Genomic map of Vibrio phage phiVC8 (NC_027118)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_027118
Definition
Vibrio phage phiVC8, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Enhodamvirus.
DB of origin
REFSEQ
Length
39422
Host Name
Vibrio cholerae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
48
%GC
50.8
Number of singletons
2
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009140165.1 NC_027118_p36 hypothetical protein phrog_8941 unknown function unknown function -1 32538 33230
YP_009140159.1 NC_027118_p30 hypothetical protein phrog_2340 endonuclease DNA, RNA and nucleotide metabolism -1 28330 28680
YP_009140157.1 NC_027118_p28 Integrase phrog_1156 DNA primase DNA, RNA and nucleotide metabolism -1 24154 26442
YP_009140172.1 NC_027118_p43 hypothetical protein phrog_9197 unknown function unknown function -1 36543 36836
YP_009140176.1 NC_027118_p47 hypothetical protein singleton unknown function unknown function 1 38093 38788
YP_009140158.1 NC_027118_p29 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 26432 28333
YP_009140153.1 NC_027118_p24 hypothetical protein phrog_10658 unknown function unknown function -1 22150 22308
YP_009140135.1 NC_027118_p6 hypothetical protein phrog_5977 unknown function unknown function 1 4326 4583
YP_009140139.1 NC_027118_p10 hypothetical protein phrog_8869 unknown function unknown function 1 6926 7774
YP_009140133.1 NC_027118_p4 head to tail connecting protein phrog_332 head-tail adaptor connector 1 2443 4086
YP_009140145.1 NC_027118_p16 hypothetical protein phrog_9290 unknown function unknown function 1 12951 13349
YP_009140164.1 NC_027118_p35 hypothetical protein phrog_9940 unknown function unknown function -1 32188 32538
YP_009140162.1 NC_027118_p33 hypothetical protein phrog_2378 unknown function unknown function -1 30119 30586
YP_009140175.1 NC_027118_p46 hypothetical protein phrog_8878 unknown function unknown function -1 37495 38094
YP_009140151.1 NC_027118_p22 hypothetical protein phrog_474 phosphofructokinase other -1 21350 21646
YP_009140155.1 NC_027118_p26 hypothetical protein phrog_9860 unknown function unknown function -1 22819 23079
YP_009140131.1 NC_027118_p2 terminase small subunit phrog_8823 terminase small subunit head and packaging 1 128 739
YP_009140152.1 NC_027118_p23 hypothetical protein phrog_2165 DNA helicase DNA, RNA and nucleotide metabolism -1 21723 22160
YP_009140171.1 NC_027118_p42 hypothetical protein phrog_3600 antimicrobial peptide resistance and lipid A acylation protein PagP moron, auxiliary metabolic gene and host takeover -1 35985 36437
YP_009140148.1 NC_027118_p19 structural protein phrog_684 virion structural protein head and packaging 1 16604 18952
YP_009140174.1 NC_027118_p45 hypothetical protein phrog_9346 unknown function unknown function -1 37245 37490
YP_009140147.1 NC_027118_p18 hypothetical protein phrog_8824 unknown function unknown function 1 15430 16602
YP_009140134.1 NC_027118_p5 hypothetical protein phrog_9429 unknown function unknown function 1 4086 4313
YP_009140149.1 NC_027118_p20 tail fiber phrog_4440 tail fiber protein tail 1 18956 19984
YP_009140132.1 NC_027118_p3 terminase large subunit phrog_2 terminase large subunit head and packaging 1 726 2432
YP_009140169.1 NC_027118_p40 hypothetical protein phrog_9688 unknown function unknown function -1 34621 35421
YP_009140166.1 NC_027118_p37 hypothetical protein phrog_4049 unknown function unknown function -1 33381 33845
YP_009140170.1 NC_027118_p41 hypothetical protein phrog_9060 unknown function unknown function -1 35490 35975
YP_009140173.1 NC_027118_p44 hypothetical protein phrog_9131 unknown function unknown function -1 36848 37138
YP_009140146.1 NC_027118_p17 structural protein phrog_9153 unknown function unknown function 1 13346 15430
YP_009140167.1 NC_027118_p38 hypothetical protein phrog_3392 unknown function unknown function -1 33842 34252
YP_009140160.1 NC_027118_p31 ssDNA binding protein phrog_7364 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 28677 29192
YP_009140163.1 NC_027118_p34 superfamily II DNA/RNA helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 30649 32118
YP_009140136.1 NC_027118_p7 hypothetical protein phrog_3742 unknown function unknown function 1 4552 5439
YP_009140154.1 NC_027118_p25 metal dependent phosphohydrolase phrog_7076 dATP triphosphohydrolase DNA, RNA and nucleotide metabolism -1 22305 22817
YP_009140130.1 NC_027118_p1 hypothetical protein phrog_9836 unknown function unknown function 1 1 222
YP_009140168.1 NC_027118_p39 hypothetical protein phrog_9382 unknown function unknown function -1 34254 34613
YP_009140142.1 NC_027118_p13 hypothetical protein phrog_8910 unknown function unknown function 1 8604 8906
YP_009140161.1 NC_027118_p32 hypothetical protein phrog_2402 unknown function unknown function -1 29253 30068
YP_009140140.1 NC_027118_p11 hypothetical protein phrog_8135 unknown function unknown function 1 7771 8136
YP_009140141.1 NC_027118_p12 hypothetical protein phrog_894 endolysin lysis 1 8138 8611
YP_009140156.1 NC_027118_p27 adenylosuccinate synthetase phrog_1211 2-aminooxy adenylosuccinate synthetase DNA, RNA and nucleotide metabolism -1 23081 24112
YP_009140143.1 NC_027118_p14 tail protein phrog_9239 tail tubular protein tail 1 8930 11155
YP_009140137.1 NC_027118_p8 structural protein phrog_3437 major head protein head and packaging 1 5607 6575
YP_009140144.1 NC_027118_p15 structural protein phrog_376 tail protein tail 1 11164 12948
YP_009140150.1 NC_027118_p21 outer capsid protein phrog_8700 unknown function unknown function 1 20009 21322
YP_009140138.1 NC_027118_p9 hypothetical protein phrog_8977 unknown function unknown function 1 6642 6911
YP_009140177.1 NC_027118_p48 hypothetical protein singleton unknown function unknown function -1 38663 39028