Genomic map of Rhizobium phage RHEph06 (NC_027296)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_027296
Definition
Rhizobium phage RHEph06, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Kleczkowskavirus; unclassified Kleczkowskavirus.
DB of origin
REFSEQ
Length
53721
Host Name
Rhizobium etli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
82
%GC
56.42
Number of singletons
40
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009145894.1 NC_027296_p35 hypothetical protein phrog_587 structural protein head and packaging 1 23822 24622
YP_009145910.1 NC_027296_p51 hypothetical protein phrog_887 queuine tRNA-ribosyltransferase moron, auxiliary metabolic gene and host takeover -1 34832 35734
YP_009145866.1 NC_027296_p7 hypothetical protein singleton unknown function unknown function 1 2780 3088
YP_009145863.1 NC_027296_p4 hypothetical protein singleton unknown function unknown function 1 1736 2011
YP_009145926.1 NC_027296_p67 DNA/RNA helicase protein phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 42426 44108
YP_009145860.1 NC_027296_p1 hypothetical protein singleton unknown function unknown function -1 160 360
YP_009145895.1 NC_027296_p36 hypothetical protein singleton unknown function unknown function 1 24635 25540
YP_009145917.1 NC_027296_p58 hypothetical protein phrog_23810 unknown function unknown function -1 38971 39435
YP_009145891.1 NC_027296_p32 baseplate assembly protein phrog_11 baseplate spike tail 1 21923 22585
YP_009145877.1 NC_027296_p18 hypothetical protein phrog_563 virion structural protein head and packaging 1 12405 12875
YP_009145887.1 NC_027296_p28 tail protein phrog_973 tail length tape measure protein tail 1 18358 20094
YP_009145929.1 NC_027296_p70 hypothetical protein phrog_4899 unknown function unknown function -1 45596 46117
YP_009145874.1 NC_027296_p15 hypothetical protein singleton unknown function unknown function 1 10082 10240
YP_009145906.1 NC_027296_p47 DNA polymerase protein phrog_1252 DNA polymerase DNA, RNA and nucleotide metabolism -1 31414 33465
YP_009145938.1 NC_027296_p79 hypothetical protein singleton unknown function unknown function 1 51832 52065
YP_009145875.1 NC_027296_p16 hypothetical protein phrog_4046 unknown function unknown function 1 10301 11122
YP_009145862.1 NC_027296_p3 hypothetical protein singleton unknown function unknown function 1 1005 1739
YP_009145879.1 NC_027296_p20 hypothetical protein singleton unknown function unknown function 1 13901 14287
YP_009145919.1 NC_027296_p60 hypothetical protein singleton unknown function unknown function -1 39797 40063
YP_009145936.1 NC_027296_p77 hypothetical protein singleton unknown function unknown function 1 51267 51602
YP_009145883.1 NC_027296_p24 hypothetical protein phrog_1973 unknown function unknown function 1 15483 16001
YP_009145941.1 NC_027296_p82 hypothetical protein singleton unknown function unknown function 1 52899 53261
YP_009145903.1 NC_027296_p44 hypothetical protein singleton unknown function unknown function 1 29099 29716
YP_009145861.1 NC_027296_p2 hypothetical protein singleton unknown function unknown function -1 374 865
YP_009145871.1 NC_027296_p12 head morphogenesis protein phrog_324 head morphogenesis head and packaging 1 7291 8115
YP_009145876.1 NC_027296_p17 head protein phrog_530 head maturation protease head and packaging 1 11230 12351
YP_009145907.1 NC_027296_p48 DNA polymerase protein, beta subunit phrog_947 DNA polymerase processivity factor DNA, RNA and nucleotide metabolism -1 33468 34442
YP_009145897.1 NC_027296_p38 hypothetical protein singleton unknown function unknown function 1 26606 26971
YP_009145886.1 NC_027296_p27 hypothetical protein phrog_1613 tail assembly chaperone tail 1 17702 18139
YP_009145884.1 NC_027296_p25 structural protein phrog_205 tail sheath tail 1 16036 17193
YP_009145934.1 NC_027296_p75 hypothetical protein phrog_2480 unknown function unknown function -1 48283 48720
YP_009145935.1 NC_027296_p76 DNA primase protein phrog_3022 DNA primase DNA, RNA and nucleotide metabolism 1 48824 51265
YP_009145900.1 NC_027296_p41 hypothetical protein singleton unknown function unknown function 1 27986 28402
YP_009145888.1 NC_027296_p29 hypothetical protein phrog_817 tail fiber protein tail 1 20094 20717
YP_009145890.1 NC_027296_p31 hypothetical protein phrog_196 baseplate hub tail 1 21054 21926
YP_009145878.1 NC_027296_p19 capsid protein phrog_264 major head protein head and packaging 1 12909 13835
YP_009145914.1 NC_027296_p55 6-pyruvoyl tetrahydropterin synthetase protein phrog_2389 QueD-like 6-pyruvoyl-tetrahydropterin synthase moron, auxiliary metabolic gene and host takeover -1 36793 37290
YP_009145940.1 NC_027296_p81 hypothetical protein singleton unknown function unknown function 1 52681 52899
YP_009145912.1 NC_027296_p53 hypothetical protein singleton unknown function unknown function -1 35952 36185
YP_009145865.1 NC_027296_p6 hypothetical protein singleton unknown function unknown function 1 2463 2744
YP_009145930.1 NC_027296_p71 hypothetical protein phrog_6015 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 46231 46875
YP_009145901.1 NC_027296_p42 hypothetical protein singleton unknown function unknown function 1 28454 28657
YP_009145923.1 NC_027296_p64 hypothetical protein singleton unknown function unknown function -1 41373 41897
YP_009145899.1 NC_027296_p40 hypothetical protein phrog_14936 unknown function unknown function 1 27672 27989
YP_009145928.1 NC_027296_p69 hypothetical protein phrog_1990 Cas4-domain exonuclease DNA, RNA and nucleotide metabolism -1 44487 45530
YP_009145909.1 NC_027296_p50 hypothetical protein singleton unknown function unknown function -1 34527 34820
YP_009145922.1 NC_027296_p63 hypothetical protein singleton unknown function unknown function -1 40658 41260
YP_009145916.1 NC_027296_p57 queuosine biosynthesis protein phrog_2076 QueE-like radical SAM domain moron, auxiliary metabolic gene and host takeover -1 38139 38876
YP_009145869.1 NC_027296_p10 terminase protein large subunit phrog_2 terminase large subunit head and packaging 1 4032 5438
YP_009145898.1 NC_027296_p39 lysozyme protein phrog_181 endolysin lysis 1 26985 27662
YP_009145872.1 NC_027296_p13 hypothetical protein singleton unknown function unknown function 1 8146 8439
YP_009145896.1 NC_027296_p37 hypothetical protein singleton unknown function unknown function 1 25540 26601
YP_009145927.1 NC_027296_p68 hypothetical protein singleton unknown function unknown function -1 44119 44349
YP_009145911.1 NC_027296_p52 hypothetical protein singleton unknown function unknown function -1 35735 35950
YP_009145868.1 NC_027296_p9 ribonuclease H protein phrog_531 Rnase H DNA, RNA and nucleotide metabolism 1 3294 3878
YP_009145924.1 NC_027296_p65 hypothetical protein singleton unknown function unknown function -1 41910 42119
YP_009145864.1 NC_027296_p5 hypothetical protein singleton unknown function unknown function 1 2065 2475
YP_009145880.1 NC_027296_p21 structural protein phrog_302 virion structural protein head and packaging 1 14300 14686
YP_009145885.1 NC_027296_p26 structural protein phrog_280 virion structural protein head and packaging 1 17223 17657
YP_009145921.1 NC_027296_p62 hypothetical protein singleton unknown function unknown function -1 40383 40526
YP_009145881.1 NC_027296_p22 hypothetical protein phrog_222 tail completion or Neck1 protein connector 1 14688 15161
YP_009145904.1 NC_027296_p45 hypothetical protein singleton unknown function unknown function -1 30032 30733
YP_009145873.1 NC_027296_p14 hypothetical protein phrog_8480 lysophospholipase L1-like esterase other 1 8439 10085
YP_009145918.1 NC_027296_p59 hypothetical protein singleton unknown function unknown function -1 39497 39793
YP_009145905.1 NC_027296_p46 hypothetical protein singleton unknown function unknown function -1 30925 31386
YP_009145882.1 NC_027296_p23 hypothetical protein phrog_939 head protein head and packaging 1 15154 15486
YP_009145867.1 NC_027296_p8 hypothetical protein singleton unknown function unknown function 1 3085 3297
YP_009145908.1 NC_027296_p49 hypothetical protein singleton unknown function unknown function -1 34435 34551
YP_009145920.1 NC_027296_p61 hypothetical protein singleton unknown function unknown function -1 40149 40364
YP_009145892.1 NC_027296_p33 structural protein phrog_120 baseplate wedge subunit tail 1 22582 22944
YP_009145889.1 NC_027296_p30 hypothetical protein phrog_349 virion structural protein head and packaging 1 20714 21043
YP_009145937.1 NC_027296_p78 hypothetical protein singleton unknown function unknown function 1 51599 51832
YP_009145893.1 NC_027296_p34 baseplate assembly protein phrog_6 baseplate wedge subunit tail 1 22941 23825
YP_009145931.1 NC_027296_p72 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 46987 47688
YP_009145902.1 NC_027296_p43 hypothetical protein singleton unknown function unknown function 1 28809 29099
YP_009145932.1 NC_027296_p73 hypothetical protein singleton unknown function unknown function -1 47685 48062
YP_009145915.1 NC_027296_p56 queuosine biosynthesis protein phrog_1550 QueC-like queuosine biosynthesis moron, auxiliary metabolic gene and host takeover -1 37290 38126
YP_009145870.1 NC_027296_p11 head protein phrog_146 portal protein head and packaging 1 5447 7294
YP_009145913.1 NC_027296_p54 GTP cyclohydrolase I protein phrog_2197 GTP cyclohydrolase other -1 36237 36800
YP_009145939.1 NC_027296_p80 hypothetical protein phrog_824 unknown function unknown function 1 52068 52604
YP_009145933.1 NC_027296_p74 hypothetical protein singleton unknown function unknown function -1 48108 48290
YP_009145925.1 NC_027296_p66 hypothetical protein singleton unknown function unknown function -1 42179 42433