| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_027346 |
Definition |
Propionibacterium phage PHL171M01, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus. |
DB of origin |
REFSEQ |
Length |
29327 |
Host Name |
Propionibacterium acnes |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
45 |
%GC |
53.71 |
Number of singletons |
2 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009148272.1 | NC_027346_p1 | excinuclease | phrog_1897 | terminase small subunit | head and packaging | 1 | 1 | 372 |
| YP_009148285.1 | NC_027346_p14 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 8518 | 11283 |
| YP_009148315.1 | NC_027346_p44 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28781 | 28864 |
| YP_009148273.1 | NC_027346_p2 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 372 | 1883 |
| YP_009148300.1 | NC_027346_p29 | hypothetical protein | phrog_1881 | unknown function | unknown function | -1 | 20074 | 20640 |
| YP_009148316.1 | NC_027346_p45 | endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 28978 | 29280 |
| YP_009148280.1 | NC_027346_p9 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 6449 | 6739 |
| YP_009148296.1 | NC_027346_p25 | hypothetical protein | phrog_1340 | unknown function | unknown function | -1 | 17965 | 18285 |
| YP_009148313.1 | NC_027346_p42 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26590 | 26898 |
| YP_009148281.1 | NC_027346_p10 | hypothetical protein | phrog_1892 | minor tail protein | tail | 1 | 6736 | 7107 |
| YP_009148277.1 | NC_027346_p6 | major head protein | phrog_10 | major head protein | head and packaging | 1 | 4640 | 5587 |
| YP_009148284.1 | NC_027346_p13 | hypothetical protein | phrog_3166 | unknown function | unknown function | 1 | 8223 | 8510 |
| YP_009148304.1 | NC_027346_p33 | DNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 21910 | 22773 |
| YP_009148287.1 | NC_027346_p16 | protease | phrog_110 | minor tail protein | tail | 1 | 12305 | 13411 |
| YP_009148306.1 | NC_027346_p35 | hypothetical protein | phrog_1890 | unknown function | unknown function | -1 | 23316 | 23726 |
| YP_009148283.1 | NC_027346_p12 | hypothetical protein | phrog_1927 | tail assembly chaperone | tail | 1 | 7828 | 8124 |
| YP_009148312.1 | NC_027346_p41 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26240 | 26554 |
| YP_009148311.1 | NC_027346_p40 | hypothetical protein | phrog_1908 | unknown function | unknown function | -1 | 25586 | 26170 |
| YP_009148308.1 | NC_027346_p37 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 24670 | 25029 |
| YP_009148276.1 | NC_027346_p5 | scaffold protein | phrog_1879 | head scaffolding protein | head and packaging | 1 | 4076 | 4633 |
| YP_009148278.1 | NC_027346_p7 | hypothetical protein | phrog_1290 | head-tail adaptor | connector | 1 | 5632 | 6093 |
| YP_009148274.1 | NC_027346_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 1880 | 3205 |
| YP_009148279.1 | NC_027346_p8 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 6095 | 6442 |
| YP_009148314.1 | NC_027346_p43 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28505 | 28609 |
| YP_009148289.1 | NC_027346_p18 | hypothetical protein | phrog_1958 | minor tail protein | tail | 1 | 14291 | 14557 |
| YP_009148275.1 | NC_027346_p4 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 3212 | 3967 |
| YP_009148293.1 | NC_027346_p22 | hypothetical protein | phrog_2092 | unknown function | unknown function | -1 | 16778 | 17272 |
| YP_009148302.1 | NC_027346_p31 | DNA primase | phrog_2304 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 21193 | 21594 |
| YP_009148298.1 | NC_027346_p27 | hypothetical protein | phrog_1923 | unknown function | unknown function | -1 | 19336 | 19536 |
| YP_009148305.1 | NC_027346_p34 | hypothetical protein | phrog_1288 | unknown function | unknown function | -1 | 22815 | 23276 |
| YP_009148303.1 | NC_027346_p32 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 21554 | 21913 |
| YP_009148309.1 | NC_027346_p38 | hypothetical protein | phrog_1937 | unknown function | unknown function | -1 | 25135 | 25338 |
| YP_009148295.1 | NC_027346_p24 | hypothetical protein | phrog_1947 | unknown function | unknown function | -1 | 17670 | 17948 |
| YP_009148290.1 | NC_027346_p19 | collagen-like protein | phrog_1806 | collagen like minor tail | tail | 1 | 14560 | 15375 |
| YP_009148294.1 | NC_027346_p23 | sigma factor | phrog_1729 | unknown function | unknown function | -1 | 17277 | 17666 |
| YP_009148291.1 | NC_027346_p20 | endolysin | phrog_670 | endolysin | lysis | 1 | 15425 | 16282 |
| YP_009148286.1 | NC_027346_p15 | minor tail subunit | phrog_106 | minor tail protein | tail | 1 | 11350 | 12246 |
| YP_009148310.1 | NC_027346_p39 | hypothetical protein | phrog_1884 | unknown function | unknown function | -1 | 25335 | 25562 |
| YP_009148301.1 | NC_027346_p30 | DNA primase | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20685 | 21356 |
| YP_009148288.1 | NC_027346_p17 | hypothetical protein | phrog_1910 | lectin | other | 1 | 13431 | 14249 |
| YP_009148292.1 | NC_027346_p21 | holin | phrog_443 | holin | lysis | 1 | 16295 | 16696 |
| YP_009148297.1 | NC_027346_p26 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18296 | 19339 |
| YP_009148282.1 | NC_027346_p11 | major tail protein | phrog_117 | major tail protein | tail | 1 | 7168 | 7800 |
| YP_009148307.1 | NC_027346_p36 | exonuclease | phrog_1870 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 23723 | 24670 |
| YP_009148299.1 | NC_027346_p28 | hypothetical protein | phrog_2548 | unknown function | unknown function | -1 | 19520 | 20077 |