| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_027125 |
Definition |
Flavobacterium phage FCL-2, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ficleduovirus; Flavobacterium virus FCL2. |
DB of origin |
REFSEQ |
Length |
47142 |
Host Name |
Flavobacterium columnare |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
74 |
%GC |
30.19 |
Number of singletons |
8 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009140548.1 | NC_027125_p47 | protein of an unannotated phage | phrog_561 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 32318 | 33073 |
| YP_009140530.1 | NC_027125_p29 | protein of an unannotated phage | phrog_28 | tail length tape measure protein | tail | 1 | 18719 | 20548 |
| YP_009140491.1 | NC_027125_p62 | protein of an unannotated phage | phrog_11164 | unknown function | unknown function | 1 | 41884 | 42027 |
| YP_009140554.1 | NC_027125_p54 | protein of an unannotated phage | phrog_428 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 37596 | 38312 |
| YP_009140529.1 | NC_027125_p28 | protein of an unannotated phage | phrog_4648 | unknown function | unknown function | 1 | 18055 | 18471 |
| YP_009140504.1 | NC_027125_p2 | protein of an unannotated phage | phrog_6702 | unknown function | unknown function | 1 | 805 | 1008 |
| YP_009142773.1 | NC_027125_p60 | protein of an unannotated phage | phrog_717 | unknown function | unknown function | 1 | 41210 | 41437 |
| YP_009140528.1 | NC_027125_p27 | protein of an unannotated phage | phrog_4699 | tail tube protein | tail | 1 | 17589 | 17999 |
| YP_009140500.1 | NC_027125_p72 | protein of an unannotated phage | phrog_98 | unknown function | unknown function | 1 | 45809 | 46195 |
| YP_009140547.1 | NC_027125_p46 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 31936 | 32304 |
| YP_009140550.1 | NC_027125_p50 | protein of an unannotated phage | phrog_4763 | unknown function | unknown function | 1 | 33615 | 34358 |
| YP_009140527.1 | NC_027125_p26 | protein of an unannotated phage | phrog_165 | tail sheath | tail | 1 | 16048 | 17568 |
| YP_009140534.1 | NC_027125_p33 | protein of an unannotated phage | phrog_5194 | unknown function | unknown function | 1 | 23031 | 24077 |
| YP_009142772.1 | NC_027125_p49 | protein of an unannotated phage | phrog_6729 | unknown function | unknown function | 1 | 33478 | 33615 |
| YP_009140531.1 | NC_027125_p30 | protein of an unannotated phage | phrog_180 | baseplate wedge subunit | tail | 1 | 20564 | 21043 |
| YP_009140506.1 | NC_027125_p4 | protein of an unannotated phage | phrog_15 | terminase large subunit | head and packaging | 1 | 1288 | 3327 |
| YP_009140494.1 | NC_027125_p65 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 43049 | 43348 |
| YP_009140541.1 | NC_027125_p40 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 29203 | 29499 |
| YP_009140497.1 | NC_027125_p69 | protein of an unannotated phage | phrog_6498 | unknown function | unknown function | 1 | 44277 | 44546 |
| YP_009140517.1 | NC_027125_p16 | protein of an unannotated phage | phrog_6584 | unknown function | unknown function | 1 | 10195 | 10659 |
| YP_009140502.1 | NC_027125_p74 | protein of an unannotated phage | phrog_22562 | unknown function | unknown function | 1 | 46674 | 46985 |
| YP_009140507.1 | NC_027125_p5 | protein of an unannotated phage | phrog_6720 | unknown function | unknown function | 1 | 3424 | 3828 |
| YP_009140553.1 | NC_027125_p53 | protein of an unannotated phage | phrog_6348 | unknown function | unknown function | 1 | 37218 | 37469 |
| YP_009140492.1 | NC_027125_p63 | protein of an unannotated phage | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 42032 | 42478 |
| YP_009140509.1 | NC_027125_p7 | protein of an unannotated phage | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 4145 | 5356 |
| YP_009140521.1 | NC_027125_p20 | protein of an unannotated phage | phrog_53 | head maturation protease | head and packaging | 1 | 12063 | 13325 |
| YP_009140512.1 | NC_027125_p10 | protein of an unannotated phage | phrog_5196 | unknown function | unknown function | 1 | 7161 | 7454 |
| YP_009140559.1 | NC_027125_p59 | protein of an unannotated phage | phrog_6141 | unknown function | unknown function | 1 | 40629 | 41153 |
| YP_009140526.1 | NC_027125_p25 | protein of an unannotated phage | phrog_4671 | unknown function | unknown function | 1 | 15437 | 16042 |
| YP_009140545.1 | NC_027125_p44 | protein of an unannotated phage | phrog_6667 | unknown function | unknown function | 1 | 30568 | 30753 |
| YP_009140546.1 | NC_027125_p45 | protein of an unannotated phage | phrog_6347 | unknown function | unknown function | 1 | 30773 | 31933 |
| YP_009140524.1 | NC_027125_p23 | protein of an unannotated phage | phrog_6286 | unknown function | unknown function | 1 | 14878 | 15042 |
| YP_009140510.1 | NC_027125_p8 | protein of an unannotated phage | phrog_2159 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 5340 | 5894 |
| YP_009140538.1 | NC_027125_p37 | protein of an unannotated phage | phrog_177 | baseplate hub | tail | 1 | 27120 | 28166 |
| YP_009140498.1 | NC_027125_p70 | protein of an unannotated phage | phrog_6590 | unknown function | unknown function | 1 | 44709 | 45056 |
| YP_009140515.1 | NC_027125_p14 | protein of an unannotated phage | phrog_6635 | unknown function | unknown function | 1 | 9566 | 9865 |
| YP_009140523.1 | NC_027125_p22 | protein of an unannotated phage | phrog_29 | major head protein | head and packaging | 1 | 13796 | 14878 |
| YP_009140514.1 | NC_027125_p12 | protein of an unannotated phage | phrog_6592 | unknown function | unknown function | 1 | 9099 | 9332 |
| YP_009140501.1 | NC_027125_p73 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 46330 | 46671 |
| YP_009140505.1 | NC_027125_p3 | protein of an unannotated phage | phrog_6696 | unknown function | unknown function | 1 | 1015 | 1275 |
| YP_009140549.1 | NC_027125_p48 | protein of an unannotated phage | phrog_715 | MazG-like pyrophosphatase | other | 1 | 33060 | 33413 |
| YP_009140551.1 | NC_027125_p51 | protein of an unannotated phage | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 34351 | 36876 |
| YP_009140552.1 | NC_027125_p52 | protein of an unannotated phage | phrog_6579 | unknown function | unknown function | 1 | 36857 | 37225 |
| YP_009140520.1 | NC_027125_p19 | protein of an unannotated phage | phrog_5885 | unknown function | unknown function | 1 | 11415 | 11798 |
| YP_009140533.1 | NC_027125_p32 | protein of an unannotated phage | phrog_4920 | unknown function | unknown function | 1 | 22229 | 23008 |
| YP_009140557.1 | NC_027125_p57 | protein of an unannotated phage | phrog_5945 | unknown function | unknown function | 1 | 39824 | 40009 |
| YP_009140503.1 | NC_027125_p1 | protein of an unannotated phage | phrog_5193 | unknown function | unknown function | 1 | 18 | 725 |
| YP_009140543.1 | NC_027125_p42 | protein of an unannotated phage | phrog_6759 | unknown function | unknown function | 1 | 30066 | 30302 |
| YP_009142776.1 | NC_027125_p68 | protein of an unannotated phage | phrog_6539 | unknown function | unknown function | 1 | 44050 | 44262 |
| YP_009140556.1 | NC_027125_p56 | protein of an unannotated phage | phrog_6235 | unknown function | unknown function | 1 | 39376 | 39819 |
| YP_009140537.1 | NC_027125_p36 | protein of an unannotated phage | phrog_184 | baseplate hub | tail | 1 | 25903 | 27117 |
| YP_009140519.1 | NC_027125_p18 | protein of an unannotated phage | phrog_6545 | unknown function | unknown function | 1 | 11171 | 11413 |
| YP_009140516.1 | NC_027125_p15 | protein of an unannotated phage | phrog_5883 | unknown function | unknown function | 1 | 9849 | 10190 |
| YP_009140536.1 | NC_027125_p35 | protein of an unannotated phage | phrog_4688 | minor tail protein | tail | 1 | 25247 | 25906 |
| YP_009140544.1 | NC_027125_p43 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 30305 | 30565 |
| YP_009140493.1 | NC_027125_p64 | protein of an unannotated phage | phrog_6629 | unknown function | unknown function | 1 | 42600 | 42998 |
| YP_009140518.1 | NC_027125_p17 | protein of an unannotated phage | phrog_1084 | unknown function | unknown function | 1 | 10662 | 11006 |
| YP_009142771.1 | NC_027125_p13 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 9439 | 9564 |
| YP_009142775.1 | NC_027125_p67 | protein of an unannotated phage | phrog_8877 | unknown function | unknown function | 1 | 43767 | 44015 |
| YP_009140540.1 | NC_027125_p39 | protein of an unannotated phage | phrog_6526 | unknown function | unknown function | 1 | 28817 | 29059 |
| YP_009140499.1 | NC_027125_p71 | protein of an unannotated phage | phrog_13535 | unknown function | unknown function | 1 | 45363 | 45806 |
| YP_009140542.1 | NC_027125_p41 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 29663 | 29959 |
| YP_009140558.1 | NC_027125_p58 | protein of an unannotated phage | phrog_4632 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 40013 | 40534 |
| YP_009140513.1 | NC_027125_p11 | protein of an unannotated phage | phrog_21 | portal protein | head and packaging | 1 | 7472 | 9085 |
| YP_009140525.1 | NC_027125_p24 | protein of an unannotated phage | phrog_4598 | head closure Hc1 | connector | 1 | 15057 | 15440 |
| YP_009140555.1 | NC_027125_p55 | protein of an unannotated phage | phrog_5482 | unknown function | unknown function | 1 | 38411 | 39364 |
| YP_009140511.1 | NC_027125_p9 | protein of an unannotated phage | phrog_2302 | phosphoadenosine phosphosulfate reductase | moron, auxiliary metabolic gene and host takeover | 1 | 5876 | 7009 |
| YP_009140508.1 | NC_027125_p6 | protein of an unannotated phage | phrog_5809 | unknown function | unknown function | 1 | 3825 | 4148 |
| YP_009142774.1 | NC_027125_p66 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 43599 | 43736 |
| YP_009140535.1 | NC_027125_p34 | protein of an unannotated phage | phrog_5221 | unknown function | unknown function | 1 | 24081 | 25250 |
| YP_009140539.1 | NC_027125_p38 | protein of an unannotated phage | phrog_5226 | unknown function | unknown function | 1 | 28169 | 28657 |
| YP_009140490.1 | NC_027125_p61 | protein of an unannotated phage | phrog_7108 | unknown function | unknown function | 1 | 41453 | 41887 |
| YP_009140522.1 | NC_027125_p21 | protein of an unannotated phage | phrog_5204 | head decoration | head and packaging | 1 | 13338 | 13793 |
| YP_009140532.1 | NC_027125_p31 | protein of an unannotated phage | phrog_6 | baseplate wedge subunit | tail | 1 | 21049 | 22224 |