| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_026604 |
Definition |
Mycobacterium phage Cerasum, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus. |
DB of origin |
REFSEQ |
Length |
53636 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
102 |
%GC |
61.49 |
Number of singletons |
1 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009125901.1 | NC_026604_p48 | hypothetical protein | phrog_3381 | unknown function | unknown function | 1 | 33383 | 33559 |
| YP_009125939.1 | NC_026604_p86 | hypothetical protein | phrog_2278 | unknown function | unknown function | 1 | 47519 | 47677 |
| YP_009125859.1 | NC_026604_p6 | scaffolding protein | phrog_4638 | head scaffolding protein | head and packaging | 1 | 4408 | 4944 |
| YP_009125912.1 | NC_026604_p59 | hypothetical protein | phrog_2060 | DNA methyltransferase | other | 1 | 37393 | 37734 |
| YP_009125863.1 | NC_026604_p10 | hypothetical protein | phrog_1929 | head-tail connector protein | connector | 1 | 6631 | 6957 |
| YP_009125909.1 | NC_026604_p56 | WhiB | phrog_1333 | unknown function | unknown function | 1 | 36364 | 37011 |
| YP_009125867.1 | NC_026604_p14 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 8383 | 8934 |
| YP_009125902.1 | NC_026604_p49 | hypothetical protein | phrog_1797 | unknown function | unknown function | 1 | 33556 | 34179 |
| YP_009125944.1 | NC_026604_p91 | hypothetical protein | phrog_1467 | unknown function | unknown function | 1 | 48851 | 49522 |
| YP_009125937.1 | NC_026604_p84 | hypothetical protein | phrog_1545 | unknown function | unknown function | 1 | 47159 | 47296 |
| YP_009125920.1 | NC_026604_p67 | hypothetical protein | singleton | unknown function | unknown function | 1 | 42544 | 42723 |
| YP_009125931.1 | NC_026604_p78 | hypothetical protein | phrog_1900 | mobile element MPME | moron, auxiliary metabolic gene and host takeover | 1 | 45802 | 46140 |
| YP_009125938.1 | NC_026604_p85 | hypothetical protein | phrog_5186 | unknown function | unknown function | 1 | 47293 | 47466 |
| YP_009125877.1 | NC_026604_p24 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 22110 | 22331 |
| YP_009125883.1 | NC_026604_p30 | hypothetical protein | phrog_2004 | unknown function | unknown function | 1 | 25370 | 25603 |
| YP_009125933.1 | NC_026604_p80 | hypothetical protein | phrog_4152 | unknown function | unknown function | 1 | 46374 | 46502 |
| YP_009125855.1 | NC_026604_p2 | terminase small subunit | phrog_4479 | terminase small subunit | head and packaging | 1 | 445 | 699 |
| YP_009125918.1 | NC_026604_p65 | hypothetical protein | phrog_2704 | unknown function | unknown function | 1 | 42259 | 42408 |
| YP_009125913.1 | NC_026604_p60 | hypothetical protein | phrog_5168 | unknown function | unknown function | 1 | 37731 | 38195 |
| YP_009125953.1 | NC_026604_p100 | polypeptide-N-acetylgalactosaminyltransferase | phrog_1579 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 51291 | 52727 |
| YP_009125905.1 | NC_026604_p52 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 34832 | 35179 |
| YP_009125928.1 | NC_026604_p75 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 44945 | 45229 |
| YP_009125904.1 | NC_026604_p51 | hypothetical protein | phrog_1849 | unknown function | unknown function | 1 | 34554 | 34835 |
| YP_009125906.1 | NC_026604_p53 | WhiB | phrog_1333 | unknown function | unknown function | 1 | 35176 | 35673 |
| YP_009125862.1 | NC_026604_p9 | head-to-tail connector protein | phrog_763 | head-tail adaptor | connector | 1 | 6295 | 6624 |
| YP_009125878.1 | NC_026604_p25 | hypothetical protein | phrog_5492 | unknown function | unknown function | 1 | 22328 | 22501 |
| YP_009125923.1 | NC_026604_p70 | hypothetical protein | phrog_6275 | unknown function | unknown function | 1 | 43696 | 44076 |
| YP_009125942.1 | NC_026604_p89 | hypothetical protein | phrog_6194 | unknown function | unknown function | 1 | 48215 | 48292 |
| YP_009125948.1 | NC_026604_p95 | hypothetical protein | phrog_11849 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 50230 | 50382 |
| YP_009125914.1 | NC_026604_p61 | RecA | phrog_1366 | unknown function | unknown function | 1 | 38192 | 39169 |
| YP_009125943.1 | NC_026604_p90 | GIY-YIG endonuclease | phrog_3312 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 48315 | 48854 |
| YP_009125925.1 | NC_026604_p72 | hypothetical protein | phrog_1573 | DNA methyltransferase | other | 1 | 44267 | 44644 |
| YP_009125870.1 | NC_026604_p17 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 14635 | 16344 |
| YP_009125951.1 | NC_026604_p98 | hypothetical protein | phrog_1385 | unknown function | unknown function | 1 | 50878 | 51120 |
| YP_009125955.1 | NC_026604_p102 | glycosyltransferase | phrog_854 | glucosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 52933 | 53544 |
| YP_009125879.1 | NC_026604_p26 | lysin A | phrog_700 | endolysin | lysis | 1 | 22498 | 23733 |
| YP_009125921.1 | NC_026604_p68 | hypothetical protein | phrog_2447 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 42723 | 43436 |
| YP_009125908.1 | NC_026604_p55 | HTH DNA binding protein | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 36014 | 36367 |
| YP_009125869.1 | NC_026604_p16 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 12868 | 14577 |
| YP_009125930.1 | NC_026604_p77 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 45563 | 45805 |
| YP_009125868.1 | NC_026604_p15 | tapemeasure | phrog_1942 | tail length tape measure protein | tail | 1 | 9337 | 12867 |
| YP_009125881.1 | NC_026604_p28 | holin | phrog_443 | holin | lysis | 1 | 24741 | 24974 |
| YP_009125917.1 | NC_026604_p64 | hypothetical protein | phrog_7443 | unknown function | unknown function | 1 | 42041 | 42262 |
| YP_009125876.1 | NC_026604_p23 | hypothetical protein | phrog_1172 | unknown function | unknown function | 1 | 21863 | 22039 |
| YP_009125929.1 | NC_026604_p76 | hypothetical protein | phrog_2021 | unknown function | unknown function | 1 | 45222 | 45566 |
| YP_009125910.1 | NC_026604_p57 | hypothetical protein | phrog_2078 | unknown function | unknown function | 1 | 37011 | 37166 |
| YP_009125874.1 | NC_026604_p21 | hypothetical protein | phrog_6030 | unknown function | unknown function | 1 | 21241 | 21480 |
| YP_009125894.1 | NC_026604_p41 | CRO protein | phrog_6463 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 30520 | 30843 |
| YP_009125947.1 | NC_026604_p94 | hypothetical protein | phrog_1694 | unknown function | unknown function | 1 | 50048 | 50233 |
| YP_009125898.1 | NC_026604_p45 | hypothetical protein | phrog_2025 | unknown function | unknown function | 1 | 32637 | 32849 |
| YP_009125889.1 | NC_026604_p36 | hypothetical protein | phrog_2437 | unknown function | unknown function | -1 | 27361 | 27528 |
| YP_009125873.1 | NC_026604_p20 | hypothetical protein | phrog_416 | minor tail protein | tail | 1 | 20087 | 21244 |
| YP_009125903.1 | NC_026604_p50 | hypothetical protein | phrog_8015 | unknown function | unknown function | 1 | 34197 | 34478 |
| YP_009125927.1 | NC_026604_p74 | hypothetical protein | phrog_1311 | unknown function | unknown function | 1 | 44805 | 44948 |
| YP_009125945.1 | NC_026604_p92 | hypothetical protein | phrog_15959 | unknown function | unknown function | 1 | 49563 | 49832 |
| YP_009125950.1 | NC_026604_p97 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 50468 | 50881 |
| YP_009125893.1 | NC_026604_p40 | immunity repressor | phrog_2838 | transcriptional repressor | transcription regulation | -1 | 29820 | 30353 |
| YP_009125926.1 | NC_026604_p73 | hypothetical protein | phrog_33993 | unknown function | unknown function | 1 | 44641 | 44808 |
| YP_009125949.1 | NC_026604_p96 | hypothetical protein | phrog_22734 | unknown function | unknown function | 1 | 50379 | 50471 |
| YP_009125891.1 | NC_026604_p38 | integrase | phrog_1 | integrase | integration and excision | 1 | 27921 | 29039 |
| YP_009125900.1 | NC_026604_p47 | hypothetical protein | phrog_1816 | unknown function | unknown function | 1 | 33195 | 33386 |
| YP_009125890.1 | NC_026604_p37 | hypothetical protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | -1 | 27512 | 27655 |
| YP_009125875.1 | NC_026604_p22 | minor tail protein | phrog_240 | head protein | head and packaging | 1 | 21480 | 21863 |
| YP_009125865.1 | NC_026604_p12 | major tail subunit | phrog_476 | major tail protein | tail | 1 | 7460 | 8269 |
| YP_009125907.1 | NC_026604_p54 | HTH DNA binding protein | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 35670 | 36017 |
| YP_009125919.1 | NC_026604_p66 | hypothetical protein | phrog_2070 | unknown function | unknown function | 1 | 42405 | 42554 |
| YP_009125936.1 | NC_026604_p83 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 46980 | 47159 |
| YP_009125932.1 | NC_026604_p79 | hypothetical protein | phrog_10032 | unknown function | unknown function | 1 | 46153 | 46377 |
| YP_009125861.1 | NC_026604_p8 | head-to-tail connector protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 5927 | 6298 |
| YP_009125892.1 | NC_026604_p39 | hypothetical protein | phrog_1948 | unknown function | unknown function | -1 | 29102 | 29587 |
| YP_009125897.1 | NC_026604_p44 | hypothetical protein | phrog_5253 | unknown function | unknown function | 1 | 32341 | 32640 |
| YP_009125946.1 | NC_026604_p93 | hypothetical protein | phrog_6481 | unknown function | unknown function | 1 | 49839 | 50048 |
| YP_009125885.1 | NC_026604_p32 | hypothetical protein | phrog_1791 | unknown function | unknown function | 1 | 26427 | 26717 |
| YP_009125857.1 | NC_026604_p4 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2199 | 3620 |
| YP_009125899.1 | NC_026604_p46 | Xis | phrog_1840 | excisionase | integration and excision | 1 | 32938 | 33198 |
| YP_009125887.1 | NC_026604_p34 | hypothetical protein | phrog_21631 | unknown function | unknown function | -1 | 26908 | 27177 |
| YP_009125866.1 | NC_026604_p13 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 8383 | 9319 |
| YP_009125935.1 | NC_026604_p82 | hypothetical protein | phrog_6540 | unknown function | unknown function | 1 | 46687 | 46983 |
| YP_009125858.1 | NC_026604_p5 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 3604 | 4329 |
| YP_009125911.1 | NC_026604_p58 | hypothetical protein | phrog_1834 | unknown function | unknown function | 1 | 37166 | 37396 |
| YP_009125888.1 | NC_026604_p35 | hypothetical protein | phrog_3693 | unknown function | unknown function | -1 | 27170 | 27361 |
| YP_009125952.1 | NC_026604_p99 | hypothetical protein | phrog_2057 | unknown function | unknown function | 1 | 51113 | 51274 |
| YP_009125916.1 | NC_026604_p63 | DNA helicase/methylase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 39525 | 42044 |
| YP_009125915.1 | NC_026604_p62 | HNH endonuclease | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 39166 | 39528 |
| YP_009125922.1 | NC_026604_p69 | hypothetical protein | phrog_2080 | unknown function | unknown function | 1 | 43436 | 43699 |
| YP_009125872.1 | NC_026604_p19 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 17226 | 20090 |
| YP_009125954.1 | NC_026604_p101 | hypothetical protein | phrog_1693 | unknown function | unknown function | 1 | 52724 | 52936 |
| YP_009125941.1 | NC_026604_p88 | hypothetical protein | phrog_2247 | unknown function | unknown function | 1 | 47955 | 48218 |
| YP_009125871.1 | NC_026604_p18 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 16399 | 17229 |
| YP_009125854.1 | NC_026604_p1 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 41 | 373 |
| YP_009125856.1 | NC_026604_p3 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 671 | 2158 |
| YP_009125934.1 | NC_026604_p81 | hypothetical protein | phrog_1901 | unknown function | unknown function | 1 | 46499 | 46690 |
| YP_009125884.1 | NC_026604_p31 | Dna-Q like exonuclease | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 25590 | 26411 |
| YP_009125860.1 | NC_026604_p7 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 5007 | 5915 |
| YP_009125880.1 | NC_026604_p27 | lysin B | phrog_102 | endolysin | lysis | 1 | 23733 | 24731 |
| YP_009125886.1 | NC_026604_p33 | hypothetical protein | phrog_1839 | unknown function | unknown function | 1 | 26710 | 26802 |
| YP_009125895.1 | NC_026604_p42 | DNA damage inducible protein D-like protein | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 30900 | 31766 |
| YP_009125924.1 | NC_026604_p71 | hypothetical protein | phrog_1943 | unknown function | unknown function | 1 | 44076 | 44270 |
| YP_009125864.1 | NC_026604_p11 | hypothetical protein | phrog_813 | head-tail adaptor | connector | 1 | 6947 | 7351 |
| YP_009125940.1 | NC_026604_p87 | hypothetical protein | phrog_10123 | unknown function | unknown function | 1 | 47674 | 47958 |
| YP_009125896.1 | NC_026604_p43 | HTH domain DNA binding protein | phrog_14857 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 31763 | 32344 |
| YP_009125882.1 | NC_026604_p29 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 24971 | 25345 |