| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_027333 |
Definition |
Propionibacterium phage PHL070N00, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus. |
DB of origin |
REFSEQ |
Length |
29421 |
Host Name |
Propionibacterium acnes |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
44 |
%GC |
54.03 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009146904.1 | NC_027333_p11 | major tail protein | phrog_117 | major tail protein | tail | 1 | 7157 | 7786 |
| YP_009146895.1 | NC_027333_p2 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 373 | 1884 |
| YP_009146901.1 | NC_027333_p8 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 6093 | 6440 |
| YP_009146930.1 | NC_027333_p37 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 24660 | 25013 |
| YP_009146920.1 | NC_027333_p27 | hypothetical protein | phrog_1923 | unknown function | unknown function | -1 | 19319 | 19513 |
| YP_009146932.1 | NC_027333_p39 | hypothetical protein | phrog_1884 | unknown function | unknown function | -1 | 25320 | 25547 |
| YP_009146910.1 | NC_027333_p17 | hypothetical protein | phrog_1910 | lectin | other | 1 | 13405 | 14235 |
| YP_009146934.1 | NC_027333_p41 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26226 | 26537 |
| YP_009146899.1 | NC_027333_p6 | major head protein | phrog_10 | major head protein | head and packaging | 1 | 4639 | 5586 |
| YP_009146909.1 | NC_027333_p16 | protease | phrog_110 | minor tail protein | tail | 1 | 12240 | 13397 |
| YP_009146921.1 | NC_027333_p28 | hypothetical protein | phrog_2548 | unknown function | unknown function | -1 | 19497 | 20054 |
| YP_009146923.1 | NC_027333_p30 | DNA primase | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20662 | 21333 |
| YP_009146914.1 | NC_027333_p21 | holin | phrog_443 | holin | lysis | 1 | 16273 | 16668 |
| YP_009146924.1 | NC_027333_p31 | DNA primase | phrog_2304 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 21170 | 21571 |
| YP_009146929.1 | NC_027333_p36 | exonuclease | phrog_1870 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 23713 | 24660 |
| YP_009146912.1 | NC_027333_p19 | collagen-like protein | phrog_1806 | collagen like minor tail | tail | 1 | 14543 | 15358 |
| YP_009146918.1 | NC_027333_p25 | hypothetical protein | phrog_1340 | unknown function | unknown function | -1 | 17949 | 18269 |
| YP_009146926.1 | NC_027333_p33 | DNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 21887 | 22750 |
| YP_009146916.1 | NC_027333_p23 | sigma factor | phrog_1729 | unknown function | unknown function | -1 | 17247 | 17645 |
| YP_009146907.1 | NC_027333_p14 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 8504 | 11269 |
| YP_009146898.1 | NC_027333_p5 | scaffold protein | phrog_1879 | head scaffolding protein | head and packaging | 1 | 4072 | 4632 |
| YP_009146931.1 | NC_027333_p38 | hypothetical protein | phrog_1937 | unknown function | unknown function | -1 | 25120 | 25323 |
| YP_009146936.1 | NC_027333_p43 | hypothetical protein | phrog_5628 | unknown function | unknown function | 1 | 28871 | 29050 |
| YP_009146925.1 | NC_027333_p32 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 21531 | 21890 |
| YP_009146937.1 | NC_027333_p44 | endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 29069 | 29371 |
| YP_009146915.1 | NC_027333_p22 | hypothetical protein | phrog_2092 | unknown function | unknown function | -1 | 16751 | 17242 |
| YP_009146896.1 | NC_027333_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 1881 | 3206 |
| YP_009146903.1 | NC_027333_p10 | hypothetical protein | phrog_1892 | minor tail protein | tail | 1 | 6733 | 7104 |
| YP_009146927.1 | NC_027333_p34 | hypothetical protein | phrog_1288 | unknown function | unknown function | -1 | 22786 | 23253 |
| YP_009146911.1 | NC_027333_p18 | hypothetical protein | phrog_1958 | minor tail protein | tail | 1 | 14274 | 14540 |
| YP_009146908.1 | NC_027333_p15 | minor tail subunit | phrog_106 | minor tail protein | tail | 1 | 11336 | 12232 |
| YP_009146933.1 | NC_027333_p40 | hypothetical protein | phrog_1908 | unknown function | unknown function | -1 | 25570 | 26103 |
| YP_009146928.1 | NC_027333_p35 | hypothetical protein | phrog_1890 | unknown function | unknown function | -1 | 23306 | 23716 |
| YP_009146935.1 | NC_027333_p42 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26577 | 26885 |
| YP_009146906.1 | NC_027333_p13 | hypothetical protein | phrog_3166 | unknown function | unknown function | 1 | 8209 | 8496 |
| YP_009146913.1 | NC_027333_p20 | endolysin | phrog_670 | endolysin | lysis | 1 | 15397 | 16260 |
| YP_009146894.1 | NC_027333_p1 | excinuclease | phrog_1897 | terminase small subunit | head and packaging | 1 | 2 | 373 |
| YP_009146900.1 | NC_027333_p7 | hypothetical protein | phrog_1290 | head-tail adaptor | connector | 1 | 5612 | 6091 |
| YP_009146919.1 | NC_027333_p26 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18279 | 19322 |
| YP_009146897.1 | NC_027333_p4 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 3213 | 3968 |
| YP_009146902.1 | NC_027333_p9 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 6440 | 6736 |
| YP_009146905.1 | NC_027333_p12 | hypothetical protein | phrog_1927 | tail assembly chaperone | tail | 1 | 7814 | 8110 |
| YP_009146917.1 | NC_027333_p24 | hypothetical protein | phrog_1947 | unknown function | unknown function | -1 | 17649 | 17936 |
| YP_009146922.1 | NC_027333_p29 | hypothetical protein | phrog_1881 | unknown function | unknown function | -1 | 20051 | 20617 |