Genomic map of Edwardsiella phage GF-2 (NC_026611)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_026611
Definition
Edwardsiella phage GF-2 DNA, complete sequence.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Gofduovirus; Edwardsiella virus GF2.
DB of origin
REFSEQ
Length
43129
Host Name
Edwardsiella
Host domain
Bacteria
Is prophage?
undef
Number of proteins
82
%GC
51.26
Number of singletons
18
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009126660.1 NC_026611_p57 hypothetical protein singleton unknown function unknown function 1 32097 32213
YP_009126684.1 NC_026611_p81 hypothetical protein phrog_4772 unknown function unknown function 1 42568 42819
YP_009126663.1 NC_026611_p60 puative prophage anti-repressor phrog_3 transcriptional repressor transcription regulation 1 33505 33708
YP_009126607.1 NC_026611_p4 head protein phrog_324 head morphogenesis head and packaging 1 3361 4125
YP_009126622.1 NC_026611_p19 hypothetical protein phrog_12129 unknown function unknown function 1 13563 13805
YP_009126626.1 NC_026611_p23 antirepressor protein Ant phrog_245 anti-repressor Ant transcription regulation 1 15003 15878
YP_009126664.1 NC_026611_p61 regulatory protein CII phrog_191 CII-like transcriptional activator transcription regulation 1 33819 34109
YP_009126681.1 NC_026611_p78 lysozyme phrog_7 endolysin lysis 1 40746 41186
YP_009126673.1 NC_026611_p70 DNA-binding protein Roi phrog_63 anti-repressor Ant transcription regulation 1 37323 38033
YP_009126672.1 NC_026611_p69 hypothetical protein phrog_25166 unknown function unknown function 1 37109 37330
YP_009126608.1 NC_026611_p5 hypothetical protein phrog_38256 unknown function unknown function 1 4217 4387
YP_009126658.1 NC_026611_p55 collagen-like protein singleton unknown function unknown function -1 30525 31571
YP_009126619.1 NC_026611_p16 hypothetical protein phrog_1932 tail assembly chaperone tail 1 11231 11644
YP_009126654.1 NC_026611_p51 hypothetical protein singleton unknown function unknown function -1 28827 28943
YP_009126624.1 NC_026611_p21 regulator protein Arc-like DNA binding domain phrog_7906 Arc-like transcriptional regulator transcription regulation -1 14482 14751
YP_009126670.1 NC_026611_p67 hypothetical protein phrog_16975 unknown function unknown function 1 36503 36883
YP_009126620.1 NC_026611_p17 hypothetical protein singleton unknown function unknown function 1 11713 11859
YP_009126659.1 NC_026611_p56 anti-termination protein N phrog_271 anti-termination protein N-like transcription regulation -1 31573 31812
YP_009126604.1 NC_026611_p1 terminase small subunit phrog_1206 terminase small subunit head and packaging 1 1 600
YP_009126667.1 NC_026611_p64 hypothetical protein singleton unknown function unknown function 1 35778 35900
YP_009126631.1 NC_026611_p28 hypothetical protein phrog_120 baseplate wedge subunit tail 1 18632 18976
YP_009126635.1 NC_026611_p32 tail assembly chaperone phrog_188 tail fiber assembly protein tail 1 21601 21951
YP_009126629.1 NC_026611_p26 hypothetical protein phrog_196 baseplate hub tail 1 17044 17895
YP_009126616.1 NC_026611_p13 hypothetical protein phrog_1876 unknown function unknown function 1 8786 9295
YP_009126678.1 NC_026611_p75 hypothetical protein singleton unknown function unknown function 1 39093 39239
YP_009126679.1 NC_026611_p76 antitermination protein Q phrog_943 anti-termination protein Q-like transcription regulation 1 39226 39750
YP_009126653.1 NC_026611_p50 hypothetical protein phrog_11519 unknown function unknown function -1 28591 28830
YP_009126615.1 NC_026611_p12 hypothetical protein phrog_1912 head protein head and packaging 1 8418 8789
YP_009126665.1 NC_026611_p62 DNA replication protein O phrog_391 replication initiation O-like DNA, RNA and nucleotide metabolism 1 34168 35010
YP_009126655.1 NC_026611_p52 CIII protein phrog_550 CIII anti-termination transcription regulation -1 28940 29077
YP_009126638.1 NC_026611_p35 hypothetical protein singleton unknown function unknown function -1 23670 23789
YP_009126639.1 NC_026611_p36 hypothetical protein phrog_303 unknown function unknown function -1 23779 23976
YP_009126661.1 NC_026611_p58 hypothetical protein singleton unknown function unknown function -1 32264 32668
YP_009126634.1 NC_026611_p31 tail fiber protein phrog_12796 tail fiber protein tail 1 20840 21604
YP_009126637.1 NC_026611_p34 integrase phrog_1 integrase integration and excision -1 22316 23479
YP_009126676.1 NC_026611_p73 recombination endonuclease phrog_171 NinG/ Rap DNA junction specific endonuclease DNA, RNA and nucleotide metabolism 1 38384 38989
YP_009126683.1 NC_026611_p80 hypothetical protein phrog_1030 tail needle knob tail 1 42162 42560
YP_009126609.1 NC_026611_p6 hypothetical protein phrog_2229 head maturation protease head and packaging 1 4442 5701
YP_009126614.1 NC_026611_p11 hypothetical protein phrog_222 tail completion or Neck1 protein connector 1 7970 8443
YP_009126618.1 NC_026611_p15 hypothetical protein phrog_1964 virion structural protein head and packaging 1 10797 11231
YP_009126682.1 NC_026611_p79 hypothetical protein phrog_312 Rz-like spanin lysis 1 41168 41695
YP_009126650.1 NC_026611_p47 hypothetical protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 27519 27917
YP_009126613.1 NC_026611_p10 hypothetical protein phrog_302 virion structural protein head and packaging 1 7572 7973
YP_009126649.1 NC_026611_p46 hypothetical protein singleton unknown function unknown function -1 27251 27511
YP_009126656.1 NC_026611_p53 hypothetical protein phrog_1376 unknown function unknown function -1 29108 30034
YP_009126625.1 NC_026611_p22 regulator protein Arc-like DNA binding domain phrog_582 Arc-like repressor transcription regulation 1 14852 15013
YP_009126651.1 NC_026611_p48 recombination protein phrog_2324 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 27914 28507
YP_009126657.1 NC_026611_p54 hypothetical protein singleton unknown function unknown function -1 30039 30431
YP_009126646.1 NC_026611_p43 hypothetical protein phrog_874 unknown function unknown function -1 25663 26436
YP_009126685.1 NC_026611_p82 hypothetical protein singleton unknown function unknown function 1 42828 43037
YP_009126632.1 NC_026611_p29 hypothetical protein phrog_6 baseplate wedge subunit tail 1 18973 20199
YP_009126640.1 NC_026611_p37 hypothetical protein phrog_33085 unknown function unknown function -1 23960 24184
YP_009126668.1 NC_026611_p65 hypothetical protein singleton unknown function unknown function 1 35897 36217
YP_009126610.1 NC_026611_p7 hypothetical protein phrog_2122 minor head protein head and packaging 1 5711 6199
YP_009126623.1 NC_026611_p20 hypothetical protein phrog_3983 unknown function unknown function -1 13970 14485
YP_009126648.1 NC_026611_p45 hypothetical protein phrog_25300 unknown function unknown function -1 26912 27247
YP_009126644.1 NC_026611_p41 EaI protein phrog_8222 unknown function unknown function -1 25163 25351
YP_009126612.1 NC_026611_p9 hypothetical protein phrog_2085 unknown function unknown function 1 7245 7571
YP_009126647.1 NC_026611_p44 hypothetical protein phrog_492 unknown function unknown function -1 26433 26915
YP_009126617.1 NC_026611_p14 hypothetical protein phrog_205 tail sheath tail 1 9299 10786
YP_009126633.1 NC_026611_p30 hypothetical protein phrog_587 structural protein head and packaging 1 20196 20837
YP_009126677.1 NC_026611_p74 hypothetical protein singleton unknown function unknown function 1 38977 39093
YP_009126642.1 NC_026611_p39 hypothetical protein phrog_1852 unknown function unknown function -1 24531 24755
YP_009126611.1 NC_026611_p8 capsid protein phrog_264 major head protein head and packaging 1 6199 7233
YP_009126605.1 NC_026611_p2 terminase large subunit phrog_2 terminase large subunit head and packaging 1 575 1948
YP_009126606.1 NC_026611_p3 portal protein phrog_146 portal protein head and packaging 1 1950 3395
YP_009126680.1 NC_026611_p77 hypothetical protein phrog_31287 unknown function unknown function 1 40126 40749
YP_009126666.1 NC_026611_p63 DNA replication protein P phrog_109 P-like helicase loader DNA, RNA and nucleotide metabolism 1 35007 35693
YP_009126645.1 NC_026611_p42 hypothetical protein singleton unknown function unknown function -1 25353 25661
YP_009126641.1 NC_026611_p38 hypothetical protein phrog_444 unknown function unknown function -1 24181 24531
YP_009126652.1 NC_026611_p49 hypothetical protein singleton unknown function unknown function -1 28482 28637
YP_009126621.1 NC_026611_p18 transglycosylase phrog_2013 lytic tail protein tail 1 11856 13562
YP_009126636.1 NC_026611_p33 hypothetical protein singleton unknown function unknown function 1 21961 22131
YP_009126674.1 NC_026611_p71 hypothetical protein phrog_676 unknown function unknown function 1 38030 38185
YP_009126675.1 NC_026611_p72 hypothetical protein phrog_1212 unknown function unknown function 1 38185 38382
YP_009126669.1 NC_026611_p66 hypothetical protein singleton unknown function unknown function 1 36220 36429
YP_009126643.1 NC_026611_p40 hypothetical protein phrog_660 unknown function unknown function -1 24752 25159
YP_009126671.1 NC_026611_p68 hypothetical protein singleton unknown function unknown function 1 36876 37049
YP_009126628.1 NC_026611_p25 structural protein phrog_349 virion structural protein head and packaging 1 16749 17051
YP_009126662.1 NC_026611_p59 prophage repressor CI phrog_4 transcriptional repressor transcription regulation -1 32746 33399
YP_009126630.1 NC_026611_p27 baseplate protein phrog_11 baseplate spike tail 1 17892 18620
YP_009126627.1 NC_026611_p24 hypothetical protein phrog_1830 unknown function unknown function 1 15931 16752