| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_027356 |
Definition |
Enterobacteria phage DT57C, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Markadamsvirinae; Tequintavirus. |
DB of origin |
REFSEQ |
Length |
108065 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
133 |
%GC |
39.65 |
Number of singletons |
1 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009149791.1 | NC_027356_p10 | hypothetical protein | phrog_4227 | endonuclease nicking abasic sites generated by host uracil glycosylase Ung | moron, auxiliary metabolic gene and host takeover | 1 | 6148 | 6360 |
| YP_009149783.1 | NC_027356_p2 | hypothetical protein | phrog_4576 | unknown function | unknown function | -1 | 933 | 1334 |
| YP_009149884.1 | NC_027356_p103 | exonuclease SbcCD C subunit | phrog_77 | SbcC-like subunit of palindrome specific endonuclease | DNA, RNA and nucleotide metabolism | 1 | 65683 | 67521 |
| YP_009149815.1 | NC_027356_p34 | hypothetical protein | phrog_5944 | unknown function | unknown function | -1 | 17528 | 17944 |
| YP_009149823.1 | NC_027356_p42 | hypothetical protein | phrog_5468 | unknown function | unknown function | -1 | 22172 | 22516 |
| YP_009149800.1 | NC_027356_p19 | hypothetical protein | phrog_4605 | unknown function | unknown function | -1 | 11435 | 11881 |
| YP_009149787.1 | NC_027356_p6 | hypothetical protein | phrog_3747 | unknown function | unknown function | -1 | 3938 | 4189 |
| YP_009149789.1 | NC_027356_p8 | repeat completion protein | singleton | unknown function | unknown function | -1 | 5237 | 5431 |
| YP_009149889.1 | NC_027356_p108 | L-shaped tail fiber assembly | phrog_10305 | tail fiber protein | tail | -1 | 72188 | 75418 |
| YP_009149886.1 | NC_027356_p105 | flap endonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 68007 | 68882 |
| YP_009149851.1 | NC_027356_p70 | thymidylate synthase | phrog_160 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 37103 | 37942 |
| YP_009149803.1 | NC_027356_p22 | hypothetical protein | phrog_4215 | unknown function | unknown function | -1 | 12462 | 12923 |
| YP_009149888.1 | NC_027356_p107 | L-shaped tail fiber assembly | phrog_6921 | tail fiber protein | tail | -1 | 69783 | 72149 |
| YP_009149902.1 | NC_027356_p121 | major head protein | phrog_10 | major head protein | head and packaging | -1 | 90239 | 91615 |
| YP_009149820.1 | NC_027356_p39 | hypothetical protein | phrog_812 | Rz-like spanin | lysis | -1 | 20613 | 20966 |
| YP_009149830.1 | NC_027356_p49 | autonomous glycyl radical cofactor GrcA | phrog_1209 | unknown function | unknown function | -1 | 24577 | 24945 |
| YP_009149901.1 | NC_027356_p120 | head completion protein | phrog_442 | head-tail adaptor | connector | -1 | 89663 | 90175 |
| YP_009149785.1 | NC_027356_p4 | hypothetical protein | phrog_4820 | membrane protein | moron, auxiliary metabolic gene and host takeover | -1 | 3166 | 3363 |
| YP_009149834.1 | NC_027356_p53 | hypothetical protein | phrog_3972 | unknown function | unknown function | -1 | 27549 | 27896 |
| YP_009149844.1 | NC_027356_p63 | hypothetical protein | phrog_1491 | tail fiber protein | tail | -1 | 33566 | 34204 |
| YP_009149840.1 | NC_027356_p59 | hypothetical protein | phrog_1460 | tRNA amidotransferase | DNA, RNA and nucleotide metabolism | -1 | 31678 | 32112 |
| YP_009149812.1 | NC_027356_p31 | hypothetical protein | phrog_7354 | major head protein | head and packaging | -1 | 16395 | 16640 |
| YP_009149904.1 | NC_027356_p123 | decorating protein | phrog_2973 | Hoc-like head decoration | head and packaging | -1 | 92269 | 93006 |
| YP_009149850.1 | NC_027356_p69 | RNase H1 | phrog_531 | Rnase H | DNA, RNA and nucleotide metabolism | -1 | 36495 | 36971 |
| YP_009149877.1 | NC_027356_p96 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 58058 | 58948 |
| YP_009149885.1 | NC_027356_p104 | D14 protein/ resolvase | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 67525 | 68007 |
| YP_009149913.1 | NC_027356_p132 | hypothetical protein | phrog_5851 | unknown function | unknown function | 1 | 99506 | 99700 |
| YP_009149880.1 | NC_027356_p99 | helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 62065 | 63417 |
| YP_009149898.1 | NC_027356_p117 | tail tube protein | phrog_3575 | major tail protein | tail | -1 | 86974 | 88380 |
| YP_009149875.1 | NC_027356_p94 | D5 protein/DNA-binding protein | phrog_323 | transcriptional regulator, D5-like | transcription regulation | 1 | 55739 | 56506 |
| YP_009149792.1 | NC_027356_p11 | hypothetical protein | phrog_4379 | unknown function | unknown function | 1 | 6484 | 6828 |
| YP_009149829.1 | NC_027356_p48 | hypothetical protein | phrog_31464 | unknown function | unknown function | -1 | 24416 | 24577 |
| YP_009149825.1 | NC_027356_p44 | hypothetical protein | phrog_4821 | unknown function | unknown function | -1 | 23065 | 23361 |
| YP_009149865.1 | NC_027356_p84 | 5'-3' and 3'-5' helicase | phrog_3712 | replication origin binding | DNA, RNA and nucleotide metabolism | 1 | 48315 | 51104 |
| YP_009149878.1 | NC_027356_p97 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 59011 | 61578 |
| YP_009149857.1 | NC_027356_p76 | hypothetical protein | phrog_5357 | tail length tape measure protein | tail | -1 | 42718 | 42915 |
| YP_009149903.1 | NC_027356_p122 | head protease | phrog_80 | head maturation protease | head and packaging | -1 | 91633 | 92265 |
| YP_009149873.1 | NC_027356_p92 | NAD-dependent DNA ligase subunit A | phrog_3359 | NAD-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 53790 | 54764 |
| YP_009149794.1 | NC_027356_p13 | hypothetical protein | phrog_8993 | unknown function | unknown function | -1 | 9069 | 9809 |
| YP_009149897.1 | NC_027356_p116 | minor tail protein | phrog_3889 | base plate tail tube protein | tail | -1 | 86067 | 86969 |
| YP_009149842.1 | NC_027356_p61 | cell wall hydrolase SleB | phrog_938 | endolysin | lysis | -1 | 32351 | 32800 |
| YP_009149818.1 | NC_027356_p37 | ATP-dependent Clp protease | phrog_1827 | ATP-dependent protease | other | -1 | 19249 | 19848 |
| YP_009149852.1 | NC_027356_p71 | dihydrofolate reductase | phrog_316 | dihydrofolate reductase | DNA, RNA and nucleotide metabolism | -1 | 37942 | 38475 |
| YP_009149874.1 | NC_027356_p93 | NAD-dependent DNA ligase subunit B | phrog_3498 | NAD-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 54964 | 55746 |
| YP_009149847.1 | NC_027356_p66 | hypothetical protein | phrog_4586 | unknown function | unknown function | -1 | 35262 | 35498 |
| YP_009149816.1 | NC_027356_p35 | endolysin | phrog_465 | endolysin | lysis | -1 | 18025 | 18438 |
| YP_009149795.1 | NC_027356_p14 | hypothetical protein | phrog_13456 | unknown function | unknown function | -1 | 9797 | 10138 |
| YP_009149854.1 | NC_027356_p73 | family HNH nicking homing endonuclease F-TflVIII | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 39626 | 40141 |
| YP_009149856.1 | NC_027356_p75 | aerobic ribonucleoside-diphosphate reductase large subunit | phrog_84 | ribonucleoside-diphosphate reductase large subunit | DNA, RNA and nucleotide metabolism | -1 | 40243 | 42573 |
| YP_009149859.1 | NC_027356_p78 | anaerobic ribonucleoside-triphosphate reductase | phrog_487 | NrdD-like anaerobic ribonucleotide reductase large subunit | moron, auxiliary metabolic gene and host takeover | 1 | 44074 | 45900 |
| YP_009149900.1 | NC_027356_p119 | tail completion protein | phrog_3725 | tail completion or Neck1 protein | connector | -1 | 88896 | 89663 |
| YP_009149869.1 | NC_027356_p88 | D3 protein | phrog_1725 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 52443 | 52853 |
| YP_009149797.1 | NC_027356_p16 | hypothetical protein | phrog_5799 | unknown function | unknown function | -1 | 10734 | 10919 |
| YP_009149909.1 | NC_027356_p128 | receptor binding protein | phrog_4815 | receptor binding tail protein | tail | -1 | 96985 | 98745 |
| YP_009149811.1 | NC_027356_p30 | serine/threonine protein phosphatase | phrog_246 | NinI-like serine-threonine phosphatase | other | -1 | 15529 | 16392 |
| YP_009149871.1 | NC_027356_p90 | ssDNA-binding transcriptional regulator | phrog_4053 | transcriptional regulator | transcription regulation | 1 | 53206 | 53514 |
| YP_009149890.1 | NC_027356_p109 | L-shaped tail fiber assembly | phrog_1084 | unknown function | unknown function | -1 | 75418 | 75840 |
| YP_009149911.1 | NC_027356_p130 | hypothetical protein | phrog_8596 | unknown function | unknown function | 1 | 99274 | 99402 |
| YP_009149866.1 | NC_027356_p85 | hypothetical protein | phrog_5291 | unknown function | unknown function | 1 | 51088 | 51321 |
| YP_009149863.1 | NC_027356_p82 | hypothetical protein | phrog_2502 | unknown function | unknown function | 1 | 46768 | 47196 |
| YP_009149849.1 | NC_027356_p68 | hypothetical protein | phrog_4593 | unknown function | unknown function | -1 | 36140 | 36418 |
| YP_009149879.1 | NC_027356_p98 | hypothetical protein | phrog_4386 | unknown function | unknown function | 1 | 61571 | 62068 |
| YP_009149845.1 | NC_027356_p64 | hypothetical protein | phrog_5252 | unknown function | unknown function | -1 | 34257 | 34439 |
| YP_009149846.1 | NC_027356_p65 | metallopeptidase | phrog_255 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 34532 | 35233 |
| YP_009149892.1 | NC_027356_p111 | baseplate hub protein | phrog_31 | central tail fiber J | tail | -1 | 77902 | 80751 |
| YP_009149833.1 | NC_027356_p52 | hypothetical protein | phrog_1119 | Cor superinfection exclusion protein | moron, auxiliary metabolic gene and host takeover | -1 | 25998 | 26225 |
| YP_009149862.1 | NC_027356_p81 | Sir2-like protein | phrog_18062 | Sir2 (NAD-dependent deacetylase) | DNA, RNA and nucleotide metabolism | 1 | 46493 | 46765 |
| YP_009149810.1 | NC_027356_p29 | hypothetical protein | phrog_547 | phosphoesterase | other | -1 | 15008 | 15529 |
| YP_009149864.1 | NC_027356_p83 | hypothetical protein | phrog_2502 | unknown function | unknown function | 1 | 47206 | 47598 |
| YP_009149860.1 | NC_027356_p79 | hypothetical protein | phrog_20147 | unknown function | unknown function | 1 | 46000 | 46212 |
| YP_009149808.1 | NC_027356_p27 | hypothetical protein | phrog_3880 | unknown function | unknown function | -1 | 14082 | 14333 |
| YP_009149872.1 | NC_027356_p91 | hypothetical protein | phrog_8267 | unknown function | unknown function | 1 | 53606 | 53800 |
| YP_009149914.1 | NC_027356_p133 | hypothetical protein | phrog_6447 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 99693 | 99938 |
| YP_009149826.1 | NC_027356_p45 | hypothetical protein | phrog_2855 | unknown function | unknown function | -1 | 23354 | 23635 |
| YP_009149881.1 | NC_027356_p100 | hypothetical protein | phrog_4258 | unknown function | unknown function | 1 | 63638 | 63922 |
| YP_009149908.1 | NC_027356_p127 | terminase small subunit | phrog_3802 | terminase small subunit | head and packaging | -1 | 96492 | 96974 |
| YP_009149882.1 | NC_027356_p101 | D11 protein | phrog_1607 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 63915 | 64688 |
| YP_009149831.1 | NC_027356_p50 | hypothetical protein | phrog_4760 | unknown function | unknown function | -1 | 25221 | 25511 |
| YP_009149843.1 | NC_027356_p62 | hypothetical protein | phrog_1479 | unknown function | unknown function | -1 | 32806 | 33123 |
| YP_009149895.1 | NC_027356_p114 | hypothetical protein | phrog_3914 | tail assembly chaperone | tail | -1 | 85240 | 85608 |
| YP_009149838.1 | NC_027356_p57 | hypothetical protein | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 29205 | 29723 |
| YP_009149801.1 | NC_027356_p20 | hypothetical protein | phrog_6933 | unknown function | unknown function | -1 | 11883 | 12086 |
| YP_009149837.1 | NC_027356_p56 | hypothetical protein | phrog_7716 | unknown function | unknown function | -1 | 28831 | 28998 |
| YP_009149822.1 | NC_027356_p41 | hypothetical protein | phrog_4243 | unknown function | unknown function | -1 | 21337 | 22017 |
| YP_009149906.1 | NC_027356_p125 | nicking site-specific endonuclease | phrog_3497 | unknown function | unknown function | -1 | 94220 | 94657 |
| YP_009149868.1 | NC_027356_p87 | hypothetical protein | phrog_643 | transcriptional regulator | transcription regulation | 1 | 52088 | 52339 |
| YP_009149799.1 | NC_027356_p18 | hypothetical protein | phrog_9887 | unknown function | unknown function | -1 | 11152 | 11442 |
| YP_009149786.1 | NC_027356_p5 | DNA-binding protein | phrog_1725 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 3421 | 3837 |
| YP_009149813.1 | NC_027356_p32 | thioredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 16738 | 17028 |
| YP_009149896.1 | NC_027356_p115 | hypothetical protein | phrog_313 | Tail assembly chaperone | tail | -1 | 85670 | 86074 |
| YP_009149819.1 | NC_027356_p38 | deoxynucleoside-5'-monophosphate kinase | phrog_139 | deoxynucleoside monophosphate kinase | other | -1 | 19861 | 20613 |
| YP_009149912.1 | NC_027356_p131 | hypothetical protein | phrog_6369 | unknown function | unknown function | 1 | 99402 | 99509 |
| YP_009149809.1 | NC_027356_p28 | hypothetical protein | phrog_4979 | unknown function | unknown function | -1 | 14412 | 14840 |
| YP_009149832.1 | NC_027356_p51 | hypothetical protein | phrog_2210 | unknown function | unknown function | -1 | 25786 | 25995 |
| YP_009149867.1 | NC_027356_p86 | D2 protein | phrog_3611 | helicase | DNA, RNA and nucleotide metabolism | 1 | 51391 | 52095 |
| YP_009149891.1 | NC_027356_p110 | central straight fiber | phrog_3890 | straight fibre tail protein | tail | -1 | 75845 | 77902 |
| YP_009149804.1 | NC_027356_p23 | hypothetical protein | phrog_5967 | unknown function | unknown function | -1 | 12920 | 13120 |
| YP_009149827.1 | NC_027356_p46 | hypothetical protein | phrog_5021 | unknown function | unknown function | -1 | 23712 | 24059 |
| YP_009149814.1 | NC_027356_p33 | hypothetical protein | phrog_4328 | unknown function | unknown function | -1 | 17021 | 17452 |
| YP_009149802.1 | NC_027356_p21 | hypothetical protein | phrog_4905 | unknown function | unknown function | -1 | 12143 | 12514 |
| YP_009149905.1 | NC_027356_p124 | portal protein | phrog_12 | portal protein | head and packaging | -1 | 93003 | 94220 |
| YP_009149836.1 | NC_027356_p55 | hypothetical protein | phrog_5153 | unknown function | unknown function | -1 | 28632 | 28838 |
| YP_009149817.1 | NC_027356_p36 | holin | phrog_860 | holin | lysis | -1 | 18435 | 19091 |
| YP_009149841.1 | NC_027356_p60 | hypothetical protein | phrog_5077 | unknown function | unknown function | -1 | 32112 | 32282 |
| YP_009149835.1 | NC_027356_p54 | hypothetical protein | phrog_5473 | unknown function | unknown function | -1 | 28005 | 28190 |
| YP_009149784.1 | NC_027356_p3 | DNA transfer protein | phrog_1745 | DNA transfer protein | other | -1 | 1404 | 3068 |
| YP_009149899.1 | NC_027356_p118 | tail terminator protein | phrog_3907 | tail terminator | connector | -1 | 88407 | 88892 |
| YP_009149858.1 | NC_027356_p77 | PhoH-like protein | phrog_170 | PhoH-like phosphate starvation-inducible | other | -1 | 42917 | 43669 |
| YP_009149848.1 | NC_027356_p67 | hypothetical protein | phrog_4516 | unknown function | unknown function | -1 | 35541 | 36056 |
| YP_009149790.1 | NC_027356_p9 | hypothetical protein | phrog_5607 | unknown function | unknown function | 1 | 5966 | 6145 |
| YP_009149824.1 | NC_027356_p43 | hypothetical protein | phrog_5265 | unknown function | unknown function | -1 | 22627 | 22911 |
| YP_009149870.1 | NC_027356_p89 | hypothetical protein | phrog_3696 | unknown function | unknown function | 1 | 52868 | 53155 |
| YP_009149806.1 | NC_027356_p25 | hypothetical protein | phrog_4804 | unknown function | unknown function | -1 | 13536 | 13781 |
| YP_009149894.1 | NC_027356_p113 | tape measure protein | phrog_3779 | tail length tape measure protein | tail | -1 | 81472 | 85155 |
| YP_009149887.1 | NC_027356_p106 | deoxyuridine 5'-triphosphate nucleotidohydrolase | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism | 1 | 68879 | 69325 |
| YP_009149805.1 | NC_027356_p24 | hypothetical protein | phrog_4731 | unknown function | unknown function | -1 | 13220 | 13546 |
| YP_009149793.1 | NC_027356_p12 | homing endonuclease P-TflXVII | phrog_18411 | homing endonuclease | DNA, RNA and nucleotide metabolism | -1 | 8726 | 9082 |
| YP_009149910.1 | NC_027356_p129 | receptor-blocking protein | phrog_1119 | Cor superinfection exclusion protein | moron, auxiliary metabolic gene and host takeover | 1 | 98831 | 99097 |
| YP_009149788.1 | NC_027356_p7 | hypothetical protein | phrog_17446 | unknown function | unknown function | -1 | 4697 | 4873 |
| YP_009149883.1 | NC_027356_p102 | exonuclease SbcCD D subunit | phrog_100 | SbcD-like subunit of palindrome specific endonuclease | DNA, RNA and nucleotide metabolism | 1 | 64725 | 65702 |
| YP_009149821.1 | NC_027356_p40 | hypothetical protein | phrog_739 | Rz-like spanin | lysis | -1 | 20897 | 21340 |
| YP_009149828.1 | NC_027356_p47 | hypothetical protein | phrog_4499 | unknown function | unknown function | -1 | 24181 | 24495 |
| YP_009149782.1 | NC_027356_p1 | deoxynucleoside-5'-monophosphatase | phrog_415 | polynucleotide kinase | other | -1 | 124 | 858 |
| YP_009149798.1 | NC_027356_p17 | hypothetical protein | phrog_6021 | unknown function | unknown function | -1 | 10919 | 11152 |
| YP_009149893.1 | NC_027356_p112 | distal tail protein | phrog_1302 | distal tail protein | tail | -1 | 80748 | 81362 |
| YP_009149796.1 | NC_027356_p15 | hypothetical protein | phrog_5271 | unknown function | unknown function | -1 | 10138 | 10734 |
| YP_009149876.1 | NC_027356_p95 | replicative DNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 56538 | 58061 |
| YP_009149839.1 | NC_027356_p58 | hypothetical protein | phrog_200 | lipoprotein | other | -1 | 29935 | 30882 |
| YP_009149807.1 | NC_027356_p26 | hypothetical protein | phrog_4984 | unknown function | unknown function | -1 | 13778 | 14059 |
| YP_009149853.1 | NC_027356_p72 | aerobic ribonucleoside-diphosphate reductase small subunit | phrog_86 | ribonucleoside diphosphate reductase small subunit | DNA, RNA and nucleotide metabolism | -1 | 38472 | 39617 |
| YP_009149855.1 | NC_027356_p74 | H-N-H-endonuclease P-TflVIII | phrog_33459 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 39930 | 40160 |
| YP_009149907.1 | NC_027356_p126 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | -1 | 95176 | 96492 |
| YP_009149861.1 | NC_027356_p80 | hypothetical protein | phrog_5236 | unknown function | unknown function | 1 | 46209 | 46439 |