| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_027354 |
Definition |
Propionibacterium phage PHL301M00, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus. |
DB of origin |
REFSEQ |
Length |
29323 |
Host Name |
Propionibacterium acnes |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
45 |
%GC |
54.4 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009149547.1 | NC_027354_p31 | DNA primase | phrog_2304 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 21124 | 21525 |
| YP_009149561.1 | NC_027354_p45 | endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 28970 | 29272 |
| YP_009149525.1 | NC_027354_p9 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 6434 | 6724 |
| YP_009149523.1 | NC_027354_p7 | hypothetical protein | phrog_1290 | head-tail adaptor | connector | 1 | 5617 | 6078 |
| YP_009149542.1 | NC_027354_p26 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18234 | 19274 |
| YP_009149558.1 | NC_027354_p42 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26504 | 26812 |
| YP_009149520.1 | NC_027354_p4 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 3210 | 3965 |
| YP_009149560.1 | NC_027354_p44 | hypothetical protein | phrog_13647 | unknown function | unknown function | 1 | 28771 | 28872 |
| YP_009149524.1 | NC_027354_p8 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 6080 | 6427 |
| YP_009149540.1 | NC_027354_p24 | hypothetical protein | phrog_1947 | unknown function | unknown function | -1 | 17614 | 17889 |
| YP_009149534.1 | NC_027354_p18 | hypothetical protein | phrog_1958 | minor tail protein | tail | 1 | 14268 | 14528 |
| YP_009149554.1 | NC_027354_p38 | hypothetical protein | phrog_1937 | unknown function | unknown function | -1 | 25059 | 25262 |
| YP_009149538.1 | NC_027354_p22 | hypothetical protein | phrog_2092 | unknown function | unknown function | -1 | 16736 | 17224 |
| YP_009149546.1 | NC_027354_p30 | DNA primase | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20616 | 21287 |
| YP_009149533.1 | NC_027354_p17 | hypothetical protein | phrog_1910 | lectin | other | 1 | 13396 | 14226 |
| YP_009149531.1 | NC_027354_p15 | minor tail subunit | phrog_106 | minor tail protein | tail | 1 | 11256 | 12224 |
| YP_009149550.1 | NC_027354_p34 | hypothetical protein | phrog_1288 | unknown function | unknown function | -1 | 22751 | 23209 |
| YP_009149551.1 | NC_027354_p35 | hypothetical protein | phrog_1890 | unknown function | unknown function | -1 | 23260 | 23667 |
| YP_009149537.1 | NC_027354_p21 | holin | phrog_443 | holin | lysis | 1 | 16246 | 16650 |
| YP_009149555.1 | NC_027354_p39 | hypothetical protein | phrog_1884 | unknown function | unknown function | -1 | 25259 | 25486 |
| YP_009149521.1 | NC_027354_p5 | scaffold protein | phrog_1879 | head scaffolding protein | head and packaging | 1 | 4068 | 4619 |
| YP_009149518.1 | NC_027354_p2 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 373 | 1884 |
| YP_009149553.1 | NC_027354_p37 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 24605 | 24958 |
| YP_009149532.1 | NC_027354_p16 | protease | phrog_110 | minor tail protein | tail | 1 | 12282 | 13388 |
| YP_009149556.1 | NC_027354_p40 | hypothetical protein | phrog_1908 | unknown function | unknown function | -1 | 25503 | 26036 |
| YP_009149552.1 | NC_027354_p36 | exonuclease | phrog_1870 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 23664 | 24605 |
| YP_009149541.1 | NC_027354_p25 | hypothetical protein | phrog_1340 | unknown function | unknown function | -1 | 17904 | 18224 |
| YP_009149522.1 | NC_027354_p6 | major head protein | phrog_10 | major head protein | head and packaging | 1 | 4626 | 5573 |
| YP_009149545.1 | NC_027354_p29 | hypothetical protein | phrog_1881 | unknown function | unknown function | -1 | 20009 | 20572 |
| YP_009149530.1 | NC_027354_p14 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 8494 | 11259 |
| YP_009149536.1 | NC_027354_p20 | endolysin | phrog_670 | endolysin | lysis | 1 | 15349 | 16239 |
| YP_009149539.1 | NC_027354_p23 | sigma factor | phrog_1729 | unknown function | unknown function | -1 | 17230 | 17610 |
| YP_009149527.1 | NC_027354_p11 | major tail protein | phrog_117 | major tail protein | tail | 1 | 7132 | 7776 |
| YP_009149519.1 | NC_027354_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 1881 | 3206 |
| YP_009149559.1 | NC_027354_p43 | hypothetical protein | phrog_33787 | unknown function | unknown function | 1 | 28450 | 28590 |
| YP_009149528.1 | NC_027354_p12 | hypothetical protein | phrog_1927 | tail assembly chaperone | tail | 1 | 7804 | 8100 |
| YP_009149549.1 | NC_027354_p33 | DNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 21847 | 22710 |
| YP_009149526.1 | NC_027354_p10 | hypothetical protein | phrog_1892 | minor tail protein | tail | 1 | 6721 | 7092 |
| YP_009149529.1 | NC_027354_p13 | hypothetical protein | phrog_3166 | unknown function | unknown function | 1 | 8199 | 8486 |
| YP_009149557.1 | NC_027354_p41 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26157 | 26471 |
| YP_009149544.1 | NC_027354_p28 | hypothetical protein | phrog_2548 | unknown function | unknown function | -1 | 19446 | 20012 |
| YP_009149535.1 | NC_027354_p19 | collagen-like protein | phrog_1806 | collagen like minor tail | tail | 1 | 14528 | 15334 |
| YP_009149543.1 | NC_027354_p27 | hypothetical protein | phrog_1923 | unknown function | unknown function | -1 | 19271 | 19462 |
| YP_009149548.1 | NC_027354_p32 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 21485 | 21841 |
| YP_009149517.1 | NC_027354_p1 | excinuclease | phrog_1897 | terminase small subunit | head and packaging | 1 | 125 | 373 |