Genomic map of Mycobacterium phage Malithi (NC_026605)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_026605
Definition
Mycobacterium phage Malithi, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pclasvirinae; Fishburnevirus.
DB of origin
REFSEQ
Length
46869
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
79
%GC
67.09
Number of singletons
0
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009126005.1 NC_026605_p50 RusA-like protein phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 34847 35350
YP_009125999.1 NC_026605_p44 hypothetical protein phrog_11260 unknown function unknown function 1 31265 31387
YP_009126011.1 NC_026605_p56 methyltransferase phrog_8769 methyltransferase other 1 37944 38147
YP_009125967.1 NC_026605_p12 hypothetical protein phrog_2325 minor tail protein tail 1 7935 8348
YP_009125993.1 NC_026605_p38 hypothetical protein phrog_658 unknown function unknown function 1 29723 30226
YP_009126026.1 NC_026605_p71 hypothetical protein phrog_2202 unknown function unknown function 1 44156 44482
YP_009125963.1 NC_026605_p8 head-to-tail connector complex protein phrog_137 head-tail adaptor Ad1 connector 1 6592 6954
YP_009125982.1 NC_026605_p27 lysin B phrog_102 endolysin lysis 1 23977 25143
YP_009125985.2 NC_026605_p30 integrase phrog_1 integrase integration and excision -1 25843 26799
YP_009126023.1 NC_026605_p68 hypothetical protein phrog_10505 unknown function unknown function 1 43049 43231
YP_009125972.1 NC_026605_p17 tape measure protein phrog_2337 tail length tape measure protein tail 1 10918 14568
YP_009126029.1 NC_026605_p74 hypothetical protein phrog_4738 transcriptional repressor transcription regulation 1 44849 45022
YP_009125974.1 NC_026605_p19 minor tail protein phrog_110 minor tail protein tail 1 16310 18046
YP_009126004.1 NC_026605_p49 FtsK-like protein phrog_6152 unknown function unknown function 1 33783 34850
YP_009125957.1 NC_026605_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 413 2089
YP_009125975.1 NC_026605_p20 minor tail protein phrog_732 minor tail protein tail 1 18069 18962
YP_009126033.1 NC_026605_p78 hypothetical protein phrog_7285 unknown function unknown function 1 46025 46273
YP_009126024.1 NC_026605_p69 hypothetical protein phrog_5855 unknown function unknown function 1 43304 43804
YP_009125969.1 NC_026605_p14 major tail protein phrog_476 major tail protein tail 1 8874 9872
YP_009125960.1 NC_026605_p5 scaffolding protein phrog_673 head scaffolding protein head and packaging 1 4892 5257
YP_009126017.1 NC_026605_p62 hypothetical protein phrog_2447 replication initiation protein DNA, RNA and nucleotide metabolism 1 39826 40836
YP_009125983.1 NC_026605_p28 hypothetical protein phrog_443 holin lysis 1 25165 25413
YP_009125965.1 NC_026605_p10 hypothetical protein phrog_2322 head-tail connector protein connector 1 7320 7673
YP_009125968.1 NC_026605_p13 head-to-tail connector complex protein phrog_813 head-tail adaptor connector 1 8345 8782
YP_009125997.1 NC_026605_p42 hypothetical protein phrog_5559 unknown function unknown function 1 30997 31176
YP_009125956.1 NC_026605_p1 terminase small subunit phrog_1496 terminase small subunit head and packaging 1 55 444
YP_009125998.1 NC_026605_p43 hypothetical protein phrog_5806 unknown function unknown function 1 31173 31304
YP_009126012.1 NC_026605_p57 DNA methylase phrog_2060 DNA methyltransferase other 1 38149 38589
YP_009125970.1 NC_026605_p15 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 9986 10904
YP_009126000.1 NC_026605_p45 hypothetical protein phrog_4702 unknown function unknown function 1 31384 31536
YP_009125988.1 NC_026605_p33 hypothetical protein phrog_1622 unknown function unknown function 1 27629 27865
YP_009125980.1 NC_026605_p25 hypothetical protein phrog_1172 unknown function unknown function 1 22801 22974
YP_009126025.1 NC_026605_p70 hypothetical protein phrog_7429 unknown function unknown function 1 43880 44092
YP_009126019.1 NC_026605_p64 hypothetical protein phrog_7254 unknown function unknown function 1 41360 41599
YP_009126018.1 NC_026605_p63 hypothetical protein phrog_3599 unknown function unknown function 1 40833 41363
YP_009126007.1 NC_026605_p52 hypothetical protein phrog_3821 unknown function unknown function 1 35583 35861
YP_009125964.1 NC_026605_p9 head-to-tail connector complex protein phrog_6553 head closure Hc1 connector 1 6954 7304
YP_009126030.1 NC_026605_p75 hypothetical protein phrog_18286 unknown function unknown function 1 45231 45419
YP_009125984.1 NC_026605_p29 hypothetical protein phrog_404 minor tail protein tail 1 25410 25769
YP_009126031.1 NC_026605_p76 hypothetical protein phrog_6617 unknown function unknown function 1 45416 45673
YP_009125976.1 NC_026605_p21 minor tail protein phrog_3493 minor tail protein tail 1 18963 21224
YP_009125977.1 NC_026605_p22 minor tail protein phrog_416 minor tail protein tail 1 21221 22261
YP_009125971.1 NC_026605_p16 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 9986 10585
YP_009125978.1 NC_026605_p23 hypothetical protein phrog_6374 unknown function unknown function 1 22276 22425
YP_009126016.1 NC_026605_p61 hypothetical protein phrog_2451 unknown function unknown function 1 39664 39822
YP_009125959.1 NC_026605_p4 capsid maturation protease phrog_2976 head maturation protease head and packaging 1 3551 4888
YP_009125979.1 NC_026605_p24 hypothetical protein phrog_240 head protein head and packaging 1 22442 22804
YP_009125962.1 NC_026605_p7 hypothetical protein phrog_2322 head-tail connector protein connector 1 6238 6588
YP_009126014.1 NC_026605_p59 hypothetical protein phrog_5921 unknown function unknown function 1 39172 39318
YP_009126003.1 NC_026605_p48 hypothetical protein phrog_4387 unknown function unknown function 1 33448 33786
YP_009126028.1 NC_026605_p73 hypothetical protein phrog_10254 unknown function unknown function 1 44649 44840
YP_009125987.1 NC_026605_p32 DNA binding domain protein phrog_66 excisionase and transcriptional regulator integration and excision 1 27399 27632
YP_009126034.1 NC_026605_p79 hypothetical protein phrog_1808 HNH endonuclease DNA, RNA and nucleotide metabolism 1 46278 46661
YP_009126015.1 NC_026605_p60 hypothetical protein phrog_11096 unknown function unknown function 1 39419 39691
YP_009126021.1 NC_026605_p66 hypothetical protein phrog_18047 unknown function unknown function 1 42545 42790
YP_009126009.1 NC_026605_p54 hypothetical protein phrog_25269 unknown function unknown function 1 37044 37832
YP_009126032.1 NC_026605_p77 hypothetical protein phrog_1186 unknown function unknown function 1 45670 46038
YP_009125958.1 NC_026605_p3 portal protein phrog_113 portal protein head and packaging 1 2106 3560
YP_009125990.1 NC_026605_p35 hypothetical protein phrog_3507 unknown function unknown function 1 28725 29024
YP_009126001.1 NC_026605_p46 RecE phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism 1 31533 32462
YP_009125986.1 NC_026605_p31 immunity repressor phrog_2328 transcriptional repressor transcription regulation -1 26800 27270
YP_009125994.1 NC_026605_p39 hypothetical protein phrog_4656 unknown function unknown function 1 30226 30459
YP_009126006.1 NC_026605_p51 hypothetical protein phrog_6109 unknown function unknown function 1 35344 35586
YP_009125996.1 NC_026605_p41 hypothetical protein phrog_5803 unknown function unknown function 1 30728 31000
YP_009126013.1 NC_026605_p58 HTH binding domain protein phrog_7170 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 38586 39179
YP_009126022.1 NC_026605_p67 hypothetical protein phrog_2074 unknown function unknown function 1 42795 43049
YP_009125966.1 NC_026605_p11 hypothetical protein phrog_4307 unknown function unknown function 1 7666 7935
YP_009125992.1 NC_026605_p37 hypothetical protein phrog_5015 unknown function unknown function 1 29266 29661
YP_009126027.1 NC_026605_p72 hypothetical protein phrog_4550 unknown function unknown function 1 44479 44652
YP_009125981.1 NC_026605_p26 lysin A phrog_6707 endolysin lysis 1 23045 23980
YP_009125991.1 NC_026605_p36 hypothetical protein phrog_9041 unknown function unknown function 1 29021 29269
YP_009125989.1 NC_026605_p34 antirepressor phrog_130 anti-repressor Ant transcription regulation 1 27862 28728
YP_009125973.1 NC_026605_p18 minor tail protein phrog_106 minor tail protein tail 1 14565 16310
YP_009126008.1 NC_026605_p53 DNA methylase phrog_67 DNA methyltransferase other 1 35858 37051
YP_009126020.1 NC_026605_p65 hypothetical protein phrog_908 unknown function unknown function 1 41622 42524
YP_009125961.1 NC_026605_p6 capsid protein phrog_1650 major head protein head and packaging 1 5294 6238
YP_009126010.1 NC_026605_p55 hypothetical protein phrog_7789 unknown function unknown function 1 37832 37921
YP_009126002.1 NC_026605_p47 RecT phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 32459 33451
YP_009125995.1 NC_026605_p40 hypothetical protein phrog_4981 unknown function unknown function 1 30456 30731