Genomic map of Escherichia virus DT57C (NC_027356)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_027356
Definition
Enterobacteria phage DT57C, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Markadamsvirinae; Tequintavirus.
DB of origin
REFSEQ
Length
108065
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
133
%GC
39.65
Number of singletons
1
Number of paralogs
3

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009149791.1 NC_027356_p10 hypothetical protein phrog_4227 endonuclease nicking abasic sites generated by host uracil glycosylase Ung moron, auxiliary metabolic gene and host takeover 1 6148 6360
YP_009149783.1 NC_027356_p2 hypothetical protein phrog_4576 unknown function unknown function -1 933 1334
YP_009149884.1 NC_027356_p103 exonuclease SbcCD C subunit phrog_77 SbcC-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism 1 65683 67521
YP_009149815.1 NC_027356_p34 hypothetical protein phrog_5944 unknown function unknown function -1 17528 17944
YP_009149823.1 NC_027356_p42 hypothetical protein phrog_5468 unknown function unknown function -1 22172 22516
YP_009149800.1 NC_027356_p19 hypothetical protein phrog_4605 unknown function unknown function -1 11435 11881
YP_009149787.1 NC_027356_p6 hypothetical protein phrog_3747 unknown function unknown function -1 3938 4189
YP_009149789.1 NC_027356_p8 repeat completion protein singleton unknown function unknown function -1 5237 5431
YP_009149889.1 NC_027356_p108 L-shaped tail fiber assembly phrog_10305 tail fiber protein tail -1 72188 75418
YP_009149886.1 NC_027356_p105 flap endonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 68007 68882
YP_009149851.1 NC_027356_p70 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism -1 37103 37942
YP_009149803.1 NC_027356_p22 hypothetical protein phrog_4215 unknown function unknown function -1 12462 12923
YP_009149888.1 NC_027356_p107 L-shaped tail fiber assembly phrog_6921 tail fiber protein tail -1 69783 72149
YP_009149902.1 NC_027356_p121 major head protein phrog_10 major head protein head and packaging -1 90239 91615
YP_009149820.1 NC_027356_p39 hypothetical protein phrog_812 Rz-like spanin lysis -1 20613 20966
YP_009149830.1 NC_027356_p49 autonomous glycyl radical cofactor GrcA phrog_1209 unknown function unknown function -1 24577 24945
YP_009149901.1 NC_027356_p120 head completion protein phrog_442 head-tail adaptor connector -1 89663 90175
YP_009149785.1 NC_027356_p4 hypothetical protein phrog_4820 membrane protein moron, auxiliary metabolic gene and host takeover -1 3166 3363
YP_009149834.1 NC_027356_p53 hypothetical protein phrog_3972 unknown function unknown function -1 27549 27896
YP_009149844.1 NC_027356_p63 hypothetical protein phrog_1491 tail fiber protein tail -1 33566 34204
YP_009149840.1 NC_027356_p59 hypothetical protein phrog_1460 tRNA amidotransferase DNA, RNA and nucleotide metabolism -1 31678 32112
YP_009149812.1 NC_027356_p31 hypothetical protein phrog_7354 major head protein head and packaging -1 16395 16640
YP_009149904.1 NC_027356_p123 decorating protein phrog_2973 Hoc-like head decoration head and packaging -1 92269 93006
YP_009149850.1 NC_027356_p69 RNase H1 phrog_531 Rnase H DNA, RNA and nucleotide metabolism -1 36495 36971
YP_009149877.1 NC_027356_p96 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 58058 58948
YP_009149885.1 NC_027356_p104 D14 protein/ resolvase phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 67525 68007
YP_009149913.1 NC_027356_p132 hypothetical protein phrog_5851 unknown function unknown function 1 99506 99700
YP_009149880.1 NC_027356_p99 helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 62065 63417
YP_009149898.1 NC_027356_p117 tail tube protein phrog_3575 major tail protein tail -1 86974 88380
YP_009149875.1 NC_027356_p94 D5 protein/DNA-binding protein phrog_323 transcriptional regulator, D5-like transcription regulation 1 55739 56506
YP_009149792.1 NC_027356_p11 hypothetical protein phrog_4379 unknown function unknown function 1 6484 6828
YP_009149829.1 NC_027356_p48 hypothetical protein phrog_31464 unknown function unknown function -1 24416 24577
YP_009149825.1 NC_027356_p44 hypothetical protein phrog_4821 unknown function unknown function -1 23065 23361
YP_009149865.1 NC_027356_p84 5'-3' and 3'-5' helicase phrog_3712 replication origin binding DNA, RNA and nucleotide metabolism 1 48315 51104
YP_009149878.1 NC_027356_p97 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 59011 61578
YP_009149857.1 NC_027356_p76 hypothetical protein phrog_5357 tail length tape measure protein tail -1 42718 42915
YP_009149903.1 NC_027356_p122 head protease phrog_80 head maturation protease head and packaging -1 91633 92265
YP_009149873.1 NC_027356_p92 NAD-dependent DNA ligase subunit A phrog_3359 NAD-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 53790 54764
YP_009149794.1 NC_027356_p13 hypothetical protein phrog_8993 unknown function unknown function -1 9069 9809
YP_009149897.1 NC_027356_p116 minor tail protein phrog_3889 base plate tail tube protein tail -1 86067 86969
YP_009149842.1 NC_027356_p61 cell wall hydrolase SleB phrog_938 endolysin lysis -1 32351 32800
YP_009149818.1 NC_027356_p37 ATP-dependent Clp protease phrog_1827 ATP-dependent protease other -1 19249 19848
YP_009149852.1 NC_027356_p71 dihydrofolate reductase phrog_316 dihydrofolate reductase DNA, RNA and nucleotide metabolism -1 37942 38475
YP_009149874.1 NC_027356_p93 NAD-dependent DNA ligase subunit B phrog_3498 NAD-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 54964 55746
YP_009149847.1 NC_027356_p66 hypothetical protein phrog_4586 unknown function unknown function -1 35262 35498
YP_009149816.1 NC_027356_p35 endolysin phrog_465 endolysin lysis -1 18025 18438
YP_009149795.1 NC_027356_p14 hypothetical protein phrog_13456 unknown function unknown function -1 9797 10138
YP_009149854.1 NC_027356_p73 family HNH nicking homing endonuclease F-TflVIII phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 39626 40141
YP_009149856.1 NC_027356_p75 aerobic ribonucleoside-diphosphate reductase large subunit phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism -1 40243 42573
YP_009149859.1 NC_027356_p78 anaerobic ribonucleoside-triphosphate reductase phrog_487 NrdD-like anaerobic ribonucleotide reductase large subunit moron, auxiliary metabolic gene and host takeover 1 44074 45900
YP_009149900.1 NC_027356_p119 tail completion protein phrog_3725 tail completion or Neck1 protein connector -1 88896 89663
YP_009149869.1 NC_027356_p88 D3 protein phrog_1725 DNA binding protein DNA, RNA and nucleotide metabolism 1 52443 52853
YP_009149797.1 NC_027356_p16 hypothetical protein phrog_5799 unknown function unknown function -1 10734 10919
YP_009149909.1 NC_027356_p128 receptor binding protein phrog_4815 receptor binding tail protein tail -1 96985 98745
YP_009149811.1 NC_027356_p30 serine/threonine protein phosphatase phrog_246 NinI-like serine-threonine phosphatase other -1 15529 16392
YP_009149871.1 NC_027356_p90 ssDNA-binding transcriptional regulator phrog_4053 transcriptional regulator transcription regulation 1 53206 53514
YP_009149890.1 NC_027356_p109 L-shaped tail fiber assembly phrog_1084 unknown function unknown function -1 75418 75840
YP_009149911.1 NC_027356_p130 hypothetical protein phrog_8596 unknown function unknown function 1 99274 99402
YP_009149866.1 NC_027356_p85 hypothetical protein phrog_5291 unknown function unknown function 1 51088 51321
YP_009149863.1 NC_027356_p82 hypothetical protein phrog_2502 unknown function unknown function 1 46768 47196
YP_009149849.1 NC_027356_p68 hypothetical protein phrog_4593 unknown function unknown function -1 36140 36418
YP_009149879.1 NC_027356_p98 hypothetical protein phrog_4386 unknown function unknown function 1 61571 62068
YP_009149845.1 NC_027356_p64 hypothetical protein phrog_5252 unknown function unknown function -1 34257 34439
YP_009149846.1 NC_027356_p65 metallopeptidase phrog_255 exonuclease DNA, RNA and nucleotide metabolism -1 34532 35233
YP_009149892.1 NC_027356_p111 baseplate hub protein phrog_31 central tail fiber J tail -1 77902 80751
YP_009149833.1 NC_027356_p52 hypothetical protein phrog_1119 Cor superinfection exclusion protein moron, auxiliary metabolic gene and host takeover -1 25998 26225
YP_009149862.1 NC_027356_p81 Sir2-like protein phrog_18062 Sir2 (NAD-dependent deacetylase) DNA, RNA and nucleotide metabolism 1 46493 46765
YP_009149810.1 NC_027356_p29 hypothetical protein phrog_547 phosphoesterase other -1 15008 15529
YP_009149864.1 NC_027356_p83 hypothetical protein phrog_2502 unknown function unknown function 1 47206 47598
YP_009149860.1 NC_027356_p79 hypothetical protein phrog_20147 unknown function unknown function 1 46000 46212
YP_009149808.1 NC_027356_p27 hypothetical protein phrog_3880 unknown function unknown function -1 14082 14333
YP_009149872.1 NC_027356_p91 hypothetical protein phrog_8267 unknown function unknown function 1 53606 53800
YP_009149914.1 NC_027356_p133 hypothetical protein phrog_6447 membrane protein moron, auxiliary metabolic gene and host takeover 1 99693 99938
YP_009149826.1 NC_027356_p45 hypothetical protein phrog_2855 unknown function unknown function -1 23354 23635
YP_009149881.1 NC_027356_p100 hypothetical protein phrog_4258 unknown function unknown function 1 63638 63922
YP_009149908.1 NC_027356_p127 terminase small subunit phrog_3802 terminase small subunit head and packaging -1 96492 96974
YP_009149882.1 NC_027356_p101 D11 protein phrog_1607 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 63915 64688
YP_009149831.1 NC_027356_p50 hypothetical protein phrog_4760 unknown function unknown function -1 25221 25511
YP_009149843.1 NC_027356_p62 hypothetical protein phrog_1479 unknown function unknown function -1 32806 33123
YP_009149895.1 NC_027356_p114 hypothetical protein phrog_3914 tail assembly chaperone tail -1 85240 85608
YP_009149838.1 NC_027356_p57 hypothetical protein phrog_849 DNA primase DNA, RNA and nucleotide metabolism -1 29205 29723
YP_009149801.1 NC_027356_p20 hypothetical protein phrog_6933 unknown function unknown function -1 11883 12086
YP_009149837.1 NC_027356_p56 hypothetical protein phrog_7716 unknown function unknown function -1 28831 28998
YP_009149822.1 NC_027356_p41 hypothetical protein phrog_4243 unknown function unknown function -1 21337 22017
YP_009149906.1 NC_027356_p125 nicking site-specific endonuclease phrog_3497 unknown function unknown function -1 94220 94657
YP_009149868.1 NC_027356_p87 hypothetical protein phrog_643 transcriptional regulator transcription regulation 1 52088 52339
YP_009149799.1 NC_027356_p18 hypothetical protein phrog_9887 unknown function unknown function -1 11152 11442
YP_009149786.1 NC_027356_p5 DNA-binding protein phrog_1725 DNA binding protein DNA, RNA and nucleotide metabolism -1 3421 3837
YP_009149813.1 NC_027356_p32 thioredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 16738 17028
YP_009149896.1 NC_027356_p115 hypothetical protein phrog_313 Tail assembly chaperone tail -1 85670 86074
YP_009149819.1 NC_027356_p38 deoxynucleoside-5'-monophosphate kinase phrog_139 deoxynucleoside monophosphate kinase other -1 19861 20613
YP_009149912.1 NC_027356_p131 hypothetical protein phrog_6369 unknown function unknown function 1 99402 99509
YP_009149809.1 NC_027356_p28 hypothetical protein phrog_4979 unknown function unknown function -1 14412 14840
YP_009149832.1 NC_027356_p51 hypothetical protein phrog_2210 unknown function unknown function -1 25786 25995
YP_009149867.1 NC_027356_p86 D2 protein phrog_3611 helicase DNA, RNA and nucleotide metabolism 1 51391 52095
YP_009149891.1 NC_027356_p110 central straight fiber phrog_3890 straight fibre tail protein tail -1 75845 77902
YP_009149804.1 NC_027356_p23 hypothetical protein phrog_5967 unknown function unknown function -1 12920 13120
YP_009149827.1 NC_027356_p46 hypothetical protein phrog_5021 unknown function unknown function -1 23712 24059
YP_009149814.1 NC_027356_p33 hypothetical protein phrog_4328 unknown function unknown function -1 17021 17452
YP_009149802.1 NC_027356_p21 hypothetical protein phrog_4905 unknown function unknown function -1 12143 12514
YP_009149905.1 NC_027356_p124 portal protein phrog_12 portal protein head and packaging -1 93003 94220
YP_009149836.1 NC_027356_p55 hypothetical protein phrog_5153 unknown function unknown function -1 28632 28838
YP_009149817.1 NC_027356_p36 holin phrog_860 holin lysis -1 18435 19091
YP_009149841.1 NC_027356_p60 hypothetical protein phrog_5077 unknown function unknown function -1 32112 32282
YP_009149835.1 NC_027356_p54 hypothetical protein phrog_5473 unknown function unknown function -1 28005 28190
YP_009149784.1 NC_027356_p3 DNA transfer protein phrog_1745 DNA transfer protein other -1 1404 3068
YP_009149899.1 NC_027356_p118 tail terminator protein phrog_3907 tail terminator connector -1 88407 88892
YP_009149858.1 NC_027356_p77 PhoH-like protein phrog_170 PhoH-like phosphate starvation-inducible other -1 42917 43669
YP_009149848.1 NC_027356_p67 hypothetical protein phrog_4516 unknown function unknown function -1 35541 36056
YP_009149790.1 NC_027356_p9 hypothetical protein phrog_5607 unknown function unknown function 1 5966 6145
YP_009149824.1 NC_027356_p43 hypothetical protein phrog_5265 unknown function unknown function -1 22627 22911
YP_009149870.1 NC_027356_p89 hypothetical protein phrog_3696 unknown function unknown function 1 52868 53155
YP_009149806.1 NC_027356_p25 hypothetical protein phrog_4804 unknown function unknown function -1 13536 13781
YP_009149894.1 NC_027356_p113 tape measure protein phrog_3779 tail length tape measure protein tail -1 81472 85155
YP_009149887.1 NC_027356_p106 deoxyuridine 5'-triphosphate nucleotidohydrolase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 68879 69325
YP_009149805.1 NC_027356_p24 hypothetical protein phrog_4731 unknown function unknown function -1 13220 13546
YP_009149793.1 NC_027356_p12 homing endonuclease P-TflXVII phrog_18411 homing endonuclease DNA, RNA and nucleotide metabolism -1 8726 9082
YP_009149910.1 NC_027356_p129 receptor-blocking protein phrog_1119 Cor superinfection exclusion protein moron, auxiliary metabolic gene and host takeover 1 98831 99097
YP_009149788.1 NC_027356_p7 hypothetical protein phrog_17446 unknown function unknown function -1 4697 4873
YP_009149883.1 NC_027356_p102 exonuclease SbcCD D subunit phrog_100 SbcD-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism 1 64725 65702
YP_009149821.1 NC_027356_p40 hypothetical protein phrog_739 Rz-like spanin lysis -1 20897 21340
YP_009149828.1 NC_027356_p47 hypothetical protein phrog_4499 unknown function unknown function -1 24181 24495
YP_009149782.1 NC_027356_p1 deoxynucleoside-5'-monophosphatase phrog_415 polynucleotide kinase other -1 124 858
YP_009149798.1 NC_027356_p17 hypothetical protein phrog_6021 unknown function unknown function -1 10919 11152
YP_009149893.1 NC_027356_p112 distal tail protein phrog_1302 distal tail protein tail -1 80748 81362
YP_009149796.1 NC_027356_p15 hypothetical protein phrog_5271 unknown function unknown function -1 10138 10734
YP_009149876.1 NC_027356_p95 replicative DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 56538 58061
YP_009149839.1 NC_027356_p58 hypothetical protein phrog_200 lipoprotein other -1 29935 30882
YP_009149807.1 NC_027356_p26 hypothetical protein phrog_4984 unknown function unknown function -1 13778 14059
YP_009149853.1 NC_027356_p72 aerobic ribonucleoside-diphosphate reductase small subunit phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism -1 38472 39617
YP_009149855.1 NC_027356_p74 H-N-H-endonuclease P-TflVIII phrog_33459 HNH endonuclease DNA, RNA and nucleotide metabolism 1 39930 40160
YP_009149907.1 NC_027356_p126 terminase large subunit phrog_2 terminase large subunit head and packaging -1 95176 96492
YP_009149861.1 NC_027356_p80 hypothetical protein phrog_5236 unknown function unknown function 1 46209 46439