| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_027350 |
Definition |
Citrobacter phage Stevie, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Drexlerviridae; Tempevirinae; Tlsvirus. |
DB of origin |
REFSEQ |
Length |
49816 |
Host Name |
Citrobacter freundii |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
90 |
%GC |
42.83 |
Number of singletons |
4 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009148778.1 | NC_027350_p72 | hypothetical protein | phrog_14011 | unknown function | unknown function | 1 | 44669 | 44857 |
| YP_009148764.1 | NC_027350_p58 | hypothetical protein | phrog_4841 | unknown function | unknown function | 1 | 41064 | 41516 |
| YP_009148725.1 | NC_027350_p19 | minor tail protein | phrog_18 | minor tail protein | tail | 1 | 14136 | 14894 |
| YP_009148771.1 | NC_027350_p65 | hypothetical protein | phrog_13854 | unknown function | unknown function | 1 | 42602 | 42859 |
| YP_009148765.1 | NC_027350_p59 | hypothetical protein | phrog_18849 | unknown function | unknown function | 1 | 41519 | 41752 |
| YP_009148792.1 | NC_027350_p86 | hypothetical protein | phrog_303 | unknown function | unknown function | 1 | 48650 | 48877 |
| YP_009148744.1 | NC_027350_p38 | pinholin | phrog_2877 | holin | lysis | 1 | 32612 | 32836 |
| YP_009148793.1 | NC_027350_p87 | hypothetical protein | phrog_30084 | unknown function | unknown function | 1 | 49060 | 49269 |
| YP_009148730.1 | NC_027350_p24 | hypothetical protein | phrog_11265 | tail length tape measure protein | tail | 1 | 21655 | 21945 |
| YP_009148794.1 | NC_027350_p88 | hypothetical protein | phrog_6666 | unknown function | unknown function | 1 | 49259 | 49420 |
| YP_009148751.1 | NC_027350_p45 | hypothetical protein | phrog_12725 | unknown function | unknown function | -1 | 36192 | 36440 |
| YP_009148783.1 | NC_027350_p77 | hypothetical protein | phrog_9122 | unknown function | unknown function | 1 | 46258 | 46455 |
| YP_009148755.1 | NC_027350_p49 | hypothetical protein | phrog_4344 | unknown function | unknown function | -1 | 37993 | 38214 |
| YP_009148712.1 | NC_027350_p6 | hypothetical protein | phrog_1989 | unknown function | unknown function | 1 | 5396 | 5875 |
| YP_009148741.1 | NC_027350_p35 | hypothetical protein | phrog_2180 | unknown function | unknown function | 1 | 30913 | 31077 |
| YP_009148721.1 | NC_027350_p15 | tape measure chaperone | phrog_17368 | tail length tape measure protein | tail | 1 | 10144 | 10775 |
| YP_009148788.1 | NC_027350_p82 | hypothetical protein | phrog_6031 | unknown function | unknown function | 1 | 47623 | 47832 |
| YP_009148766.1 | NC_027350_p60 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41752 | 41865 |
| YP_009148720.1 | NC_027350_p14 | major tail protein | phrog_584 | major tail protein | tail | 1 | 9404 | 10066 |
| YP_009148719.1 | NC_027350_p13 | tail protein | phrog_179 | tail terminator | connector | 1 | 9000 | 9389 |
| YP_009148763.1 | NC_027350_p57 | hypothetical protein | phrog_21159 | unknown function | unknown function | -1 | 39847 | 40281 |
| YP_009148734.1 | NC_027350_p28 | DNA primase | phrog_510 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 25451 | 26377 |
| YP_009148786.1 | NC_027350_p80 | hypothetical protein | phrog_8758 | unknown function | unknown function | 1 | 46793 | 47038 |
| YP_009148709.1 | NC_027350_p3 | portal protein | phrog_146 | portal protein | head and packaging | 1 | 2249 | 3544 |
| YP_009148736.1 | NC_027350_p30 | helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 27134 | 29107 |
| YP_009148731.1 | NC_027350_p25 | single-strand annealing protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 21993 | 22655 |
| YP_009148750.1 | NC_027350_p44 | hypothetical protein | phrog_2373 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 34544 | 36124 |
| YP_009148785.1 | NC_027350_p79 | hypothetical protein | phrog_14912 | unknown function | unknown function | 1 | 46614 | 46796 |
| YP_009148710.1 | NC_027350_p4 | prohead protease | phrog_324 | head morphogenesis | head and packaging | 1 | 3537 | 4277 |
| YP_009148761.1 | NC_027350_p55 | hypothetical protein | phrog_14152 | unknown function | unknown function | -1 | 39320 | 39556 |
| YP_009148790.1 | NC_027350_p84 | hypothetical protein | phrog_11192 | unknown function | unknown function | 1 | 48134 | 48460 |
| YP_009148724.1 | NC_027350_p18 | minor tail protein | phrog_14 | minor tail protein | tail | 1 | 13722 | 14069 |
| YP_009148757.1 | NC_027350_p51 | hypothetical protein | phrog_5016 | unknown function | unknown function | -1 | 38437 | 38670 |
| YP_009148748.1 | NC_027350_p42 | hypothetical protein | phrog_9539 | unknown function | unknown function | -1 | 34028 | 34225 |
| YP_009148769.1 | NC_027350_p63 | hypothetical protein | phrog_4653 | unknown function | unknown function | 1 | 42173 | 42331 |
| YP_009148776.1 | NC_027350_p70 | hypothetical protein | phrog_17726 | unknown function | unknown function | 1 | 44014 | 44121 |
| YP_009148758.1 | NC_027350_p52 | hypothetical protein | phrog_6147 | unknown function | unknown function | -1 | 38670 | 38951 |
| YP_009148728.1 | NC_027350_p22 | tail fiber protein | phrog_31 | central tail fiber J | tail | 1 | 16287 | 20063 |
| YP_009148760.1 | NC_027350_p54 | hypothetical protein | phrog_6503 | unknown function | unknown function | -1 | 39129 | 39323 |
| YP_009148770.1 | NC_027350_p64 | hypothetical protein | phrog_1972 | unknown function | unknown function | 1 | 42315 | 42596 |
| YP_009148774.1 | NC_027350_p68 | hypothetical protein | singleton | unknown function | unknown function | 1 | 43208 | 43564 |
| YP_009148780.1 | NC_027350_p74 | hypothetical protein | phrog_22783 | unknown function | unknown function | 1 | 45131 | 45427 |
| YP_009148772.1 | NC_027350_p66 | hypothetical protein | phrog_6763 | activator of host PrrC lysyl-tRNA endonuclease | moron, auxiliary metabolic gene and host takeover | 1 | 42869 | 42949 |
| YP_009148745.1 | NC_027350_p39 | SAR endolysin | phrog_7 | endolysin | lysis | 1 | 32836 | 33330 |
| YP_009148789.1 | NC_027350_p83 | hypothetical protein | phrog_11097 | unknown function | unknown function | 1 | 47829 | 48131 |
| YP_009148739.1 | NC_027350_p33 | DNA N-6-adenine methyltransferase | phrog_111 | DNA methyltransferase | other | 1 | 29869 | 30609 |
| YP_009148787.1 | NC_027350_p81 | hypothetical protein | phrog_13504 | unknown function | unknown function | 1 | 47051 | 47548 |
| YP_009148754.1 | NC_027350_p48 | hypothetical protein | phrog_9323 | unknown function | unknown function | -1 | 37767 | 37991 |
| YP_009148722.1 | NC_027350_p16 | tape measure chaperone protein | phrog_569 | tail length tape measure protein | tail | 1 | 10144 | 10458 |
| YP_009148784.1 | NC_027350_p78 | hypothetical protein | phrog_20227 | unknown function | unknown function | 1 | 46457 | 46621 |
| YP_009148759.1 | NC_027350_p53 | hypothetical protein | phrog_32259 | unknown function | unknown function | -1 | 39028 | 39129 |
| YP_009148717.1 | NC_027350_p11 | hypothetical protein | phrog_161 | head closure Hc1 | connector | 1 | 8206 | 8577 |
| YP_009148781.1 | NC_027350_p75 | hypothetical protein | phrog_16293 | unknown function | unknown function | 1 | 45427 | 45609 |
| YP_009148782.1 | NC_027350_p76 | hypothetical protein | phrog_139 | deoxynucleoside monophosphate kinase | other | 1 | 45602 | 46177 |
| YP_009148752.1 | NC_027350_p46 | hypothetical protein | phrog_2684 | unknown function | unknown function | -1 | 36437 | 36799 |
| YP_009148733.1 | NC_027350_p27 | tail fiber protein | phrog_5481 | tail fiber protein | tail | -1 | 23151 | 25295 |
| YP_009148714.1 | NC_027350_p8 | major capsid protein | phrog_264 | major head protein | head and packaging | 1 | 6449 | 7423 |
| YP_009148727.1 | NC_027350_p21 | tail assembly protein | phrog_32 | tail assembly protein | tail | 1 | 15606 | 16205 |
| YP_009148795.1 | NC_027350_p89 | hypothetical protein | phrog_2919 | unknown function | unknown function | 1 | 49404 | 49586 |
| YP_009148735.1 | NC_027350_p29 | transcriptional regulator | phrog_2856 | transcriptional regulator | transcription regulation | -1 | 26437 | 27045 |
| YP_009148742.1 | NC_027350_p36 | hypothetical protein | phrog_2817 | unknown function | unknown function | 1 | 31058 | 31300 |
| YP_009148756.1 | NC_027350_p50 | hypothetical protein | phrog_16768 | unknown function | unknown function | -1 | 38273 | 38440 |
| YP_009148746.1 | NC_027350_p40 | unimolecular spanin | phrog_1804 | Rz-like spanin | lysis | 1 | 33327 | 33716 |
| YP_009148740.1 | NC_027350_p34 | hypothetical protein | phrog_2676 | unknown function | unknown function | 1 | 30611 | 30841 |
| YP_009148737.1 | NC_027350_p31 | endonuclease | phrog_824 | unknown function | unknown function | 1 | 29110 | 29517 |
| YP_009148715.1 | NC_027350_p9 | hypothetical protein | phrog_2716 | unknown function | unknown function | 1 | 7484 | 7756 |
| YP_009148718.1 | NC_027350_p12 | hypothetical protein | phrog_169 | tail completion or Neck1 protein | connector | 1 | 8570 | 9010 |
| YP_009148711.1 | NC_027350_p5 | major head subunit precursor | phrog_530 | head maturation protease | head and packaging | 1 | 4274 | 5383 |
| YP_009148732.1 | NC_027350_p26 | single-strand DNA-binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 22693 | 23118 |
| YP_009148723.1 | NC_027350_p17 | tape measure protein | phrog_24 | tail length tape measure protein | tail | 1 | 10813 | 13722 |
| YP_009148713.1 | NC_027350_p7 | hypothetical protein | phrog_1989 | unknown function | unknown function | 1 | 5919 | 6359 |
| YP_009148707.1 | NC_027350_p1 | terminase small subunit | phrog_606 | terminase small subunit | head and packaging | 1 | 88 | 612 |
| YP_009148767.1 | NC_027350_p61 | hypothetical protein | phrog_22353 | unknown function | unknown function | 1 | 41862 | 41969 |
| YP_009148773.1 | NC_027350_p67 | hypothetical protein | singleton | unknown function | unknown function | 1 | 43011 | 43193 |
| YP_009148791.1 | NC_027350_p85 | hypothetical protein | phrog_1312 | unknown function | unknown function | 1 | 48520 | 48648 |
| YP_009148747.1 | NC_027350_p41 | hypothetical protein | phrog_10679 | unknown function | unknown function | -1 | 33730 | 33951 |
| YP_009148775.1 | NC_027350_p69 | hypothetical protein | phrog_8382 | unknown function | unknown function | 1 | 43624 | 43941 |
| YP_009148762.1 | NC_027350_p56 | hypothetical protein | phrog_7421 | unknown function | unknown function | -1 | 39553 | 39771 |
| YP_009148768.1 | NC_027350_p62 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41962 | 42075 |
| YP_009148729.1 | NC_027350_p23 | exodeoxyribonuclease | phrog_412 | exonuclease VIII | DNA, RNA and nucleotide metabolism | 1 | 20524 | 21579 |
| YP_009148779.1 | NC_027350_p73 | hypothetical protein | phrog_9755 | unknown function | unknown function | 1 | 44868 | 45053 |
| YP_009148753.1 | NC_027350_p47 | hypothetical protein | phrog_757 | DNA methyltransferase | other | -1 | 36872 | 37567 |
| YP_009148716.1 | NC_027350_p10 | hypothetical protein | phrog_302 | virion structural protein | head and packaging | 1 | 7805 | 8209 |
| YP_009148749.1 | NC_027350_p43 | hypothetical protein | phrog_2794 | unknown function | unknown function | -1 | 34149 | 34541 |
| YP_009148796.1 | NC_027350_p90 | hypothetical protein | phrog_5976 | unknown function | unknown function | 1 | 49586 | 49816 |
| YP_009148708.1 | NC_027350_p2 | terminase large subunit | phrog_38 | terminase large subunit | head and packaging | 1 | 624 | 2195 |
| YP_009148743.1 | NC_027350_p37 | phosphoesterase | phrog_704 | DNA repair exonuclease | DNA, RNA and nucleotide metabolism | 1 | 31385 | 32500 |
| YP_009148726.1 | NC_027350_p20 | tail assembly protein | phrog_30 | minor tail protein | tail | 1 | 14891 | 15613 |
| YP_009148738.1 | NC_027350_p32 | hypothetical protein | phrog_7420 | unknown function | unknown function | 1 | 29466 | 29867 |
| YP_009148777.1 | NC_027350_p71 | polynucleotide kinase | phrog_415 | polynucleotide kinase | other | 1 | 44125 | 44688 |