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_026602
Definition
Pseudomonas phage vB_PaeP_PAO1_Ab05, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Krylovirinae; Phikmvvirus; Pseudomonas virus Ab05.
DB of origin
REFSEQ
Length
43639
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
54
%GC
62.34
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009125747.1 NC_026602_p49 hypothetical protein phrog_6597 holin lysis 1 41383 41580
YP_009125706.1 NC_026602_p8 hypothetical protein phrog_8496 unknown function unknown function 1 4218 4397
YP_009125740.1 NC_026602_p42 internal (core) protein phrog_342 internal virion protein with endolysin domain head and packaging 1 32525 36538
YP_009125727.1 NC_026602_p29 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 18249 18617
YP_009125707.1 NC_026602_p9 hypothetical protein phrog_4342 unknown function unknown function 1 4397 4684
YP_009125721.1 NC_026602_p23 hypothetical protein phrog_7292 unknown function unknown function 1 12079 12297
YP_009125710.1 NC_026602_p12 tail fiber protein phrog_5433 unknown function unknown function 1 5305 5724
YP_009125748.1 NC_026602_p50 endolysin phrog_7 endolysin lysis 1 41577 42059
YP_009125719.1 NC_026602_p21 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 10751 11698
YP_009125711.1 NC_026602_p13 hypothetical protein phrog_6915 unknown function unknown function 1 5793 6152
YP_009125749.1 NC_026602_p51 hypothetical protein phrog_214 Rz-like spanin lysis 1 42017 42346
YP_009125699.1 NC_026602_p1 hypothetical protein phrog_5722 unknown function unknown function 1 1909 2193
YP_009125733.1 NC_026602_p35 head-tail connector protein phrog_449 head-tail adaptor connector 1 22582 24114
YP_009125703.1 NC_026602_p5 hypothetical protein phrog_6951 unknown function unknown function 1 3457 3825
YP_009125725.1 NC_026602_p27 endonuclease phrog_423 endonuclease VII DNA, RNA and nucleotide metabolism 1 16756 17196
YP_009125743.1 NC_026602_p45 tail fiber protein phrog_4176 tail fiber protein tail 1 37746 38654
YP_009125702.1 NC_026602_p4 hypothetical protein phrog_12691 unknown function unknown function 1 3256 3378
YP_009125724.1 NC_026602_p26 5'-3' exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 15825 16766
YP_009125738.1 NC_026602_p40 internal (core) protein phrog_805 internal virion protein head and packaging 1 29280 29825
YP_009125730.1 NC_026602_p32 hypothetical protein phrog_6575 unknown function unknown function 1 21605 21856
YP_009125728.1 NC_026602_p30 hypothetical protein phrog_18213 unknown function unknown function 1 18614 18985
YP_009125731.1 NC_026602_p33 diguanylate cyclase/phosphodiesterase phrog_3986 unknown function unknown function 1 21853 22329
YP_009125723.1 NC_026602_p25 hypothetical protein phrog_862 unknown function unknown function 1 14776 15825
YP_009125715.1 NC_026602_p17 hypothetical protein phrog_9768 unknown function unknown function 1 7887 8015
YP_009125742.1 NC_026602_p44 hypothetical protein phrog_8874 tail fiber protein tail 1 37295 37753
YP_009125704.1 NC_026602_p6 hypothetical protein phrog_7027 unknown function unknown function 1 3812 4039
YP_009125751.1 NC_026602_p53 hypothetical protein phrog_6908 minor head protein head and packaging 1 42437 42850
YP_009125708.1 NC_026602_p10 hypothetical protein phrog_4955 unknown function unknown function 1 4681 4917
YP_009125700.1 NC_026602_p2 hypothetical protein phrog_7124 unknown function unknown function 1 2193 2420
YP_009125744.1 NC_026602_p46 tail fiber protein phrog_4950 tail fiber protein tail 1 38658 39263
YP_009125722.1 NC_026602_p24 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 12294 14720
YP_009125701.1 NC_026602_p3 hypothetical protein phrog_1448 unknown function unknown function 1 2431 2970
YP_009125745.1 NC_026602_p47 terminase, small subunit phrog_891 terminase small subunit head and packaging 1 39263 39568
YP_009125750.1 NC_026602_p52 hypothetical protein phrog_21506 Rz-like spanin lysis 1 42321 42434
YP_009125737.1 NC_026602_p39 tail tubular protein B phrog_457 tail protein tail 1 26800 29280
YP_009125739.1 NC_026602_p41 lysozyme phrog_2083 internal virion lysozyme motif head and packaging 1 29825 32521
YP_009125713.1 NC_026602_p15 hypothetical protein singleton unknown function unknown function -1 7126 7362
YP_009125732.1 NC_026602_p34 hypothetical protein phrog_3112 virion structural protein head and packaging 1 22295 22570
YP_009125720.1 NC_026602_p22 hypothetical protein phrog_19207 unknown function unknown function 1 11695 11979
YP_009125729.1 NC_026602_p31 RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 18994 21444
YP_009125718.1 NC_026602_p20 hypothetical protein phrog_1614 nucleotidyltransferase DNA, RNA and nucleotide metabolism 1 10134 10751
YP_009125734.1 NC_026602_p36 capsid and scaffold protein phrog_1018 head scaffolding protein head and packaging 1 24118 25086
YP_009125752.1 NC_026602_p54 hypothetical protein phrog_7171 minor head protein head and packaging 1 42869 43063
YP_009125705.1 NC_026602_p7 hypothetical protein phrog_21702 unknown function unknown function 1 4036 4221
YP_009125746.1 NC_026602_p48 terminase, large subunit phrog_38 terminase large subunit head and packaging 1 39578 41383
YP_009125714.1 NC_026602_p16 hypothetical protein phrog_2563 unknown function unknown function 1 7355 7897
YP_009125716.1 NC_026602_p18 DNA primase/helicase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 8083 8907
YP_009125726.1 NC_026602_p28 exonuclease phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 17193 18239
YP_009125735.1 NC_026602_p37 major capsid protein phrog_267 major head protein head and packaging 1 25139 26146
YP_009125709.1 NC_026602_p11 hypothetical protein phrog_4342 unknown function unknown function 1 4933 5226
YP_009125712.1 NC_026602_p14 DNA-binding protein phrog_6982 DNA polymerase DNA, RNA and nucleotide metabolism 1 6155 7093
YP_009125717.1 NC_026602_p19 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 8876 10144
YP_009125736.1 NC_026602_p38 tail tubular protein A phrog_446 tail protein tail 1 26243 26797
YP_009125741.1 NC_026602_p43 tail fiber protein phrog_6953 tail fiber protein tail 1 36540 37295