| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_026611 |
Definition |
Edwardsiella phage GF-2 DNA, complete sequence. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Gofduovirus; Edwardsiella virus GF2. |
DB of origin |
REFSEQ |
Length |
43129 |
Host Name |
Edwardsiella |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
82 |
%GC |
51.26 |
Number of singletons |
18 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009126660.1 | NC_026611_p57 | hypothetical protein | singleton | unknown function | unknown function | 1 | 32097 | 32213 |
| YP_009126684.1 | NC_026611_p81 | hypothetical protein | phrog_4772 | unknown function | unknown function | 1 | 42568 | 42819 |
| YP_009126663.1 | NC_026611_p60 | puative prophage anti-repressor | phrog_3 | transcriptional repressor | transcription regulation | 1 | 33505 | 33708 |
| YP_009126607.1 | NC_026611_p4 | head protein | phrog_324 | head morphogenesis | head and packaging | 1 | 3361 | 4125 |
| YP_009126622.1 | NC_026611_p19 | hypothetical protein | phrog_12129 | unknown function | unknown function | 1 | 13563 | 13805 |
| YP_009126626.1 | NC_026611_p23 | antirepressor protein Ant | phrog_245 | anti-repressor Ant | transcription regulation | 1 | 15003 | 15878 |
| YP_009126664.1 | NC_026611_p61 | regulatory protein CII | phrog_191 | CII-like transcriptional activator | transcription regulation | 1 | 33819 | 34109 |
| YP_009126681.1 | NC_026611_p78 | lysozyme | phrog_7 | endolysin | lysis | 1 | 40746 | 41186 |
| YP_009126673.1 | NC_026611_p70 | DNA-binding protein Roi | phrog_63 | anti-repressor Ant | transcription regulation | 1 | 37323 | 38033 |
| YP_009126672.1 | NC_026611_p69 | hypothetical protein | phrog_25166 | unknown function | unknown function | 1 | 37109 | 37330 |
| YP_009126608.1 | NC_026611_p5 | hypothetical protein | phrog_38256 | unknown function | unknown function | 1 | 4217 | 4387 |
| YP_009126658.1 | NC_026611_p55 | collagen-like protein | singleton | unknown function | unknown function | -1 | 30525 | 31571 |
| YP_009126619.1 | NC_026611_p16 | hypothetical protein | phrog_1932 | tail assembly chaperone | tail | 1 | 11231 | 11644 |
| YP_009126654.1 | NC_026611_p51 | hypothetical protein | singleton | unknown function | unknown function | -1 | 28827 | 28943 |
| YP_009126624.1 | NC_026611_p21 | regulator protein Arc-like DNA binding domain | phrog_7906 | Arc-like transcriptional regulator | transcription regulation | -1 | 14482 | 14751 |
| YP_009126670.1 | NC_026611_p67 | hypothetical protein | phrog_16975 | unknown function | unknown function | 1 | 36503 | 36883 |
| YP_009126620.1 | NC_026611_p17 | hypothetical protein | singleton | unknown function | unknown function | 1 | 11713 | 11859 |
| YP_009126659.1 | NC_026611_p56 | anti-termination protein N | phrog_271 | anti-termination protein N-like | transcription regulation | -1 | 31573 | 31812 |
| YP_009126604.1 | NC_026611_p1 | terminase small subunit | phrog_1206 | terminase small subunit | head and packaging | 1 | 1 | 600 |
| YP_009126667.1 | NC_026611_p64 | hypothetical protein | singleton | unknown function | unknown function | 1 | 35778 | 35900 |
| YP_009126631.1 | NC_026611_p28 | hypothetical protein | phrog_120 | baseplate wedge subunit | tail | 1 | 18632 | 18976 |
| YP_009126635.1 | NC_026611_p32 | tail assembly chaperone | phrog_188 | tail fiber assembly protein | tail | 1 | 21601 | 21951 |
| YP_009126629.1 | NC_026611_p26 | hypothetical protein | phrog_196 | baseplate hub | tail | 1 | 17044 | 17895 |
| YP_009126616.1 | NC_026611_p13 | hypothetical protein | phrog_1876 | unknown function | unknown function | 1 | 8786 | 9295 |
| YP_009126678.1 | NC_026611_p75 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39093 | 39239 |
| YP_009126679.1 | NC_026611_p76 | antitermination protein Q | phrog_943 | anti-termination protein Q-like | transcription regulation | 1 | 39226 | 39750 |
| YP_009126653.1 | NC_026611_p50 | hypothetical protein | phrog_11519 | unknown function | unknown function | -1 | 28591 | 28830 |
| YP_009126615.1 | NC_026611_p12 | hypothetical protein | phrog_1912 | head protein | head and packaging | 1 | 8418 | 8789 |
| YP_009126665.1 | NC_026611_p62 | DNA replication protein O | phrog_391 | replication initiation O-like | DNA, RNA and nucleotide metabolism | 1 | 34168 | 35010 |
| YP_009126655.1 | NC_026611_p52 | CIII protein | phrog_550 | CIII anti-termination | transcription regulation | -1 | 28940 | 29077 |
| YP_009126638.1 | NC_026611_p35 | hypothetical protein | singleton | unknown function | unknown function | -1 | 23670 | 23789 |
| YP_009126639.1 | NC_026611_p36 | hypothetical protein | phrog_303 | unknown function | unknown function | -1 | 23779 | 23976 |
| YP_009126661.1 | NC_026611_p58 | hypothetical protein | singleton | unknown function | unknown function | -1 | 32264 | 32668 |
| YP_009126634.1 | NC_026611_p31 | tail fiber protein | phrog_12796 | tail fiber protein | tail | 1 | 20840 | 21604 |
| YP_009126637.1 | NC_026611_p34 | integrase | phrog_1 | integrase | integration and excision | -1 | 22316 | 23479 |
| YP_009126676.1 | NC_026611_p73 | recombination endonuclease | phrog_171 | NinG/ Rap DNA junction specific endonuclease | DNA, RNA and nucleotide metabolism | 1 | 38384 | 38989 |
| YP_009126683.1 | NC_026611_p80 | hypothetical protein | phrog_1030 | tail needle knob | tail | 1 | 42162 | 42560 |
| YP_009126609.1 | NC_026611_p6 | hypothetical protein | phrog_2229 | head maturation protease | head and packaging | 1 | 4442 | 5701 |
| YP_009126614.1 | NC_026611_p11 | hypothetical protein | phrog_222 | tail completion or Neck1 protein | connector | 1 | 7970 | 8443 |
| YP_009126618.1 | NC_026611_p15 | hypothetical protein | phrog_1964 | virion structural protein | head and packaging | 1 | 10797 | 11231 |
| YP_009126682.1 | NC_026611_p79 | hypothetical protein | phrog_312 | Rz-like spanin | lysis | 1 | 41168 | 41695 |
| YP_009126650.1 | NC_026611_p47 | hypothetical protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 27519 | 27917 |
| YP_009126613.1 | NC_026611_p10 | hypothetical protein | phrog_302 | virion structural protein | head and packaging | 1 | 7572 | 7973 |
| YP_009126649.1 | NC_026611_p46 | hypothetical protein | singleton | unknown function | unknown function | -1 | 27251 | 27511 |
| YP_009126656.1 | NC_026611_p53 | hypothetical protein | phrog_1376 | unknown function | unknown function | -1 | 29108 | 30034 |
| YP_009126625.1 | NC_026611_p22 | regulator protein Arc-like DNA binding domain | phrog_582 | Arc-like repressor | transcription regulation | 1 | 14852 | 15013 |
| YP_009126651.1 | NC_026611_p48 | recombination protein | phrog_2324 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 27914 | 28507 |
| YP_009126657.1 | NC_026611_p54 | hypothetical protein | singleton | unknown function | unknown function | -1 | 30039 | 30431 |
| YP_009126646.1 | NC_026611_p43 | hypothetical protein | phrog_874 | unknown function | unknown function | -1 | 25663 | 26436 |
| YP_009126685.1 | NC_026611_p82 | hypothetical protein | singleton | unknown function | unknown function | 1 | 42828 | 43037 |
| YP_009126632.1 | NC_026611_p29 | hypothetical protein | phrog_6 | baseplate wedge subunit | tail | 1 | 18973 | 20199 |
| YP_009126640.1 | NC_026611_p37 | hypothetical protein | phrog_33085 | unknown function | unknown function | -1 | 23960 | 24184 |
| YP_009126668.1 | NC_026611_p65 | hypothetical protein | singleton | unknown function | unknown function | 1 | 35897 | 36217 |
| YP_009126610.1 | NC_026611_p7 | hypothetical protein | phrog_2122 | minor head protein | head and packaging | 1 | 5711 | 6199 |
| YP_009126623.1 | NC_026611_p20 | hypothetical protein | phrog_3983 | unknown function | unknown function | -1 | 13970 | 14485 |
| YP_009126648.1 | NC_026611_p45 | hypothetical protein | phrog_25300 | unknown function | unknown function | -1 | 26912 | 27247 |
| YP_009126644.1 | NC_026611_p41 | EaI protein | phrog_8222 | unknown function | unknown function | -1 | 25163 | 25351 |
| YP_009126612.1 | NC_026611_p9 | hypothetical protein | phrog_2085 | unknown function | unknown function | 1 | 7245 | 7571 |
| YP_009126647.1 | NC_026611_p44 | hypothetical protein | phrog_492 | unknown function | unknown function | -1 | 26433 | 26915 |
| YP_009126617.1 | NC_026611_p14 | hypothetical protein | phrog_205 | tail sheath | tail | 1 | 9299 | 10786 |
| YP_009126633.1 | NC_026611_p30 | hypothetical protein | phrog_587 | structural protein | head and packaging | 1 | 20196 | 20837 |
| YP_009126677.1 | NC_026611_p74 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38977 | 39093 |
| YP_009126642.1 | NC_026611_p39 | hypothetical protein | phrog_1852 | unknown function | unknown function | -1 | 24531 | 24755 |
| YP_009126611.1 | NC_026611_p8 | capsid protein | phrog_264 | major head protein | head and packaging | 1 | 6199 | 7233 |
| YP_009126605.1 | NC_026611_p2 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 575 | 1948 |
| YP_009126606.1 | NC_026611_p3 | portal protein | phrog_146 | portal protein | head and packaging | 1 | 1950 | 3395 |
| YP_009126680.1 | NC_026611_p77 | hypothetical protein | phrog_31287 | unknown function | unknown function | 1 | 40126 | 40749 |
| YP_009126666.1 | NC_026611_p63 | DNA replication protein P | phrog_109 | P-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 35007 | 35693 |
| YP_009126645.1 | NC_026611_p42 | hypothetical protein | singleton | unknown function | unknown function | -1 | 25353 | 25661 |
| YP_009126641.1 | NC_026611_p38 | hypothetical protein | phrog_444 | unknown function | unknown function | -1 | 24181 | 24531 |
| YP_009126652.1 | NC_026611_p49 | hypothetical protein | singleton | unknown function | unknown function | -1 | 28482 | 28637 |
| YP_009126621.1 | NC_026611_p18 | transglycosylase | phrog_2013 | lytic tail protein | tail | 1 | 11856 | 13562 |
| YP_009126636.1 | NC_026611_p33 | hypothetical protein | singleton | unknown function | unknown function | 1 | 21961 | 22131 |
| YP_009126674.1 | NC_026611_p71 | hypothetical protein | phrog_676 | unknown function | unknown function | 1 | 38030 | 38185 |
| YP_009126675.1 | NC_026611_p72 | hypothetical protein | phrog_1212 | unknown function | unknown function | 1 | 38185 | 38382 |
| YP_009126669.1 | NC_026611_p66 | hypothetical protein | singleton | unknown function | unknown function | 1 | 36220 | 36429 |
| YP_009126643.1 | NC_026611_p40 | hypothetical protein | phrog_660 | unknown function | unknown function | -1 | 24752 | 25159 |
| YP_009126671.1 | NC_026611_p68 | hypothetical protein | singleton | unknown function | unknown function | 1 | 36876 | 37049 |
| YP_009126628.1 | NC_026611_p25 | structural protein | phrog_349 | virion structural protein | head and packaging | 1 | 16749 | 17051 |
| YP_009126662.1 | NC_026611_p59 | prophage repressor CI | phrog_4 | transcriptional repressor | transcription regulation | -1 | 32746 | 33399 |
| YP_009126630.1 | NC_026611_p27 | baseplate protein | phrog_11 | baseplate spike | tail | 1 | 17892 | 18620 |
| YP_009126627.1 | NC_026611_p24 | hypothetical protein | phrog_1830 | unknown function | unknown function | 1 | 15931 | 16752 |