Genomic map of Pseudomonas phage Pa2 (NC_027345)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_027345
Definition
Pseudomonas phage Pa2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Litunavirus; unclassified Litunavirus.
DB of origin
REFSEQ
Length
73008
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
91
%GC
54.85
Number of singletons
0
Number of paralogs
3

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009148249.1 NC_027345_p69 hypothetical protein phrog_7891 unknown function unknown function 1 44305 44622
YP_009148186.1 NC_027345_p6 hypothetical protein phrog_2614 unknown function unknown function 1 1818 2126
YP_009148198.1 NC_027345_p18 hypothetical protein phrog_8585 unknown function unknown function 1 5542 5892
YP_009148219.1 NC_027345_p39 hypothetical protein phrog_12945 ferredoxin moron, auxiliary metabolic gene and host takeover 1 21128 21352
YP_009148226.1 NC_027345_p46 hypothetical protein phrog_7722 unknown function unknown function 1 26901 27125
YP_009148185.1 NC_027345_p5 hypothetical protein phrog_7875 unknown function unknown function 1 1563 1814
YP_009148267.1 NC_027345_p87 hypothetical protein phrog_8800 unknown function unknown function 1 70444 70656
YP_009148233.1 NC_027345_p53 hypothetical protein phrog_7697 tail fiber protein tail -1 29959 33168
YP_009148188.1 NC_027345_p8 hypothetical protein phrog_8477 unknown function unknown function 1 2410 2613
YP_009148222.1 NC_027345_p42 hypothetical protein phrog_8620 unknown function unknown function 1 21957 22355
YP_009148256.1 NC_027345_p76 hypothetical protein phrog_2130 unknown function unknown function -1 60309 60974
YP_009148239.1 NC_027345_p59 hypothetical protein phrog_2139 exonuclease DNA, RNA and nucleotide metabolism 1 36648 37658
YP_009148238.1 NC_027345_p58 hypothetical protein phrog_2452 unknown function unknown function 1 36377 36646
YP_009148192.1 NC_027345_p12 hypothetical protein phrog_8570 unknown function unknown function 1 3372 3557
YP_009148262.1 NC_027345_p82 hypothetical protein phrog_8880 unknown function unknown function 1 66507 66806
YP_009148251.1 NC_027345_p71 hypothetical protein phrog_2206 virion RNA polymerase DNA, RNA and nucleotide metabolism -1 44851 55047
YP_009148223.1 NC_027345_p43 hypothetical protein phrog_10495 HNH endonuclease DNA, RNA and nucleotide metabolism 1 22352 22543
YP_009148255.1 NC_027345_p75 hypothetical protein phrog_2050 virion structural protein head and packaging -1 59340 60305
YP_009148252.1 NC_027345_p72 hypothetical protein phrog_6467 unknown function unknown function -1 55048 56613
YP_009148261.1 NC_027345_p81 deoxyuridine 5'-triphosphate nucleotidohydrolase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 66084 66503
YP_009148237.1 NC_027345_p57 hypothetical protein phrog_3360 unknown function unknown function 1 35853 36281
YP_009148257.1 NC_027345_p77 hypothetical protein phrog_1357 major head protein head and packaging -1 61031 62230
YP_009148187.1 NC_027345_p7 hypothetical protein phrog_8449 unknown function unknown function 1 2110 2406
YP_009148263.1 NC_027345_p83 hypothetical protein phrog_2125 virion structural protein head and packaging -1 66838 67572
YP_009148217.1 NC_027345_p37 hypothetical protein phrog_7095 unknown function unknown function 1 17989 18516
YP_009148243.1 NC_027345_p63 hypothetical protein phrog_6026 unknown function unknown function 1 41401 41766
YP_009148246.1 NC_027345_p66 hypothetical protein phrog_7564 unknown function unknown function 1 42766 43203
YP_009148241.1 NC_027345_p61 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 39890 40624
YP_009148230.1 NC_027345_p50 hypothetical protein phrog_312 Rz-like spanin lysis -1 28380 28892
YP_009148211.1 NC_027345_p31 hypothetical protein phrog_8112 unknown function unknown function 1 12587 12772
YP_009148210.1 NC_027345_p30 hypothetical protein phrog_12464 unknown function unknown function 1 12119 12343
YP_009148231.1 NC_027345_p51 hypothetical protein phrog_3108 unknown function unknown function -1 28889 29413
YP_009148240.1 NC_027345_p60 DNA primase P4 type phrog_2135 DNA primase DNA, RNA and nucleotide metabolism 1 37673 39841
YP_009148218.1 NC_027345_p38 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 18516 21131
YP_009148215.1 NC_027345_p35 hypothetical protein phrog_1314 HNH endonuclease DNA, RNA and nucleotide metabolism 1 15504 16733
YP_009148248.1 NC_027345_p68 hypothetical protein phrog_8394 unknown function unknown function 1 44072 44308
YP_009148193.1 NC_027345_p13 hypothetical protein phrog_6271 toxin moron, auxiliary metabolic gene and host takeover 1 3649 3939
YP_009148268.1 NC_027345_p88 hypothetical protein phrog_10651 unknown function unknown function 1 70653 70913
YP_009148229.1 NC_027345_p49 hypothetical protein phrog_8796 unknown function unknown function 1 27760 28317
YP_009148247.1 NC_027345_p67 hypothetical protein phrog_7212 unknown function unknown function 1 43261 43665
YP_009148205.1 NC_027345_p25 hypothetical protein phrog_6140 unknown function unknown function 1 9618 9842
YP_009148190.1 NC_027345_p10 hypothetical protein phrog_8334 unknown function unknown function 1 2848 3081
YP_009148208.1 NC_027345_p28 hypothetical protein phrog_8451 unknown function unknown function 1 11023 11604
YP_009148181.1 NC_027345_p1 hypothetical protein phrog_6483 unknown function unknown function 1 200 454
YP_009148227.1 NC_027345_p47 hypothetical protein phrog_6854 holin lysis 1 27209 27526
YP_009148189.1 NC_027345_p9 hypothetical protein phrog_8885 unknown function unknown function 1 2633 2851
YP_009148253.1 NC_027345_p73 hypothetical protein phrog_2646 unknown function unknown function -1 56613 57080
YP_009148194.1 NC_027345_p14 hypothetical protein phrog_8775 unknown function unknown function 1 4124 4417
YP_009148199.1 NC_027345_p19 RNA polymerase phrog_2166 N4-like RNA polymerase DNA, RNA and nucleotide metabolism 1 5904 6836
YP_009148182.1 NC_027345_p2 hypothetical protein phrog_7624 unknown function unknown function 1 872 1063
YP_009148264.1 NC_027345_p84 hypothetical protein phrog_38 terminase large subunit head and packaging -1 67569 69221
YP_009148271.1 NC_027345_p91 hypothetical protein phrog_6483 unknown function unknown function 1 72545 72799
YP_009148259.1 NC_027345_p79 hypothetical protein phrog_2346 unknown function unknown function -1 63461 63799
YP_009148250.1 NC_027345_p70 hypothetical protein phrog_8152 unknown function unknown function 1 44632 44835
YP_009148224.1 NC_027345_p44 rIIA lysis inhibitor phrog_2979 RIIA lysis inhibitor lysis 1 22547 25063
YP_009148216.1 NC_027345_p36 RecD-like DNA helicase YrrC phrog_325 Dda-like helicase DNA, RNA and nucleotide metabolism 1 16823 17989
YP_009148184.1 NC_027345_p4 hypothetical protein phrog_3968 unknown function unknown function 1 1321 1563
YP_009148206.1 NC_027345_p26 hypothetical protein phrog_7111 unknown function unknown function 1 9846 10472
YP_009148201.1 NC_027345_p21 hypothetical protein phrog_8144 unknown function unknown function 1 7400 7714
YP_009148270.1 NC_027345_p90 hypothetical protein phrog_8657 unknown function unknown function 1 71418 72080
YP_009148254.1 NC_027345_p74 hypothetical protein phrog_2220 unknown function unknown function -1 57061 59283
YP_009148244.1 NC_027345_p64 hypothetical protein phrog_3934 unknown function unknown function 1 41763 42206
YP_009148200.1 NC_027345_p20 hypothetical protein phrog_8597 unknown function unknown function 1 6849 7109
YP_009148202.1 NC_027345_p22 hypothetical protein phrog_8144 unknown function unknown function 1 7747 8019
YP_009148269.1 NC_027345_p89 hypothetical protein phrog_9146 unknown function unknown function 1 70904 71212
YP_009148183.1 NC_027345_p3 hypothetical protein phrog_3968 unknown function unknown function 1 1082 1324
YP_009148220.1 NC_027345_p40 dCMP deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism 1 21312 21782
YP_009148191.1 NC_027345_p11 hypothetical protein phrog_8895 unknown function unknown function 1 3078 3299
YP_009148203.1 NC_027345_p23 hypothetical protein phrog_2051 RNA polymerase DNA, RNA and nucleotide metabolism 1 8054 9295
YP_009148213.1 NC_027345_p33 hypothetical protein phrog_4781 unknown function unknown function 1 13630 13872
YP_009148265.1 NC_027345_p85 hypothetical protein phrog_2109 unknown function unknown function -1 69218 69946
YP_009148204.1 NC_027345_p24 hypothetical protein phrog_8738 unknown function unknown function 1 9393 9545
YP_009148195.1 NC_027345_p15 hypothetical protein phrog_2072 unknown function unknown function 1 4417 4818
YP_009148225.1 NC_027345_p45 hypothetical protein phrog_2886 RIIB lysis inhibitor lysis 1 25075 26853
YP_009148207.1 NC_027345_p27 hypothetical protein phrog_8613 unknown function unknown function 1 10469 11023
YP_009148235.1 NC_027345_p55 hypothetical protein phrog_4047 unknown function unknown function -1 33875 34174
YP_009148245.1 NC_027345_p65 hypothetical protein phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 42194 42754
YP_009148221.1 NC_027345_p41 hypothetical protein phrog_10189 unknown function unknown function 1 21814 21954
YP_009148214.1 NC_027345_p34 ATP/GTP binding protein phrog_1297 ATPase other 1 13904 14974
YP_009148234.1 NC_027345_p54 hypothetical protein phrog_3370 unknown function unknown function -1 33207 33878
YP_009148242.1 NC_027345_p62 hypothetical protein phrog_743 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 40651 41397
YP_009148236.1 NC_027345_p56 tail fiber protein phrog_496 tail fiber protein tail -1 34171 35484
YP_009148212.1 NC_027345_p32 ATP-dependent Clp protease ATP-binding subunit ClpX phrog_5534 unknown function unknown function 1 12800 13633
YP_009148232.1 NC_027345_p52 hypothetical protein phrog_2687 unknown function unknown function -1 29410 29652
YP_009148209.1 NC_027345_p29 hypothetical protein phrog_8374 unknown function unknown function 1 11604 12122
YP_009148258.1 NC_027345_p78 hypothetical protein phrog_2120 tail length tape measure protein tail -1 62265 63461
YP_009148266.1 NC_027345_p86 hypothetical protein phrog_9047 unknown function unknown function 1 70013 70444
YP_009148228.1 NC_027345_p48 hypothetical protein phrog_8307 unknown function unknown function 1 27576 27767
YP_009148196.1 NC_027345_p16 hypothetical protein phrog_7756 unknown function unknown function 1 4818 5069
YP_009148197.1 NC_027345_p17 hypothetical protein phrog_335 phosphatase other 1 5069 5509
YP_009148260.1 NC_027345_p80 hypothetical protein phrog_1216 portal protein head and packaging -1 63869 66049