Genomic map of Lactococcus phage 1358 (NC_027120)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_027120
Definition
Lactococcus phage 1358, complete sequence.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
36892
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
43
%GC
51.03
Number of singletons
19
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009140419.1 NC_027120_p32 hypothetical protein singleton unknown function unknown function 1 31664 32071
YP_009140426.1 NC_027120_p39 hypothetical protein singleton unknown function unknown function 1 33345 33569
YP_009140429.1 NC_027120_p42 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 34667 35008
YP_009140415.1 NC_027120_p28 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 25011 26972
YP_009140413.1 NC_027120_p26 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism 1 22903 24123
YP_009140404.1 NC_027120_p17 phage structural protein phrog_13564 minor tail protein tail 1 13987 15045
YP_009140390.1 NC_027120_p3 portal protein phrog_64 portal protein head and packaging 1 1944 3587
YP_009140417.1 NC_027120_p30 hypothetical protein singleton unknown function unknown function 1 29756 31153
YP_009140398.1 NC_027120_p11 phage structural protein phrog_5 tail completion or Neck1 protein connector 1 8535 8987
YP_009140393.1 NC_027120_p6 major head protein phrog_422 major head protein head and packaging 1 5635 6528
YP_009140406.1 NC_027120_p19 phage structural protein singleton unknown function unknown function 1 16694 18484
YP_009140407.1 NC_027120_p20 phage structural protein singleton unknown function unknown function 1 18503 19684
YP_009140397.1 NC_027120_p10 head-tail adaptator phrog_1059 head-tail adaptor connector 1 8185 8535
YP_009140430.1 NC_027120_p43 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 35005 36738
YP_009140416.1 NC_027120_p29 helicase phrog_256 DNA helicase DNA, RNA and nucleotide metabolism 1 27051 29600
YP_009140396.1 NC_027120_p9 phage structural protein phrog_1236 head protein head and packaging 1 7586 8176
YP_009140420.1 NC_027120_p33 hypothetical protein singleton unknown function unknown function 1 32056 32319
YP_009140394.1 NC_027120_p7 hypothetical protein singleton unknown function unknown function 1 6588 7157
YP_009140414.1 NC_027120_p27 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 24136 25008
YP_009140428.1 NC_027120_p41 hypothetical protein singleton unknown function unknown function 1 33865 34677
YP_009140412.1 NC_027120_p25 hypothetical protein singleton unknown function unknown function 1 22127 22903
YP_009140399.1 NC_027120_p12 phage structural protein phrog_957 head protein head and packaging 1 8984 9424
YP_009140389.1 NC_027120_p2 terminase large subunit phrog_2 terminase large subunit head and packaging 1 565 1929
YP_009140422.1 NC_027120_p35 hypothetical protein singleton unknown function unknown function 1 32492 32686
YP_009140409.1 NC_027120_p22 endolysin phrog_1309 endolysin lysis 1 20162 20863
YP_009140425.1 NC_027120_p38 hypothetical protein singleton unknown function unknown function 1 33152 33343
YP_009140418.1 NC_027120_p31 hypothetical protein singleton unknown function unknown function 1 31426 31554
YP_009140400.1 NC_027120_p13 phage structural protein phrog_885 major tail protein tail 1 9421 10902
YP_009140423.1 NC_027120_p36 hypothetical protein singleton unknown function unknown function 1 32683 32925
YP_009140421.1 NC_027120_p34 hypothetical protein singleton unknown function unknown function 1 32316 32492
YP_009140411.1 NC_027120_p24 hypothetical protein singleton unknown function unknown function 1 21759 22034
YP_009140391.1 NC_027120_p4 minor head protein phrog_115 minor head protein head and packaging 1 3927 4865
YP_009140388.1 NC_027120_p1 terminase small subunit singleton unknown function unknown function 1 18 623
YP_009140392.1 NC_027120_p5 phage structural protein phrog_194 head scaffolding protein head and packaging 1 4970 5602
YP_009140402.1 NC_027120_p15 hypothetical protein phrog_1294 peptide methionine sulfoxide reductase other 1 11658 11918
YP_009140401.1 NC_027120_p14 hypothetical protein phrog_1021 unknown function unknown function 1 10987 11598
YP_009140410.1 NC_027120_p23 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 21538 21762
YP_009140424.1 NC_027120_p37 hypothetical protein singleton unknown function unknown function 1 32925 33152
YP_009140408.1 NC_027120_p21 holin phrog_199 holin lysis 1 19750 20196
YP_009140405.1 NC_027120_p18 phage structural protein phrog_7064 tail protein tail 1 15061 16683
YP_009140403.1 NC_027120_p16 tail tape measure protein phrog_58 tail length tape measure protein tail 1 11915 13987
YP_009140395.1 NC_027120_p8 hypothetical protein singleton unknown function unknown function 1 7175 7495
YP_009140427.1 NC_027120_p40 hypothetical protein singleton unknown function unknown function 1 33566 33868