| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_027295 |
Definition |
Propionibacterium phage PHL199M00, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus. |
DB of origin |
REFSEQ |
Length |
29806 |
Host Name |
Propionibacterium acnes |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
45 |
%GC |
54.04 |
Number of singletons |
1 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009145824.1 | NC_027295_p10 | hypothetical protein | phrog_1892 | minor tail protein | tail | 1 | 6731 | 7102 |
| YP_009145820.1 | NC_027295_p6 | major head protein | phrog_10 | major head protein | head and packaging | 1 | 4636 | 5583 |
| YP_009145847.1 | NC_027295_p33 | DNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 21882 | 22745 |
| YP_009145829.1 | NC_027295_p15 | minor tail subunit | phrog_106 | minor tail protein | tail | 1 | 11284 | 12231 |
| YP_009145830.1 | NC_027295_p16 | protease | phrog_110 | minor tail protein | tail | 1 | 12290 | 13396 |
| YP_009145833.1 | NC_027295_p19 | collagen-like protein | phrog_1806 | collagen like minor tail | tail | 1 | 14536 | 15342 |
| YP_009145822.1 | NC_027295_p8 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 6123 | 6437 |
| YP_009145840.1 | NC_027295_p26 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18263 | 19312 |
| YP_009145815.1 | NC_027295_p1 | excinuclease | phrog_1897 | terminase small subunit | head and packaging | 1 | 34 | 372 |
| YP_009145823.1 | NC_027295_p9 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 6444 | 6734 |
| YP_009145841.1 | NC_027295_p27 | hypothetical protein | phrog_1923 | unknown function | unknown function | -1 | 19309 | 19506 |
| YP_009145855.1 | NC_027295_p41 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26536 | 26895 |
| YP_009145832.1 | NC_027295_p18 | hypothetical protein | phrog_1958 | minor tail protein | tail | 1 | 14276 | 14536 |
| YP_009145853.1 | NC_027295_p39 | hypothetical protein | phrog_1884 | unknown function | unknown function | -1 | 25294 | 25521 |
| YP_009145839.1 | NC_027295_p25 | hypothetical protein | phrog_1340 | unknown function | unknown function | -1 | 17933 | 18253 |
| YP_009145825.1 | NC_027295_p11 | major tail protein | phrog_117 | major tail protein | tail | 1 | 7162 | 7785 |
| YP_009145838.1 | NC_027295_p24 | hypothetical protein | phrog_1947 | unknown function | unknown function | -1 | 17643 | 17918 |
| YP_009145856.1 | NC_027295_p42 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26929 | 27237 |
| YP_009145857.1 | NC_027295_p43 | hypothetical protein | phrog_8276 | unknown function | unknown function | 1 | 28934 | 29089 |
| YP_009145859.1 | NC_027295_p45 | endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 29452 | 29754 |
| YP_009145835.1 | NC_027295_p21 | holin | phrog_443 | holin | lysis | 1 | 16275 | 16673 |
| YP_009145854.1 | NC_027295_p40 | hypothetical protein | phrog_1908 | unknown function | unknown function | -1 | 25538 | 26071 |
| YP_009145858.1 | NC_027295_p44 | hypothetical protein | singleton | unknown function | unknown function | 1 | 29255 | 29452 |
| YP_009145817.1 | NC_027295_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 1885 | 3210 |
| YP_009145852.1 | NC_027295_p38 | hypothetical protein | phrog_1937 | unknown function | unknown function | -1 | 25097 | 25297 |
| YP_009145843.1 | NC_027295_p29 | hypothetical protein | phrog_1881 | unknown function | unknown function | -1 | 20047 | 20613 |
| YP_009145826.1 | NC_027295_p12 | hypothetical protein | phrog_1927 | tail assembly chaperone | tail | 1 | 7812 | 8108 |
| YP_009145844.1 | NC_027295_p30 | DNA primase | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20657 | 21328 |
| YP_009145849.1 | NC_027295_p35 | hypothetical protein | phrog_1890 | unknown function | unknown function | -1 | 23297 | 23710 |
| YP_009145818.1 | NC_027295_p4 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 3214 | 3969 |
| YP_009145851.1 | NC_027295_p37 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 24647 | 24997 |
| YP_009145828.1 | NC_027295_p14 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 8502 | 11267 |
| YP_009145819.1 | NC_027295_p5 | scaffold protein | phrog_1879 | head scaffolding protein | head and packaging | 1 | 4078 | 4629 |
| YP_009145827.1 | NC_027295_p13 | hypothetical protein | phrog_3166 | unknown function | unknown function | 1 | 8207 | 8494 |
| YP_009145834.1 | NC_027295_p20 | endolysin | phrog_670 | endolysin | lysis | 1 | 15396 | 16262 |
| YP_009145821.1 | NC_027295_p7 | hypothetical protein | phrog_1290 | head-tail adaptor | connector | 1 | 5609 | 6088 |
| YP_009145848.1 | NC_027295_p34 | hypothetical protein | phrog_1288 | unknown function | unknown function | -1 | 22784 | 23248 |
| YP_009145850.1 | NC_027295_p36 | exonuclease | phrog_1870 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 23707 | 24645 |
| YP_009145836.1 | NC_027295_p22 | hypothetical protein | phrog_2092 | unknown function | unknown function | -1 | 16765 | 17253 |
| YP_009145845.1 | NC_027295_p31 | DNA primase | phrog_2304 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 21165 | 21566 |
| YP_009145837.1 | NC_027295_p23 | sigma factor | phrog_1729 | unknown function | unknown function | -1 | 17259 | 17639 |
| YP_009145831.1 | NC_027295_p17 | hypothetical protein | phrog_1910 | lectin | other | 1 | 13401 | 14231 |
| YP_009145816.1 | NC_027295_p2 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 416 | 1888 |
| YP_009145842.1 | NC_027295_p28 | hypothetical protein | phrog_2548 | unknown function | unknown function | -1 | 19490 | 20050 |
| YP_009145846.1 | NC_027295_p32 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 21526 | 21885 |