| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_027342 |
Definition |
Proteus phage PM16, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Slopekvirinae; Novosibovirus; Proteus virus PM16. |
DB of origin |
REFSEQ |
Length |
41268 |
Host Name |
Proteus mirabilis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
46 |
%GC |
41.38 |
Number of singletons |
17 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009147848.1 | NC_027342_p13 | DNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 6818 | 8104 |
| YP_009147864.1 | NC_027342_p29 | head-tail connector protein | phrog_449 | head-tail adaptor | connector | 1 | 20125 | 21555 |
| YP_009147859.1 | NC_027342_p24 | DNA endonuclease VII | phrog_423 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 16023 | 16445 |
| YP_009147845.1 | NC_027342_p10 | hypothetical protein | phrog_14146 | unknown function | unknown function | 1 | 5678 | 5872 |
| YP_009147850.1 | NC_027342_p15 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 8288 | 10690 |
| YP_009147851.1 | NC_027342_p16 | nucleotidyltransferase | phrog_1614 | nucleotidyltransferase | DNA, RNA and nucleotide metabolism | 1 | 10701 | 11264 |
| YP_009147874.1 | NC_027342_p40 | DNA maturase B | phrog_38 | terminase large subunit | head and packaging | 1 | 35224 | 37110 |
| YP_009147866.1 | NC_027342_p31 | capsid protein | phrog_267 | major head protein | head and packaging | 1 | 22401 | 23402 |
| YP_009147853.1 | NC_027342_p18 | hypothetical protein | phrog_139 | deoxynucleoside monophosphate kinase | other | 1 | 12542 | 12964 |
| YP_009147847.1 | NC_027342_p12 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 6061 | 6834 |
| YP_009147840.1 | NC_027342_p5 | hypothetical protein | singleton | unknown function | unknown function | 1 | 3931 | 4257 |
| YP_009147858.1 | NC_027342_p23 | 5'-3' exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 14948 | 15877 |
| YP_009147877.1 | NC_027342_p43 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37902 | 38198 |
| YP_009147860.1 | NC_027342_p25 | hypothetical protein | singleton | unknown function | unknown function | 1 | 16557 | 16766 |
| YP_009147863.1 | NC_027342_p28 | virion protein | phrog_3112 | virion structural protein | head and packaging | 1 | 19731 | 20015 |
| YP_009147842.1 | NC_027342_p7 | hypothetical protein | phrog_19860 | unknown function | unknown function | 1 | 4712 | 4924 |
| YP_009147857.1 | NC_027342_p22 | hypothetical protein | singleton | unknown function | unknown function | 1 | 14712 | 14945 |
| YP_009147849.1 | NC_027342_p14 | hypothetical protein | singleton | unknown function | unknown function | 1 | 8101 | 8295 |
| YP_009147867.1 | NC_027342_p33 | tail tubular protein A | phrog_446 | tail protein | tail | 1 | 23667 | 24224 |
| YP_009147865.1 | NC_027342_p30 | scaffolding protein | phrog_1018 | head scaffolding protein | head and packaging | 1 | 21555 | 22334 |
| YP_009147841.1 | NC_027342_p6 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4548 | 4715 |
| YP_009147844.1 | NC_027342_p9 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5367 | 5708 |
| YP_009147856.1 | NC_027342_p21 | hypothetical protein | singleton | unknown function | unknown function | 1 | 14350 | 14715 |
| YP_009147869.1 | NC_027342_p35 | internal virion protein | phrog_4295 | internal virion protein | head and packaging | 1 | 26570 | 27214 |
| YP_009147872.1 | NC_027342_p38 | tail fiber protein | phrog_2710 | tail fiber protein | tail | 1 | 33885 | 34922 |
| YP_009167330.1 | NC_027342_p32 | virion protein | singleton | unknown function | unknown function | 1 | 23412 | 23552 |
| YP_009147843.1 | NC_027342_p8 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5144 | 5401 |
| YP_009147837.1 | NC_027342_p2 | hypothetical protein | phrog_37123 | unknown function | unknown function | 1 | 3004 | 3219 |
| YP_009147862.1 | NC_027342_p27 | hypothetical protein | singleton | unknown function | unknown function | 1 | 19333 | 19734 |
| YP_009147876.1 | NC_027342_p42 | hypothetical protein | phrog_1804 | Rz-like spanin | lysis | 1 | 37531 | 37935 |
| YP_009147873.1 | NC_027342_p39 | DNA maturase A | phrog_891 | terminase small subunit | head and packaging | 1 | 34915 | 35214 |
| YP_009147836.1 | NC_027342_p1 | hypothetical protein | phrog_26259 | unknown function | unknown function | 1 | 2262 | 2861 |
| YP_009147880.1 | NC_027342_p46 | hypothetical protein | singleton | unknown function | unknown function | 1 | 40798 | 40968 |
| YP_009147839.1 | NC_027342_p4 | hypothetical protein | singleton | unknown function | unknown function | 1 | 3725 | 3928 |
| YP_009147852.1 | NC_027342_p17 | hypothetical protein | phrog_221 | metallo-phosphoesterase | other | 1 | 11354 | 12340 |
| YP_009147846.1 | NC_027342_p11 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5865 | 6068 |
| YP_009147870.1 | NC_027342_p36 | internal virion protein | phrog_2083 | internal virion lysozyme motif | head and packaging | 1 | 27224 | 29977 |
| YP_009147879.1 | NC_027342_p45 | virion protein | singleton | unknown function | unknown function | 1 | 38708 | 40777 |
| YP_009147861.1 | NC_027342_p26 | DNA-dependent RNA polymerase | phrog_414 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 16776 | 19211 |
| YP_009147855.1 | NC_027342_p20 | hypothetical protein | phrog_862 | unknown function | unknown function | 1 | 13479 | 14270 |
| YP_009147878.1 | NC_027342_p44 | endolysin | phrog_7 | endolysin | lysis | 1 | 38176 | 38715 |
| YP_009147854.1 | NC_027342_p19 | hypothetical protein | singleton | unknown function | unknown function | 1 | 13045 | 13419 |
| YP_009147871.1 | NC_027342_p37 | internal core protein | phrog_342 | internal virion protein with endolysin domain | head and packaging | 1 | 30043 | 33882 |
| YP_009147868.1 | NC_027342_p34 | tail tubular protein B | phrog_457 | tail protein | tail | 1 | 24233 | 26569 |
| YP_009147838.1 | NC_027342_p3 | hypothetical protein | phrog_6314 | unknown function | unknown function | 1 | 3501 | 3728 |
| YP_009147875.2 | NC_027342_p41 | virion protein | singleton | unknown function | unknown function | 1 | 37130 | 37513 |