functional categories (each PHROG annotation is associated to a category) | Notes | ||
head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
tail | lysis | other | - Scroll to zoom |
unknown function | - Click on a protein to see its PHROG |
Locus |
NC_027330 |
Definition |
Escherichia phage ECBP5, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Gajwadongvirus; Escherichia virus ECBP5. |
DB of origin |
REFSEQ |
Length |
45403 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
62 |
%GC |
45.89 |
Number of singletons |
12 |
Number of paralogs |
0 |
NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
---|---|---|---|---|---|---|---|---|
YP_009146380.1 | NC_027330_p9 | hypothetical protein | phrog_492 | unknown function | unknown function | 1 | 5181 | 5525 |
YP_009146407.1 | NC_027330_p36 | hypothetical protein | phrog_9033 | unknown function | unknown function | 1 | 21294 | 21500 |
YP_009146399.1 | NC_027330_p28 | oxidoreductase | phrog_704 | DNA repair exonuclease | DNA, RNA and nucleotide metabolism | 1 | 16892 | 18013 |
YP_009146419.1 | NC_027330_p48 | large terminase subunit-like protein | phrog_38 | terminase large subunit | head and packaging | 1 | 36400 | 38250 |
YP_009146376.1 | NC_027330_p5 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1726 | 1911 |
YP_009146417.1 | NC_027330_p46 | hypothetical protein | singleton | unknown function | unknown function | 1 | 35866 | 36099 |
YP_009146384.1 | NC_027330_p13 | DNA helicase | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | 1 | 6603 | 8543 |
YP_009146418.1 | NC_027330_p47 | small terminase subunit-like protein | phrog_891 | terminase small subunit | head and packaging | 1 | 36077 | 36403 |
YP_009146422.1 | NC_027330_p51 | hypothetical protein | phrog_3108 | unknown function | unknown function | 1 | 39369 | 39926 |
YP_009146400.1 | NC_027330_p29 | polynucleotide 5' kinase/3' phosphatase | phrog_415 | polynucleotide kinase | other | 1 | 18053 | 18640 |
YP_009146425.1 | NC_027330_p54 | hypothetical protein | phrog_4712 | holin | lysis | 1 | 40362 | 40511 |
YP_009146382.1 | NC_027330_p11 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5760 | 5948 |
YP_009146420.1 | NC_027330_p49 | hypothetical protein | phrog_1030 | tail needle knob | tail | 1 | 38423 | 39034 |
YP_009146412.1 | NC_027330_p41 | tail tubular protein B | phrog_457 | tail protein | tail | 1 | 25902 | 28292 |
YP_009146393.1 | NC_027330_p22 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 10845 | 13412 |
YP_009146427.1 | NC_027330_p56 | hypothetical protein | phrog_4217 | tail protein | tail | 1 | 40856 | 42484 |
YP_009146431.1 | NC_027330_p60 | hypothetical protein | singleton | unknown function | unknown function | -1 | 44543 | 44659 |
YP_009146388.1 | NC_027330_p17 | hypothetical protein | phrog_2183 | unknown function | unknown function | 1 | 9142 | 9366 |
YP_009146396.1 | NC_027330_p25 | hypothetical protein | phrog_4429 | unknown function | unknown function | 1 | 14876 | 15235 |
YP_009146430.1 | NC_027330_p59 | hypothetical protein | singleton | unknown function | unknown function | 1 | 44032 | 44277 |
YP_009146410.1 | NC_027330_p39 | major capsid protein | phrog_267 | major head protein | head and packaging | 1 | 24092 | 25204 |
YP_009146402.1 | NC_027330_p31 | hypothetical protein | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 19205 | 20158 |
YP_009146391.1 | NC_027330_p20 | hypothetical protein | phrog_1123 | unknown function | unknown function | 1 | 9864 | 10136 |
YP_009146414.1 | NC_027330_p43 | hypothetical protein | phrog_4290 | lysozyme domain-containing protein | lysis | 1 | 28907 | 31051 |
YP_009146403.1 | NC_027330_p32 | hypothetical protein | phrog_32156 | unknown function | unknown function | 1 | 20133 | 20513 |
YP_009146375.1 | NC_027330_p4 | hypothetical protein | phrog_4571 | unknown function | unknown function | 1 | 695 | 1729 |
YP_009146390.1 | NC_027330_p19 | hypothetical protein | singleton | unknown function | unknown function | 1 | 9586 | 9855 |
YP_009146433.1 | NC_027330_p62 | hypothetical protein | phrog_2385 | unknown function | unknown function | 1 | 45003 | 45191 |
YP_009146383.1 | NC_027330_p12 | hypothetical protein | phrog_13307 | unknown function | unknown function | 1 | 6376 | 6528 |
YP_009146413.1 | NC_027330_p42 | hypothetical protein | phrog_805 | internal virion protein | head and packaging | 1 | 28302 | 28907 |
YP_009146416.1 | NC_027330_p45 | tail fiber protein | phrog_2710 | tail fiber protein | tail | 1 | 34937 | 35857 |
YP_009146401.1 | NC_027330_p30 | hypothetical protein | phrog_139 | deoxynucleoside monophosphate kinase | other | 1 | 18637 | 19203 |
YP_009146424.1 | NC_027330_p53 | hypothetical protein | phrog_38226 | unknown function | unknown function | 1 | 40039 | 40353 |
YP_009146423.1 | NC_027330_p52 | hypothetical protein | phrog_1312 | unknown function | unknown function | 1 | 39917 | 40039 |
YP_009146379.1 | NC_027330_p8 | hypothetical protein | phrog_3955 | unknown function | unknown function | 1 | 5008 | 5184 |
YP_009146372.1 | NC_027330_p1 | hypothetical protein | singleton | unknown function | unknown function | 1 | 43 | 234 |
YP_009146373.1 | NC_027330_p2 | hypothetical protein | singleton | unknown function | unknown function | 1 | 234 | 374 |
YP_009146409.1 | NC_027330_p38 | scaffolding protein | phrog_1018 | head scaffolding protein | head and packaging | 1 | 23113 | 23991 |
YP_009146421.1 | NC_027330_p50 | acetyl-CoA acetyltransferase | phrog_2725 | acetyl-CoA acetyltransferase | other | 1 | 39047 | 39325 |
YP_009146381.1 | NC_027330_p10 | hypothetical protein | phrog_31061 | unknown function | unknown function | 1 | 5522 | 5743 |
YP_009146374.1 | NC_027330_p3 | hypothetical protein | singleton | unknown function | unknown function | 1 | 361 | 621 |
YP_009146408.1 | NC_027330_p37 | head-tail connector | phrog_449 | head-tail adaptor | connector | 1 | 21510 | 23102 |
YP_009146389.1 | NC_027330_p18 | hypothetical protein | phrog_29174 | unknown function | unknown function | 1 | 9344 | 9541 |
YP_009146432.1 | NC_027330_p61 | hypothetical protein | phrog_3199 | unknown function | unknown function | 1 | 44662 | 44937 |
YP_009146426.1 | NC_027330_p55 | hypothetical protein | phrog_8971 | Rz-like spanin | lysis | 1 | 40590 | 40799 |
YP_009146411.1 | NC_027330_p40 | tail tubular protein A | phrog_446 | tail protein | tail | 1 | 25264 | 25893 |
YP_009146415.1 | NC_027330_p44 | internal virion-like protein | phrog_342 | internal virion protein with endolysin domain | head and packaging | 1 | 31066 | 34929 |
YP_009146429.1 | NC_027330_p58 | hypothetical protein | singleton | unknown function | unknown function | -1 | 43017 | 43295 |
YP_009146404.1 | NC_027330_p33 | hypothetical protein | phrog_32615 | unknown function | unknown function | 1 | 20497 | 20673 |
YP_009146392.1 | NC_027330_p21 | hypothetical protein | phrog_1614 | nucleotidyltransferase | DNA, RNA and nucleotide metabolism | 1 | 10129 | 10815 |
YP_009146398.1 | NC_027330_p27 | endonuclease | phrog_423 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 16482 | 16889 |
YP_009146387.1 | NC_027330_p16 | hypothetical protein | singleton | unknown function | unknown function | 1 | 8966 | 9145 |
YP_009146428.1 | NC_027330_p57 | tail spike protein | singleton | unknown function | unknown function | 1 | 42568 | 42696 |
YP_009146397.1 | NC_027330_p26 | exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 15406 | 16491 |
YP_009146377.1 | NC_027330_p6 | RNA polymerase | phrog_414 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 1961 | 4594 |
YP_009146395.1 | NC_027330_p24 | hypothetical protein | phrog_862 | unknown function | unknown function | 1 | 13803 | 14567 |
YP_009146406.1 | NC_027330_p35 | acyl-CoA N-acyltransferase domain-containing protein | phrog_1249 | acetyltransferase | other | 1 | 20836 | 21297 |
YP_009146385.1 | NC_027330_p14 | hypothetical protein | phrog_14146 | unknown function | unknown function | 1 | 8543 | 8728 |
YP_009146378.1 | NC_027330_p7 | hypothetical protein | phrog_22253 | unknown function | unknown function | 1 | 4604 | 5008 |
YP_009146386.1 | NC_027330_p15 | hypothetical protein | phrog_37472 | unknown function | unknown function | 1 | 8721 | 8966 |
YP_009146394.1 | NC_027330_p23 | hypothetical protein | phrog_38394 | unknown function | unknown function | 1 | 13462 | 13716 |
YP_009146405.1 | NC_027330_p34 | hypothetical protein | phrog_35369 | unknown function | unknown function | 1 | 20627 | 20857 |