| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_026603 |
Definition |
Mycobacterium phage Keshu, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus. |
DB of origin |
REFSEQ |
Length |
61251 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
101 |
%GC |
67.25 |
Number of singletons |
2 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009125830.1 | NC_026603_p78 | hypothetical protein | phrog_1338 | unknown function | unknown function | 1 | 50490 | 50765 |
| YP_009125766.1 | NC_026603_p14 | hypothetical protein | phrog_763 | head-tail adaptor | connector | 1 | 9370 | 9723 |
| YP_009125787.1 | NC_026603_p35 | hypothetical protein | phrog_1738 | unknown function | unknown function | 1 | 28970 | 29221 |
| YP_009125849.1 | NC_026603_p97 | hypothetical protein | phrog_6135 | unknown function | unknown function | 1 | 58622 | 58888 |
| YP_009125813.1 | NC_026603_p61 | hypothetical protein | phrog_2870 | unknown function | unknown function | 1 | 41169 | 41477 |
| YP_009125837.1 | NC_026603_p85 | hypothetical protein | phrog_7731 | unknown function | unknown function | 1 | 53794 | 54183 |
| YP_009125823.1 | NC_026603_p71 | hypothetical protein | phrog_1571 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 44440 | 44811 |
| YP_009125790.1 | NC_026603_p38 | hypothetical protein | phrog_16894 | unknown function | unknown function | 1 | 30616 | 30792 |
| YP_009125792.1 | NC_026603_p40 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31375 | 31497 |
| YP_009125812.1 | NC_026603_p60 | hypothetical protein | phrog_2596 | unknown function | unknown function | 1 | 40903 | 41172 |
| YP_009125804.1 | NC_026603_p52 | hypothetical protein | phrog_2654 | unknown function | unknown function | 1 | 37053 | 37220 |
| YP_009125834.1 | NC_026603_p82 | hypothetical protein | phrog_6045 | unknown function | unknown function | 1 | 52241 | 52633 |
| YP_009125807.1 | NC_026603_p55 | WhiB | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 37986 | 38255 |
| YP_009125767.1 | NC_026603_p15 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 9704 | 9988 |
| YP_009125826.1 | NC_026603_p74 | hypothetical protein | phrog_3478 | unknown function | unknown function | 1 | 48544 | 48984 |
| YP_009125755.1 | NC_026603_p3 | hypothetical protein | phrog_14141 | unknown function | unknown function | 1 | 394 | 549 |
| YP_009125801.1 | NC_026603_p49 | HTH domain protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 36154 | 36366 |
| YP_009125828.1 | NC_026603_p76 | peptidase | phrog_908 | unknown function | unknown function | 1 | 49138 | 50055 |
| YP_009125795.1 | NC_026603_p43 | hypothetical protein | phrog_658 | unknown function | unknown function | -1 | 31980 | 32282 |
| YP_009125780.1 | NC_026603_p28 | minor tail protein | phrog_416 | minor tail protein | tail | 1 | 23942 | 24964 |
| YP_009125831.1 | NC_026603_p79 | hypothetical protein | phrog_7658 | unknown function | unknown function | 1 | 50883 | 51152 |
| YP_009125773.1 | NC_026603_p21 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 16443 | 17579 |
| YP_009125786.1 | NC_026603_p34 | hypothetical protein | phrog_3413 | unknown function | unknown function | 1 | 28626 | 28973 |
| YP_009125783.1 | NC_026603_p31 | lysin A | phrog_317 | endolysin | lysis | 1 | 25708 | 27387 |
| YP_009125851.1 | NC_026603_p99 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 60197 | 60424 |
| YP_009125762.1 | NC_026603_p10 | hypothetical protein | phrog_1757 | unknown function | unknown function | 1 | 7012 | 7212 |
| YP_009125774.1 | NC_026603_p22 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 17579 | 19342 |
| YP_009125765.1 | NC_026603_p13 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 8987 | 9370 |
| YP_009125793.1 | NC_026603_p41 | hypothetical protein | phrog_11692 | unknown function | unknown function | 1 | 31494 | 31685 |
| YP_009125771.1 | NC_026603_p19 | tail assembly chaperone | phrog_1861 | unknown function | unknown function | 1 | 11346 | 11774 |
| YP_009125820.1 | NC_026603_p68 | hypothetical protein | phrog_2388 | unknown function | unknown function | 1 | 43390 | 43506 |
| YP_009125775.1 | NC_026603_p23 | minor tail protein | phrog_1697 | minor tail protein | tail | 1 | 19342 | 19854 |
| YP_009125815.1 | NC_026603_p63 | hypothetical protein | phrog_3492 | unknown function | unknown function | 1 | 42370 | 42546 |
| YP_009125840.1 | NC_026603_p88 | hypothetical protein | phrog_2822 | unknown function | unknown function | 1 | 55022 | 55489 |
| YP_009125838.1 | NC_026603_p86 | hypothetical protein | phrog_14052 | unknown function | unknown function | 1 | 54180 | 54716 |
| YP_009125806.1 | NC_026603_p54 | hypothetical protein | phrog_2286 | unknown function | unknown function | 1 | 37312 | 37989 |
| YP_009125759.1 | NC_026603_p7 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 1473 | 2897 |
| YP_009125798.1 | NC_026603_p46 | hypothetical protein | phrog_950 | unknown function | unknown function | -1 | 34336 | 35253 |
| YP_009125833.1 | NC_026603_p81 | SprT-like protein | phrog_1006 | unknown function | unknown function | 1 | 51550 | 52113 |
| YP_009125824.1 | NC_026603_p72 | DNA primase | phrog_2478 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 44854 | 47466 |
| YP_009125816.1 | NC_026603_p64 | hypothetical protein | phrog_8427 | unknown function | unknown function | 1 | 42548 | 42739 |
| YP_009125846.1 | NC_026603_p94 | hypothetical protein | singleton | unknown function | unknown function | 1 | 57235 | 57363 |
| YP_009125850.1 | NC_026603_p98 | hypothetical protein | phrog_4095 | unknown function | unknown function | 1 | 59072 | 59770 |
| YP_009125802.1 | NC_026603_p50 | HTH DNA binding protein | phrog_2908 | unknown function | unknown function | 1 | 36370 | 36747 |
| YP_009125848.1 | NC_026603_p96 | hypothetical protein | phrog_16846 | unknown function | unknown function | 1 | 58326 | 58574 |
| YP_009125847.1 | NC_026603_p95 | hypothetical protein | phrog_2433 | unknown function | unknown function | 1 | 57373 | 58212 |
| YP_009125809.1 | NC_026603_p57 | hypothetical protein | phrog_3186 | unknown function | unknown function | 1 | 39634 | 40044 |
| YP_009125799.1 | NC_026603_p47 | hypothetical protein | phrog_1746 | transcriptional repressor | transcription regulation | -1 | 35282 | 35704 |
| YP_009125785.1 | NC_026603_p33 | holin | phrog_565 | holin | lysis | 1 | 28183 | 28629 |
| YP_009125758.1 | NC_026603_p6 | terminase small subunit | phrog_1459 | terminase small subunit | head and packaging | 1 | 1259 | 1489 |
| YP_009125845.1 | NC_026603_p93 | hypothetical protein | phrog_12202 | unknown function | unknown function | 1 | 57116 | 57238 |
| YP_009125781.1 | NC_026603_p29 | hypothetical protein | phrog_2269 | unknown function | unknown function | 1 | 24981 | 25244 |
| YP_009125788.1 | NC_026603_p36 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 29208 | 30341 |
| YP_009125794.1 | NC_026603_p42 | hypothetical protein | phrog_9364 | unknown function | unknown function | 1 | 31745 | 31930 |
| YP_009125764.1 | NC_026603_p12 | capsid protein | phrog_10 | major head protein | head and packaging | 1 | 7945 | 8868 |
| YP_009125777.1 | NC_026603_p25 | hypothetical protein | phrog_1736 | minor tail protein | tail | 1 | 21006 | 21314 |
| YP_009125829.1 | NC_026603_p77 | hypothetical protein | phrog_549 | unknown function | unknown function | 1 | 50098 | 50493 |
| YP_009125800.1 | NC_026603_p48 | hypothetical protein | phrog_1702 | transcriptional repressor | transcription regulation | 1 | 35918 | 36157 |
| YP_009125782.1 | NC_026603_p30 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 25333 | 25689 |
| YP_009125817.1 | NC_026603_p65 | hypothetical protein | phrog_5466 | unknown function | unknown function | 1 | 42736 | 43011 |
| YP_009125835.1 | NC_026603_p83 | hypothetical protein | phrog_7536 | unknown function | unknown function | 1 | 52731 | 52916 |
| YP_009125810.1 | NC_026603_p58 | hypothetical protein | phrog_1956 | unknown function | unknown function | 1 | 40041 | 40337 |
| YP_009125754.1 | NC_026603_p2 | hypothetical protein | phrog_2293 | unknown function | unknown function | 1 | 191 | 412 |
| YP_009125772.1 | NC_026603_p20 | tapemeasure | phrog_971 | endolysin | lysis | 1 | 12188 | 16348 |
| YP_009125779.1 | NC_026603_p27 | hypothetical protein | phrog_3901 | unknown function | unknown function | 1 | 23655 | 23942 |
| YP_009125825.1 | NC_026603_p73 | RusA-like protein | phrog_3055 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 47865 | 48551 |
| YP_009125832.1 | NC_026603_p80 | hypothetical protein | phrog_5546 | unknown function | unknown function | 1 | 51207 | 51419 |
| YP_009125842.1 | NC_026603_p90 | hypothetical protein | phrog_15782 | unknown function | unknown function | 1 | 56069 | 56380 |
| YP_009125836.1 | NC_026603_p84 | hypothetical protein | phrog_2342 | unknown function | unknown function | 1 | 52913 | 53797 |
| YP_009125797.1 | NC_026603_p45 | hypothetical protein | phrog_8155 | unknown function | unknown function | 1 | 33926 | 34261 |
| YP_009125784.1 | NC_026603_p32 | lysin B | phrog_102 | endolysin | lysis | 1 | 27384 | 28172 |
| YP_009125757.1 | NC_026603_p5 | hypothetical protein | phrog_2622 | unknown function | unknown function | 1 | 1065 | 1259 |
| YP_009125760.1 | NC_026603_p8 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2908 | 4476 |
| YP_009125761.1 | NC_026603_p9 | capsid maturation protease | phrog_1752 | head maturation protease | head and packaging | 1 | 4415 | 7015 |
| YP_009125822.1 | NC_026603_p70 | NrdH | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 44135 | 44440 |
| YP_009125819.1 | NC_026603_p67 | hypothetical protein | phrog_542 | unknown function | unknown function | 1 | 43220 | 43390 |
| YP_009125753.1 | NC_026603_p1 | hypothetical protein | phrog_5391 | unknown function | unknown function | 1 | 51 | 194 |
| YP_009125852.1 | NC_026603_p100 | hypothetical protein | phrog_15061 | unknown function | unknown function | 1 | 60438 | 60896 |
| YP_009125768.1 | NC_026603_p16 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 9985 | 10416 |
| YP_009125814.1 | NC_026603_p62 | hypothetical protein | phrog_1674 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 41474 | 42373 |
| YP_009125756.1 | NC_026603_p4 | hypothetical protein | phrog_19409 | unknown function | unknown function | 1 | 634 | 990 |
| YP_009125789.1 | NC_026603_p37 | hypothetical protein | phrog_1042 | unknown function | unknown function | 1 | 30338 | 30577 |
| YP_009125821.1 | NC_026603_p69 | hypothetical protein | phrog_1911 | unknown function | unknown function | 1 | 43586 | 44104 |
| YP_009125769.1 | NC_026603_p17 | major tail protein | phrog_117 | major tail protein | tail | 1 | 10564 | 11175 |
| YP_009125763.1 | NC_026603_p11 | scaffolding protein | phrog_1793 | head scaffolding protein | head and packaging | 1 | 7324 | 7872 |
| YP_009125818.1 | NC_026603_p66 | hypothetical protein | phrog_1581 | unknown function | unknown function | 1 | 43008 | 43220 |
| YP_009125843.1 | NC_026603_p91 | hypothetical protein | phrog_2074 | unknown function | unknown function | 1 | 56377 | 56640 |
| YP_009125844.1 | NC_026603_p92 | hypothetical protein | phrog_4560 | unknown function | unknown function | 1 | 56859 | 57116 |
| YP_009125803.1 | NC_026603_p51 | hypothetical protein | phrog_6733 | unknown function | unknown function | 1 | 36829 | 37056 |
| YP_009125805.1 | NC_026603_p53 | hypothetical protein | phrog_33569 | unknown function | unknown function | 1 | 37217 | 37315 |
| YP_009125791.1 | NC_026603_p39 | hypothetical protein | phrog_2311 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 30941 | 31378 |
| YP_009125827.1 | NC_026603_p75 | hypothetical protein | phrog_15207 | unknown function | unknown function | 1 | 48981 | 49145 |
| YP_009125853.1 | NC_026603_p101 | HNH endonuclease domain protein | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 60898 | 61185 |
| YP_009125839.1 | NC_026603_p87 | hypothetical protein | phrog_666 | unknown function | unknown function | 1 | 54731 | 54919 |
| YP_009125776.1 | NC_026603_p24 | minor tail protein | phrog_1565 | minor tail protein | tail | 1 | 19903 | 20991 |
| YP_009125841.1 | NC_026603_p89 | hypothetical protein | phrog_2493 | unknown function | unknown function | 1 | 55479 | 56072 |
| YP_009125796.1 | NC_026603_p44 | integrase | phrog_1 | integrase | integration and excision | 1 | 32647 | 33933 |
| YP_009125811.1 | NC_026603_p59 | DnaQ | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 40349 | 40906 |
| YP_009125778.1 | NC_026603_p26 | minor tail protein | phrog_746 | minor tail protein | tail | 1 | 21307 | 23655 |
| YP_009125808.1 | NC_026603_p56 | hypothetical protein | phrog_2781 | unknown function | unknown function | 1 | 38252 | 39637 |
| YP_009125770.1 | NC_026603_p18 | tail assembly chaperone | phrog_1326 | tail assembly chaperone | tail | 1 | 11346 | 12184 |