| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_027336 |
Definition |
Propionibacterium phage PHL009M11, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus. |
DB of origin |
REFSEQ |
Length |
29503 |
Host Name |
Propionibacterium acnes |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
45 |
%GC |
53.93 |
Number of singletons |
1 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009147247.1 | NC_027336_p23 | sigma factor | phrog_1729 | unknown function | unknown function | -1 | 17304 | 17705 |
| YP_009147266.1 | NC_027336_p42 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26631 | 26939 |
| YP_009147250.1 | NC_027336_p26 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18325 | 19371 |
| YP_009147253.1 | NC_027336_p29 | hypothetical protein | phrog_1881 | unknown function | unknown function | -1 | 20100 | 20666 |
| YP_009147240.1 | NC_027336_p16 | protease | phrog_110 | minor tail protein | tail | 1 | 12260 | 13417 |
| YP_009147238.1 | NC_027336_p14 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 8524 | 11289 |
| YP_009147252.1 | NC_027336_p28 | hypothetical protein | phrog_2548 | unknown function | unknown function | -1 | 19546 | 20103 |
| YP_009147249.1 | NC_027336_p25 | hypothetical protein | phrog_1340 | unknown function | unknown function | -1 | 17994 | 18314 |
| YP_009147231.1 | NC_027336_p7 | hypothetical protein | phrog_1290 | head-tail adaptor | connector | 1 | 5614 | 6093 |
| YP_009147235.1 | NC_027336_p11 | major tail protein | phrog_117 | major tail protein | tail | 1 | 7165 | 7806 |
| YP_009147259.1 | NC_027336_p35 | hypothetical protein | phrog_1890 | unknown function | unknown function | -1 | 23362 | 23772 |
| YP_009147228.1 | NC_027336_p4 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 3218 | 3973 |
| YP_009147251.1 | NC_027336_p27 | hypothetical protein | phrog_1923 | unknown function | unknown function | -1 | 19368 | 19562 |
| YP_009147258.1 | NC_027336_p34 | hypothetical protein | phrog_1288 | unknown function | unknown function | -1 | 22841 | 23311 |
| YP_009147260.1 | NC_027336_p36 | exonuclease | phrog_1870 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 23769 | 24716 |
| YP_009147245.1 | NC_027336_p21 | holin | phrog_443 | holin | lysis | 1 | 16296 | 16697 |
| YP_009147237.1 | NC_027336_p13 | hypothetical protein | phrog_3166 | unknown function | unknown function | 1 | 8226 | 8516 |
| YP_009147244.1 | NC_027336_p20 | endolysin | phrog_670 | endolysin | lysis | 1 | 15423 | 16283 |
| YP_009147254.1 | NC_027336_p30 | DNA primase | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20710 | 21381 |
| YP_009147263.1 | NC_027336_p39 | hypothetical protein | phrog_1884 | unknown function | unknown function | -1 | 25381 | 25608 |
| YP_009147264.1 | NC_027336_p40 | hypothetical protein | phrog_1908 | unknown function | unknown function | -1 | 25626 | 26159 |
| YP_009147246.1 | NC_027336_p22 | hypothetical protein | phrog_2092 | unknown function | unknown function | -1 | 16784 | 17299 |
| YP_009147248.1 | NC_027336_p24 | hypothetical protein | phrog_1947 | unknown function | unknown function | -1 | 17709 | 17975 |
| YP_009147233.1 | NC_027336_p9 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 6449 | 6739 |
| YP_009147265.1 | NC_027336_p41 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26280 | 26591 |
| YP_009147242.1 | NC_027336_p18 | hypothetical protein | phrog_1958 | minor tail protein | tail | 1 | 14296 | 14562 |
| YP_009147232.1 | NC_027336_p8 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 6095 | 6442 |
| YP_009147234.1 | NC_027336_p10 | hypothetical protein | phrog_1892 | minor tail protein | tail | 1 | 6736 | 7107 |
| YP_009147268.1 | NC_027336_p44 | hypothetical protein | phrog_7333 | unknown function | unknown function | 1 | 28982 | 29152 |
| YP_009147269.1 | NC_027336_p45 | endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 29149 | 29454 |
| YP_009147257.1 | NC_027336_p33 | DNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 21935 | 22798 |
| YP_009147262.1 | NC_027336_p38 | hypothetical protein | phrog_1937 | unknown function | unknown function | -1 | 25181 | 25384 |
| YP_009147230.1 | NC_027336_p6 | major head protein | phrog_10 | major head protein | head and packaging | 1 | 4641 | 5588 |
| YP_009147243.1 | NC_027336_p19 | collagen-like protein | phrog_1806 | collagen like minor tail | tail | 1 | 14565 | 15371 |
| YP_009147236.1 | NC_027336_p12 | hypothetical protein | phrog_1927 | tail assembly chaperone | tail | 1 | 7834 | 8130 |
| YP_009147239.1 | NC_027336_p15 | minor tail subunit | phrog_106 | minor tail protein | tail | 1 | 11305 | 12252 |
| YP_009147241.1 | NC_027336_p17 | hypothetical protein | phrog_1910 | lectin | other | 1 | 13436 | 14254 |
| YP_009147255.1 | NC_027336_p31 | DNA primase | phrog_2304 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 21218 | 21619 |
| YP_009147227.1 | NC_027336_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 1886 | 3211 |
| YP_009147229.1 | NC_027336_p5 | scaffold protein | phrog_1879 | head scaffolding protein | head and packaging | 1 | 4077 | 4634 |
| YP_009147225.1 | NC_027336_p1 | excinuclease | phrog_1897 | terminase small subunit | head and packaging | 1 | 50 | 373 |
| YP_009147256.1 | NC_027336_p32 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 21579 | 21935 |
| YP_009147267.1 | NC_027336_p43 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28635 | 28721 |
| YP_009147226.1 | NC_027336_p2 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 378 | 1889 |
| YP_009147261.1 | NC_027336_p37 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 24716 | 25075 |