Genomic map of Salmonella phage vB_SPuM_SP116 (NC_027329)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_027329
Definition
Salmonella phage vB_SPuM_SP116, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ounavirinae; Felixounavirus; Salmonella virus SP116.
DB of origin
REFSEQ
Length
87510
Host Name
Salmonella enterica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
126
%GC
38.83
Number of singletons
2
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009146299.1 NC_027329_p54 hypothetical protein phrog_3977 unknown function unknown function 1 35299 35799
YP_009146333.1 NC_027329_p88 ATP-dependent DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 59664 60764
YP_009146252.1 NC_027329_p7 hypothetical protein phrog_2615 unknown function unknown function 1 6226 7038
YP_009146322.1 NC_027329_p77 tail fiber protein phrog_4277 tail fiber protein tail 1 52722 55064
YP_009146336.1 NC_027329_p91 hypothetical protein phrog_9065 unknown function unknown function -1 61171 61425
YP_009146353.1 NC_027329_p108 ribonucleoside triphosphate reductase alpha chain phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 74153 76387
YP_009146330.1 NC_027329_p85 transcriptional regulator phrog_1373 transcriptional regulator transcription regulation -1 58344 58643
YP_009146360.1 NC_027329_p115 oxygen sensitive ribonucleoside-triphosphate reductase phrog_4218 anaerobic ribonucleoside reductase large subunit DNA, RNA and nucleotide metabolism 1 80280 81146
YP_009146259.1 NC_027329_p14 hypothetical protein phrog_335 phosphatase other 1 8586 9371
YP_009146282.1 NC_027329_p37 hypothetical protein phrog_4459 unknown function unknown function -1 19981 20214
YP_009146289.1 NC_027329_p44 tail protein phrog_3995 tail protein tail -1 22811 23443
YP_009146284.1 NC_027329_p39 hypothetical protein phrog_4040 unknown function unknown function -1 20864 21208
YP_009146276.1 NC_027329_p31 hypothetical protein phrog_4330 unknown function unknown function -1 17406 17954
YP_009146302.1 NC_027329_p57 hypothetical protein phrog_4146 tail protease other 1 37501 37878
YP_009146335.1 NC_027329_p90 hypothetical protein phrog_4427 unknown function unknown function -1 60955 61161
YP_009146274.1 NC_027329_p29 hypothetical protein phrog_4725 unknown function unknown function 1 14874 15404
YP_009146306.1 NC_027329_p61 hypothetical protein phrog_2874 unknown function unknown function 1 39968 40369
YP_009146251.1 NC_027329_p6 hypothetical protein phrog_56 DNA methyltransferase other 1 5330 6214
YP_009146323.1 NC_027329_p78 hypothetical protein phrog_402 unknown function unknown function 1 55225 55338
YP_009146366.1 NC_027329_p121 hypothetical protein phrog_3500 unknown function unknown function 1 83353 83868
YP_009146341.1 NC_027329_p96 minor tail protein phrog_4251 minor tail protein tail 1 65744 66556
YP_009146314.1 NC_027329_p69 hypothetical protein phrog_349 virion structural protein head and packaging 1 46515 46856
YP_009146257.1 NC_027329_p12 hypothetical protein phrog_6082 unknown function unknown function 1 8165 8392
YP_009146297.1 NC_027329_p52 terminase,large subunit phrog_979 terminase large subunit head and packaging 1 32215 33816
YP_009146254.1 NC_027329_p9 hypothetical protein phrog_4180 unknown function unknown function 1 7398 7595
YP_009146270.1 NC_027329_p25 hypothetical protein phrog_4640 unknown function unknown function 1 13792 14025
YP_009146246.1 NC_027329_p1 rIIA phrog_612 RIIA lysis inhibitor lysis 1 1 2292
YP_009146298.1 NC_027329_p53 hypothetical protein phrog_113 portal protein head and packaging 1 33824 35299
YP_009146348.1 NC_027329_p103 hypothetical protein phrog_447 NAD synthetase other 1 71973 72470
YP_009146368.1 NC_027329_p123 hypothetical protein phrog_619 ribose-phosphate pyrophosphokinase other 1 84151 85032
YP_009146319.1 NC_027329_p74 hypothetical protein phrog_4017 baseplate protein tail 1 50347 51204
YP_009146354.1 NC_027329_p109 hypothetical protein phrog_2652 unknown function unknown function 1 76506 76700
YP_009146321.1 NC_027329_p76 long tail fiber protein phrog_2097 tail fiber protein tail 1 51509 52675
YP_009146346.1 NC_027329_p101 hypothetical protein phrog_3877 unknown function unknown function 1 70023 70880
YP_009146320.1 NC_027329_p75 hypothetical protein phrog_4141 unknown function unknown function 1 51204 51506
YP_009146295.1 NC_027329_p50 hypothetical protein phrog_2114 unknown function unknown function 1 30862 31596
YP_009146324.1 NC_027329_p79 hypothetical protein phrog_4038 unknown function unknown function 1 55339 55710
YP_009146309.1 NC_027329_p64 hypothetical protein phrog_280 virion structural protein head and packaging 1 42312 42758
YP_009146280.1 NC_027329_p35 hypothetical protein phrog_4457 unknown function unknown function -1 19180 19404
YP_009146349.1 NC_027329_p104 hypothetical protein phrog_4442 unknown function unknown function 1 72477 72740
YP_009146312.1 NC_027329_p67 tail length tape-measure protein phrog_4036 tail length tape measure protein tail 1 43472 45718
YP_009146250.1 NC_027329_p5 hypothetical protein phrog_2267 unknown function unknown function 1 4814 5278
YP_009146262.1 NC_027329_p17 hypothetical protein phrog_4495 unknown function unknown function 1 10379 10759
YP_009146367.1 NC_027329_p122 hypothetical protein phrog_4726 unknown function unknown function 1 83861 84139
YP_009146329.1 NC_027329_p84 hypothetical protein phrog_4116 unknown function unknown function -1 57983 58342
YP_009146265.1 NC_027329_p20 hypothetical protein phrog_4375 unknown function unknown function 1 11519 11851
YP_009146260.1 NC_027329_p15 hypothetical protein singleton unknown function unknown function 1 9458 9610
YP_009146311.1 NC_027329_p66 hypothetical protein phrog_4963 tail assembly chaperone tail 1 43233 43472
YP_009146285.1 NC_027329_p40 hypothetical protein phrog_4385 unknown function unknown function -1 21201 21494
YP_009146304.1 NC_027329_p59 hypothetical protein phrog_1732 unknown function unknown function 1 39040 39489
YP_009146263.1 NC_027329_p18 hypothetical protein phrog_5089 unknown function unknown function 1 10848 11138
YP_009146305.1 NC_027329_p60 hypothetical protein phrog_222 tail completion or Neck1 protein connector 1 39537 39971
YP_009146308.1 NC_027329_p63 structural protein phrog_205 tail sheath tail 1 40944 42296
YP_009146318.1 NC_027329_p73 hypothetical protein phrog_6 baseplate wedge subunit tail 1 48875 50344
YP_009146317.1 NC_027329_p72 hypothetical protein phrog_120 baseplate wedge subunit tail 1 48456 48875
YP_009146293.1 NC_027329_p48 hypothetical protein phrog_13848 unknown function unknown function 1 29660 29767
YP_009146266.1 NC_027329_p21 hypothetical protein phrog_3436 unknown function unknown function 1 11940 12212
YP_009146253.1 NC_027329_p8 hypothetical protein phrog_1152 Rz-like spanin lysis 1 7085 7432
YP_009146334.1 NC_027329_p89 hypothetical protein phrog_5768 unknown function unknown function -1 60761 60958
YP_009146249.1 NC_027329_p4 hypothetical protein phrog_3970 polynucleotide kinase other 1 4108 4803
YP_009146286.1 NC_027329_p41 hypothetical protein phrog_4348 unknown function unknown function -1 21494 21904
YP_009146261.1 NC_027329_p16 hypothetical protein phrog_15633 unknown function unknown function 1 9894 10085
YP_009146258.1 NC_027329_p13 hypothetical protein phrog_2210 unknown function unknown function 1 8385 8585
YP_009146362.1 NC_027329_p117 anaerobic NTP reductase, small subunit phrog_626 anaerobic ribonucleotide reductase small subunit DNA, RNA and nucleotide metabolism 1 81937 82413
YP_009146331.1 NC_027329_p86 hypothetical protein phrog_4473 unknown function unknown function -1 58636 58848
YP_009146300.1 NC_027329_p55 hypothetical protein phrog_240 head protein head and packaging 1 35799 36131
YP_009146279.1 NC_027329_p34 hypothetical protein phrog_9967 unknown function unknown function -1 18854 19126
YP_009146351.1 NC_027329_p106 hypothetical protein phrog_4007 unknown function unknown function 1 73452 73775
YP_009146277.1 NC_027329_p32 hypothetical protein phrog_4713 unknown function unknown function -1 17968 18432
YP_009146292.1 NC_027329_p47 hypothetical protein phrog_850 RNA-binding protein DNA, RNA and nucleotide metabolism 1 25299 26714
YP_009146339.1 NC_027329_p94 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 62364 65096
YP_009146370.1 NC_027329_p125 hypothetical protein phrog_4262 unknown function unknown function 1 86914 87249
YP_009146343.1 NC_027329_p98 hypothetical protein phrog_4469 unknown function unknown function 1 67370 67570
YP_009146316.1 NC_027329_p71 baseplate protein phrog_11 baseplate spike tail 1 47833 48456
YP_009146352.1 NC_027329_p107 hypothetical protein phrog_3358 unknown function unknown function 1 73768 74106
YP_009146342.1 NC_027329_p97 deoxynucleotide monophosphate kinase phrog_139 deoxynucleoside monophosphate kinase other 1 66603 67361
YP_009146264.1 NC_027329_p19 hypothetical protein phrog_4401 unknown function unknown function 1 11229 11525
YP_009146272.1 NC_027329_p27 hypothetical protein phrog_4318 unknown function unknown function 1 14310 14651
YP_009146281.1 NC_027329_p36 hypothetical protein phrog_4343 unknown function unknown function -1 19481 20014
YP_009146291.1 NC_027329_p46 hypothetical protein phrog_4114 unknown function unknown function 1 24846 25217
YP_009146267.1 NC_027329_p22 hypothetical protein phrog_4327 unknown function unknown function 1 12298 12702
YP_009146273.1 NC_027329_p28 hypothetical protein singleton unknown function unknown function 1 14703 14807
YP_009146359.1 NC_027329_p114 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 79572 80036
YP_009146338.1 NC_027329_p93 hypothetical protein phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 61852 62364
YP_009146369.1 NC_027329_p124 nictotinate phosphoribosyltransferase phrog_448 nicotinamide phosphoribosyl transferase other 1 85061 86860
YP_009146347.1 NC_027329_p102 exodeoxyribonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 70943 71983
YP_009146278.1 NC_027329_p33 hypothetical protein phrog_7193 unknown function unknown function -1 18422 18850
YP_009146248.1 NC_027329_p3 hypothetical protein phrog_600 unknown function unknown function 1 3582 4130
YP_009146303.1 NC_027329_p58 major capsid protein phrog_29 major head protein head and packaging 1 37912 39018
YP_009146310.1 NC_027329_p65 hypothetical protein phrog_1613 tail assembly chaperone tail 1 42832 43230
YP_009146269.1 NC_027329_p24 hypothetical protein phrog_3303 unknown function unknown function 1 13183 13725
YP_009146340.1 NC_027329_p95 hypothetical protein phrog_4039 unknown function unknown function 1 65320 65742
YP_009146307.1 NC_027329_p62 hypothetical protein phrog_4082 unknown function unknown function 1 40344 40943
YP_009146327.1 NC_027329_p82 hypothetical protein phrog_2993 unknown function unknown function -1 57193 57453
YP_009146345.1 NC_027329_p100 hypothetical protein phrog_4424 unknown function unknown function 1 69801 69950
YP_009146301.1 NC_027329_p56 head maturation protease phrog_53 head maturation protease head and packaging 1 36143 37489
YP_009146256.1 NC_027329_p11 hypothetical protein phrog_4453 unknown function unknown function 1 7864 8190
YP_009146356.1 NC_027329_p111 hypothetical protein phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 77770 78012
YP_009146268.1 NC_027329_p23 hypothetical protein phrog_3623 unknown function unknown function 1 12894 13097
YP_009146275.1 NC_027329_p30 hypothetical protein phrog_4559 unknown function unknown function 1 15471 15719
YP_009146328.1 NC_027329_p83 hypothetical protein phrog_4422 unknown function unknown function -1 57454 57969
YP_009146371.1 NC_027329_p126 hypothetical protein phrog_3931 unknown function unknown function 1 87231 87407
YP_009146271.1 NC_027329_p26 hypothetical protein phrog_31746 unknown function unknown function 1 14115 14261
YP_009146337.1 NC_027329_p92 hypothetical protein phrog_4230 unknown function unknown function -1 61588 61800
YP_009146287.1 NC_027329_p42 hypothetical protein phrog_4266 unknown function unknown function -1 21897 22295
YP_009146358.1 NC_027329_p113 oxygen sensitive ribonucleoside-triphosphate reductase phrog_487 NrdD-like anaerobic ribonucleotide reductase large subunit moron, auxiliary metabolic gene and host takeover 1 78260 79459
YP_009146332.1 NC_027329_p87 hypothetical protein phrog_4332 unknown function unknown function -1 58850 59233
YP_009146255.1 NC_027329_p10 hypothetical protein phrog_4391 unknown function unknown function 1 7592 7861
YP_009146288.1 NC_027329_p43 lysis protein phrog_7 endolysin lysis -1 22347 22811
YP_009146315.1 NC_027329_p70 hypothetical protein phrog_196 baseplate hub tail 1 46856 47833
YP_009146350.1 NC_027329_p105 hypothetical protein phrog_2144 MazG-like pyrophosphatase other 1 72716 73471
YP_009146361.1 NC_027329_p116 hypothetical protein phrog_4382 unknown function unknown function 1 81497 81892
YP_009146326.1 NC_027329_p81 dihydrofolate reductase phrog_316 dihydrofolate reductase DNA, RNA and nucleotide metabolism -1 56651 57196
YP_009146355.1 NC_027329_p110 ribonucleoside triphosphate reductase beta chain phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 76697 77770
YP_009146344.1 NC_027329_p99 phage DNA primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 67563 69548
YP_009146296.1 NC_027329_p51 hypothetical protein phrog_4397 unknown function unknown function 1 31993 32193
YP_009146357.1 NC_027329_p112 hypothetical protein phrog_4532 unknown function unknown function 1 78005 78211
YP_009146325.1 NC_027329_p80 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism -1 55750 56649
YP_009146290.1 NC_027329_p45 hypothetical protein phrog_4034 unknown function unknown function -1 23636 24226
YP_009146365.1 NC_027329_p120 hypothetical protein phrog_4462 unknown function unknown function 1 82980 83300
YP_009146313.1 NC_027329_p68 hypothetical protein phrog_3721 unknown function unknown function 1 45718 46515
YP_009146363.1 NC_027329_p118 hypothetical protein phrog_5082 unknown function unknown function 1 82451 82753
YP_009146294.1 NC_027329_p49 hypothetical protein phrog_2143 unknown function unknown function 1 29853 30410
YP_009146283.1 NC_027329_p38 hypothetical protein phrog_4109 unknown function unknown function -1 20283 20864
YP_009146247.1 NC_027329_p2 rIIB phrog_609 RIIB lysis inhibitor lysis 1 2372 3481
YP_009146364.1 NC_027329_p119 hypothetical protein phrog_4425 unknown function unknown function 1 82720 82977