Genomic map of Lactococcus phage WRP3 (NC_027341)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_027341
Definition
Lactococcus phage WRP3, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
130008
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
178
%GC
32.35
Number of singletons
4
Number of paralogs
4

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009147658.1 NC_027341_p1 integrase phrog_1 integrase integration and excision 1 139 1158
YP_009147820.1 NC_027341_p163 structural protein phrog_5251 unknown function unknown function -1 115686 116438
YP_009147806.1 NC_027341_p149 tail protein phrog_372 tail protein tail -1 89717 91549
YP_009147737.1 NC_027341_p80 hypothetical protein phrog_4188 unknown function unknown function 1 43368 43520
YP_009147687.1 NC_027341_p30 hypothetical protein phrog_8151 unknown function unknown function 1 13883 14203
YP_009147705.1 NC_027341_p48 hypothetical protein phrog_8461 unknown function unknown function 1 24995 25246
YP_009147670.1 NC_027341_p13 hypothetical protein singleton unknown function unknown function 1 8066 8275
YP_009147714.1 NC_027341_p57 hypothetical protein phrog_8553 unknown function unknown function 1 28412 28807
YP_009147802.1 NC_027341_p145 hypothetical protein phrog_8457 unknown function unknown function 1 87829 88074
YP_009147745.1 NC_027341_p88 hypothetical protein phrog_8664 unknown function unknown function 1 45809 46261
YP_009147788.1 NC_027341_p131 hypothetical protein phrog_21230 unknown function unknown function 1 77885 78154
YP_009147689.1 NC_027341_p32 hypothetical protein phrog_31640 unknown function unknown function -1 16616 16792
YP_009147770.1 NC_027341_p113 hypothetical protein phrog_3458 unknown function unknown function 1 67215 67412
YP_009147718.1 NC_027341_p61 hypothetical protein phrog_2367 unknown function unknown function 1 31248 32450
YP_009147697.1 NC_027341_p40 hypothetical protein singleton unknown function unknown function -1 19527 19769
YP_009147742.1 NC_027341_p85 hypothetical protein phrog_8499 unknown function unknown function 1 44908 45144
YP_009147772.1 NC_027341_p115 ribonucleotide diphosphate reductase glutaredoxin subunit phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 67746 67985
YP_009147800.1 NC_027341_p143 hypothetical protein phrog_9397 unknown function unknown function 1 87010 87342
YP_009147672.1 NC_027341_p15 hypothetical protein phrog_8459 unknown function unknown function 1 8428 8661
YP_009147750.1 NC_027341_p93 hypothetical protein phrog_2376 ATPase other 1 47631 48707
YP_009147815.1 NC_027341_p158 hypothetical protein phrog_8692 unknown function unknown function -1 112758 113135
YP_009147833.1 NC_027341_p176 hypothetical protein phrog_8012 unknown function unknown function -1 128133 128396
YP_009147683.1 NC_027341_p26 hypothetical protein phrog_9894 unknown function unknown function 1 12336 12500
YP_009147719.1 NC_027341_p62 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 32542 33585
YP_009147767.1 NC_027341_p110 ribonucleoside triphosphate reductase activator small subunit phrog_626 anaerobic ribonucleotide reductase small subunit DNA, RNA and nucleotide metabolism 1 64320 64916
YP_009147680.1 NC_027341_p23 hypothetical protein phrog_26503 unknown function unknown function 1 11292 11558
YP_009147712.1 NC_027341_p55 hypothetical protein phrog_2228 unknown function unknown function 1 27337 27723
YP_009147691.1 NC_027341_p34 hypothetical protein phrog_8376 unknown function unknown function -1 17392 17763
YP_009147725.1 NC_027341_p68 hypothetical protein phrog_6484 unknown function unknown function 1 39265 39552
YP_009147754.1 NC_027341_p97 hypothetical protein phrog_8362 unknown function unknown function 1 49876 50121
YP_009147684.1 NC_027341_p27 hypothetical protein phrog_121 unknown function unknown function 1 12634 13245
YP_009147738.1 NC_027341_p81 hypothetical protein phrog_9207 unknown function unknown function 1 43811 44116
YP_009147669.1 NC_027341_p12 hypothetical protein phrog_8833 unknown function unknown function 1 7610 8011
YP_009147721.1 NC_027341_p64 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 34317 35861
YP_009147732.1 NC_027341_p75 hypothetical protein phrog_21629 unknown function unknown function 1 41417 41794
YP_009147699.1 NC_027341_p42 hypothetical protein phrog_9313 unknown function unknown function -1 20093 20380
YP_009147764.1 NC_027341_p107 nucleoside-2-deoxyribosyltransferase phrog_1817 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 60570 61088
YP_009147717.1 NC_027341_p60 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 30916 31149
YP_009147765.1 NC_027341_p108 nicotinamide mononucleotide transporter phrog_1880 PnuC-like nicotinamide mononucleotide transport moron, auxiliary metabolic gene and host takeover 1 61081 61740
YP_009147784.1 NC_027341_p127 HTH homing endonuclease phrog_2081 HNH endonuclease DNA, RNA and nucleotide metabolism 1 75235 75933
YP_009147755.1 NC_027341_p98 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 50208 50801
YP_009147821.1 NC_027341_p164 hypothetical protein phrog_5523 unknown function unknown function -1 116440 116748
YP_009147704.1 NC_027341_p47 hypothetical protein phrog_8839 unknown function unknown function 1 24424 25002
YP_009147674.1 NC_027341_p17 hypothetical protein phrog_18545 unknown function unknown function 1 8887 9339
YP_009147807.1 NC_027341_p150 tail protein phrog_10693 host range and adsorption protein moron, auxiliary metabolic gene and host takeover -1 91549 94074
YP_009147736.1 NC_027341_p79 hypothetical protein phrog_16072 unknown function unknown function 1 43031 43324
YP_009147804.1 NC_027341_p147 holin phrog_608 holin lysis -1 88824 89231
YP_009147696.1 NC_027341_p39 hypothetical protein phrog_11685 unknown function unknown function -1 18991 19191
YP_009147733.1 NC_027341_p76 hypothetical protein phrog_18583 unknown function unknown function 1 41828 42142
YP_009147661.1 NC_027341_p4 transglycosylase phrog_4602 transglycosylase other 1 4255 4947
YP_009147823.1 NC_027341_p166 hypothetical protein phrog_5329 unknown function unknown function -1 117196 117858
YP_009147757.1 NC_027341_p100 hypothetical protein singleton unknown function unknown function 1 53111 53245
YP_009147660.1 NC_027341_p3 hypothetical protein phrog_8504 unknown function unknown function 1 3584 4198
YP_009147735.1 NC_027341_p78 replicator initiation protein phrog_9516 replication initiation protein DNA, RNA and nucleotide metabolism 1 42595 42984
YP_009147663.1 NC_027341_p6 hypothetical protein phrog_1485 unknown function unknown function 1 5470 5823
YP_009147774.1 NC_027341_p117 ribonucleotide diphosphate reductase subunit aplpha phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 68363 70552
YP_009147810.1 NC_027341_p153 tail component phrog_33 distal tail protein Dit tail -1 99674 100438
YP_009147805.1 NC_027341_p148 hypothetical protein phrog_1382 unknown function unknown function -1 89246 89404
YP_009147747.1 NC_027341_p90 hypothetical protein phrog_8755 unknown function unknown function 1 46805 47068
YP_009147752.1 NC_027341_p95 hypothetical protein phrog_9951 unknown function unknown function 1 49087 49509
YP_009147703.1 NC_027341_p46 Zn-finger protein phrog_9029 unknown function unknown function 1 24284 24427
YP_009147706.1 NC_027341_p49 hypothetical protein phrog_17000 unknown function unknown function 1 25249 25635
YP_009147729.1 NC_027341_p72 hypothetical protein phrog_16758 unknown function unknown function 1 40647 40832
YP_009147715.1 NC_027341_p58 hypothetical protein phrog_8387 unknown function unknown function 1 28804 29562
YP_009147679.1 NC_027341_p22 hypothetical protein phrog_6648 unknown function unknown function 1 10969 11292
YP_009147790.1 NC_027341_p133 ribonucleotide diphosphate reductas alpha subunit phrog_6397 ribonucleotide reductase large subunit DNA, RNA and nucleotide metabolism 1 78445 79359
YP_009147665.1 NC_027341_p8 hypothetical protein phrog_8541 unknown function unknown function 1 6185 6409
YP_009147759.1 NC_027341_p102 DNA gyrase phrog_543 DNA topoisomerase II large subunit DNA, RNA and nucleotide metabolism 1 54956 56923
YP_009147761.1 NC_027341_p104 adenine methyltransferase phrog_56 DNA methyltransferase other 1 59057 59899
YP_009147709.1 NC_027341_p52 hypothetical protein phrog_18439 unknown function unknown function 1 26357 26719
YP_009147787.1 NC_027341_p130 hypothetical protein phrog_5083 unknown function unknown function 1 77310 77879
YP_009147831.1 NC_027341_p174 phosphate-starvation-inducible protein PhoH/ATPase phrog_2765 PhoH-like phosphate starvation-inducible other -1 126459 127784
YP_009147825.1 NC_027341_p168 structural protein phrog_4147 unknown function unknown function -1 118979 119500
YP_009147803.1 NC_027341_p146 holliday junction endonuclease phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 88090 88770
YP_009147812.1 NC_027341_p155 integrase/site specific recombinase phrog_1 integrase integration and excision -1 110512 111504
YP_009147678.1 NC_027341_p21 hypothetical protein phrog_3808 unknown function unknown function 1 10715 10972
YP_009147711.1 NC_027341_p54 hypothetical protein phrog_3604 unknown function unknown function 1 27031 27243
YP_009147801.1 NC_027341_p144 hypothetical protein phrog_8668 unknown function unknown function 1 87345 87695
YP_009147830.1 NC_027341_p173 DNA polymerase phrog_284 exonuclease DNA, RNA and nucleotide metabolism -1 125203 126450
YP_009147686.1 NC_027341_p29 hypothetical protein phrog_8622 unknown function unknown function 1 13587 13880
YP_009147796.1 NC_027341_p139 hypothetical protein phrog_8636 unknown function unknown function 1 82872 83207
YP_009147826.1 NC_027341_p169 structural protein phrog_3313 unknown function unknown function -1 119529 120800
YP_009147819.1 NC_027341_p162 structural protein phrog_6123 virion structural protein head and packaging -1 115081 115686
YP_009147748.1 NC_027341_p91 hypothetical protein phrog_11525 unknown function unknown function 1 47070 47318
YP_009147782.1 NC_027341_p125 hypothetical protein phrog_8819 unknown function unknown function 1 74376 74732
YP_009147762.1 NC_027341_p105 hypothetical protein phrog_8616 unknown function unknown function 1 59925 60221
YP_009147744.1 NC_027341_p87 hypothetical protein phrog_1174 unknown function unknown function 1 45448 45744
YP_009147779.1 NC_027341_p122 hypothetical protein phrog_9035 unknown function unknown function 1 73605 73751
YP_009147664.1 NC_027341_p7 hypothetical protein phrog_8534 unknown function unknown function 1 5853 6188
YP_009147730.1 NC_027341_p73 hypothetical protein phrog_31949 unknown function unknown function 1 40975 41190
YP_009147809.1 NC_027341_p152 tail protein phrog_8704 tail protein tail -1 95362 99567
YP_009147769.1 NC_027341_p112 hypothetical protein phrog_1075 tRNA splicing ligase DNA, RNA and nucleotide metabolism 1 65990 67213
YP_009147766.1 NC_027341_p109 anaerobic ribonucleoside triphosphate reductase phrog_487 NrdD-like anaerobic ribonucleotide reductase large subunit moron, auxiliary metabolic gene and host takeover 1 61819 64320
YP_009147756.1 NC_027341_p99 hypothetical protein phrog_6282 unknown function unknown function 1 52511 53026
YP_009147828.1 NC_027341_p171 terminase family protein phrog_2 terminase large subunit head and packaging -1 122377 124074
YP_009147827.1 NC_027341_p170 structural protein phrog_2739 portal protein head and packaging -1 120812 122353
YP_009147708.1 NC_027341_p51 hypothetical protein phrog_1905 unknown function unknown function 1 25913 26347
YP_009147740.1 NC_027341_p83 hypothetical protein phrog_10013 unknown function unknown function 1 44527 44706
YP_009147677.1 NC_027341_p20 hypothetical protein phrog_289 GTP-binding domain other 1 10336 10713
YP_009147690.1 NC_027341_p33 hypothetical protein phrog_10208 unknown function unknown function -1 16927 17316
YP_009147698.1 NC_027341_p41 hypothetical protein phrog_4264 unknown function unknown function -1 19780 20031
YP_009147749.1 NC_027341_p92 hypothetical protein singleton unknown function unknown function 1 47344 47529
YP_009147795.1 NC_027341_p138 hypothetical protein phrog_7920 unknown function unknown function 1 82250 82882
YP_009147775.1 NC_027341_p118 hypothetical protein phrog_559 HNH endonuclease DNA, RNA and nucleotide metabolism 1 70637 71551
YP_009147726.1 NC_027341_p69 hypothetical protein phrog_8350 unknown function unknown function 1 39563 39784
YP_009147751.1 NC_027341_p94 hypothetical protein phrog_4997 unknown function unknown function 1 48855 49085
YP_009147692.1 NC_027341_p35 hypothetical protein phrog_8724 unknown function unknown function -1 17773 17964
YP_009147793.1 NC_027341_p136 protease phrog_3677 protease other 1 80936 81697
YP_009147695.1 NC_027341_p38 hypothetical protein phrog_9706 unknown function unknown function -1 18759 18920
YP_009147731.1 NC_027341_p74 hypothetical protein phrog_20409 unknown function unknown function 1 41184 41417
YP_009147671.1 NC_027341_p14 transglycosylase phrog_37432 transglycosylase other 1 8272 8409
YP_009147799.1 NC_027341_p142 hypothetical protein phrog_17864 unknown function unknown function 1 86722 86997
YP_009147771.1 NC_027341_p114 hypothetical protein phrog_8513 unknown function unknown function 1 67431 67682
YP_009147728.1 NC_027341_p71 hypothetical protein phrog_1123 unknown function unknown function 1 40351 40650
YP_009147794.1 NC_027341_p137 hypothetical protein phrog_6081 unknown function unknown function 1 81687 82208
YP_009147758.1 NC_027341_p101 hypothetical protein phrog_1491 tail fiber protein tail 1 53813 54469
YP_009147822.1 NC_027341_p165 structural protein phrog_3853 unknown function unknown function -1 116735 117175
YP_009147700.1 NC_027341_p43 hypothetical protein phrog_24136 unknown function unknown function -1 20642 21016
YP_009147811.1 NC_027341_p154 tail tape measure protein phrog_4211 tail length tape measure protein tail -1 100490 110494
YP_009147673.1 NC_027341_p16 hypothetical protein phrog_16271 unknown function unknown function 1 8645 8890
YP_009147681.1 NC_027341_p24 hypothetical protein phrog_7574 unknown function unknown function 1 11539 12060
YP_009147713.1 NC_027341_p56 nucleotidase phrog_8630 nucleotidase DNA, RNA and nucleotide metabolism 1 27826 28425
YP_009147773.1 NC_027341_p116 ribonucleotide reductase stimulatory protein phrog_883 flavodoxin moron, auxiliary metabolic gene and host takeover 1 67978 68349
YP_009147741.1 NC_027341_p84 hypothetical protein phrog_8586 unknown function unknown function 1 44679 44918
YP_009147798.1 NC_027341_p141 hypothetical protein phrog_9412 unknown function unknown function 1 86549 86725
YP_009147662.1 NC_027341_p5 hypothetical protein phrog_8338 unknown function unknown function 1 5071 5454
YP_009147753.1 NC_027341_p96 hypothetical protein phrog_9179 unknown function unknown function 1 49511 49873
YP_009147743.1 NC_027341_p86 hypothetical protein phrog_8756 unknown function unknown function 1 45144 45437
YP_009147675.1 NC_027341_p18 hypothetical protein phrog_8095 unknown function unknown function 1 9340 9564
YP_009147791.1 NC_027341_p134 guanylate kinase phrog_1815 guanylate kinase other 1 79438 80118
YP_009147777.1 NC_027341_p120 hypothetical protein phrog_559 HNH endonuclease DNA, RNA and nucleotide metabolism 1 72057 72593
YP_009147792.1 NC_027341_p135 deoxyuridine 5'-triphosphate nucleotidohydrolase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 80096 80839
YP_009147781.1 NC_027341_p124 hypothetical protein phrog_9195 unknown function unknown function 1 73971 74366
YP_009147685.1 NC_027341_p28 hypothetical protein phrog_8798 unknown function unknown function 1 13250 13585
YP_009147814.1 NC_027341_p157 hypothetical protein phrog_8587 unknown function unknown function -1 112072 112689
YP_009147668.1 NC_027341_p11 thymidine kinase phrog_592 thymidine kinase other 1 7090 7686
YP_009147727.1 NC_027341_p70 hypothetical protein phrog_11247 unknown function unknown function 1 39786 40265
YP_009147780.1 NC_027341_p123 hypothetical protein phrog_8612 unknown function unknown function 1 73748 73969
YP_009147667.1 NC_027341_p10 hypothetical protein phrog_18401 unknown function unknown function 1 6664 7020
YP_009147768.1 NC_027341_p111 hypothetical protein phrog_559 HNH endonuclease DNA, RNA and nucleotide metabolism 1 64992 65921
YP_009147722.1 NC_027341_p65 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 35873 36922
YP_009147734.1 NC_027341_p77 hypothetical protein phrog_3808 unknown function unknown function 1 42233 42598
YP_009147666.1 NC_027341_p9 hypothetical protein phrog_8658 unknown function unknown function 1 6409 6660
YP_009147760.1 NC_027341_p103 DNA gyrase subunit A-topoisomerase phrog_551 DNA topoisomerase II DNA, RNA and nucleotide metabolism 1 56925 59039
YP_009147688.1 NC_027341_p31 hypothetical protein phrog_8431 unknown function unknown function -1 15682 16206
YP_009147659.1 NC_027341_p2 exodeoxyribonuclease phrog_4412 exonuclease V DNA, RNA and nucleotide metabolism 1 1167 3491
YP_009147813.1 NC_027341_p156 structural protein phrog_7299 virion structural protein head and packaging -1 111501 111980
YP_009147693.1 NC_027341_p36 hypothetical protein phrog_8271 unknown function unknown function -1 17961 18287
YP_009147783.1 NC_027341_p126 nucleoside phosphate reductase phrog_9530 ribonucleotide reductase DNA, RNA and nucleotide metabolism 1 74812 75138
YP_009147682.1 NC_027341_p25 hypothetical protein phrog_6072 unknown function unknown function 1 12057 12302
YP_009147816.1 NC_027341_p159 hypothetical protein phrog_8442 unknown function unknown function -1 113122 113541
YP_009147710.1 NC_027341_p53 hypothetical protein phrog_19030 unknown function unknown function 1 26713 26910
YP_009147694.1 NC_027341_p37 hypothetical protein phrog_15998 unknown function unknown function -1 18367 18621
YP_009147701.1 NC_027341_p44 hypothetical protein phrog_8645 unknown function unknown function -1 21089 21445
YP_009147834.1 NC_027341_p177 hypothetical protein phrog_8285 unknown function unknown function -1 128393 128725
YP_009147739.1 NC_027341_p82 hypothetical protein phrog_8481 unknown function unknown function 1 44109 44444
YP_009147808.1 NC_027341_p151 hypothetical protein phrog_3267 tail protein tail -1 94225 95346
YP_009147829.1 NC_027341_p172 hypothetical protein phrog_3314 unknown function unknown function -1 124077 125105
YP_009147797.1 NC_027341_p140 DNA polymerase III alpha subunit phrog_405 DNA polymerase DNA, RNA and nucleotide metabolism 1 83304 86465
YP_009147786.1 NC_027341_p129 ribonucleoside diphosphate reductase phrog_7909 ribonucleoside-diphosphate reductase beta subunit DNA, RNA and nucleotide metabolism 1 76954 77232
YP_009147676.1 NC_027341_p19 hypothetical protein phrog_8701 unknown function unknown function 1 9518 9775
YP_009147789.1 NC_027341_p132 hypothetical protein phrog_9040 unknown function unknown function 1 78180 78455
YP_009147785.1 NC_027341_p128 ribonucleoside triphosphate reductase activator small subunit phrog_9465 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 76178 76423
YP_009147702.1 NC_027341_p45 hypothetical protein phrog_8325 unknown function unknown function 1 23999 24190
YP_009147817.1 NC_027341_p160 structural protein phrog_2729 virion structural protein head and packaging -1 113612 114316
YP_009147746.1 NC_027341_p89 hypothetical protein phrog_8802 unknown function unknown function 1 46265 46486
YP_009147716.1 NC_027341_p59 endolysin phrog_3393 endolysin lysis 1 29668 30726
YP_009147763.1 NC_027341_p106 hypothetical protein phrog_8518 unknown function unknown function 1 60214 60570
YP_009147824.1 NC_027341_p167 structural protein phrog_4088 unknown function unknown function -1 117921 118940
YP_009147832.1 NC_027341_p175 hypothetical protein phrog_379 DNA binding protein DNA, RNA and nucleotide metabolism -1 127768 128136
YP_009147723.1 NC_027341_p66 ssDNA exonuclease phrog_2484 RecJ-like ssDNA exonuclease DNA, RNA and nucleotide metabolism 1 36929 38710
YP_009147720.1 NC_027341_p63 hypothetical protein phrog_6344 unknown function unknown function 1 33690 34307
YP_009147835.1 NC_027341_p178 hypothetical protein phrog_8340 unknown function unknown function -1 128706 129176
YP_009147778.1 NC_027341_p121 hypothetical protein phrog_9300 unknown function unknown function 1 72657 73397
YP_009147707.1 NC_027341_p50 hypothetical protein phrog_20816 unknown function unknown function 1 25713 25916
YP_009147776.1 NC_027341_p119 hypothetical protein phrog_8864 unknown function unknown function 1 71564 71974
YP_009147724.1 NC_027341_p67 hypothetical protein phrog_5105 unknown function unknown function 1 38718 39257
YP_009147818.1 NC_027341_p161 hypothetical protein phrog_4051 unknown function unknown function -1 114336 115097