| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_027357 |
Definition |
Propionibacterium phage PHL025M00, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus. |
DB of origin |
REFSEQ |
Length |
29496 |
Host Name |
Propionibacterium acnes |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
43 |
%GC |
53.98 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009149920.1 | NC_027357_p6 | major head protein | phrog_10 | major head protein | head and packaging | 1 | 4638 | 5585 |
| YP_009149921.1 | NC_027357_p7 | hypothetical protein | phrog_1290 | head-tail adaptor | connector | 1 | 5630 | 6091 |
| YP_009149933.1 | NC_027357_p19 | collagen-like protein | phrog_1806 | collagen like minor tail | tail | 1 | 14586 | 15392 |
| YP_009149941.1 | NC_027357_p27 | hypothetical protein | phrog_1923 | unknown function | unknown function | -1 | 19372 | 19566 |
| YP_009149916.1 | NC_027357_p2 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 435 | 1889 |
| YP_009149922.1 | NC_027357_p8 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 6093 | 6440 |
| YP_009149915.1 | NC_027357_p1 | excinuclease | phrog_1897 | terminase small subunit | head and packaging | 1 | 2 | 373 |
| YP_009149932.1 | NC_027357_p18 | hypothetical protein | phrog_1958 | minor tail protein | tail | 1 | 14319 | 14582 |
| YP_009149939.1 | NC_027357_p25 | hypothetical protein | phrog_1340 | unknown function | unknown function | -1 | 17998 | 18318 |
| YP_009149950.1 | NC_027357_p36 | exonuclease | phrog_1870 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 23774 | 24721 |
| YP_009149935.1 | NC_027357_p21 | holin | phrog_443 | holin | lysis | 1 | 16304 | 16702 |
| YP_009149925.1 | NC_027357_p11 | major tail protein | phrog_117 | major tail protein | tail | 1 | 7159 | 7812 |
| YP_009149954.1 | NC_027357_p40 | hypothetical protein | phrog_1908 | unknown function | unknown function | -1 | 25638 | 26171 |
| YP_009149957.1 | NC_027357_p43 | endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 29143 | 29445 |
| YP_009149943.1 | NC_027357_p29 | hypothetical protein | phrog_1881 | unknown function | unknown function | -1 | 20113 | 20676 |
| YP_009149947.1 | NC_027357_p33 | DNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 21945 | 22808 |
| YP_009149931.1 | NC_027357_p17 | hypothetical protein | phrog_1910 | lectin | other | 1 | 13444 | 14262 |
| YP_009149940.1 | NC_027357_p26 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18329 | 19375 |
| YP_009149937.1 | NC_027357_p23 | sigma factor | phrog_1729 | unknown function | unknown function | -1 | 17315 | 17707 |
| YP_009149919.1 | NC_027357_p5 | scaffold protein | phrog_1879 | head scaffolding protein | head and packaging | 1 | 4077 | 4631 |
| YP_009149927.1 | NC_027357_p13 | hypothetical protein | phrog_3166 | unknown function | unknown function | 1 | 8234 | 8521 |
| YP_009149938.1 | NC_027357_p24 | hypothetical protein | phrog_1947 | unknown function | unknown function | -1 | 17711 | 17986 |
| YP_009149917.1 | NC_027357_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 1886 | 3211 |
| YP_009149918.1 | NC_027357_p4 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 3218 | 3973 |
| YP_009149926.1 | NC_027357_p12 | hypothetical protein | phrog_1927 | tail assembly chaperone | tail | 1 | 7839 | 8135 |
| YP_009149951.1 | NC_027357_p37 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 24721 | 25080 |
| YP_009149942.1 | NC_027357_p28 | hypothetical protein | phrog_2548 | unknown function | unknown function | -1 | 19550 | 20116 |
| YP_009149930.1 | NC_027357_p16 | protease | phrog_110 | minor tail protein | tail | 1 | 12266 | 13423 |
| YP_009149936.1 | NC_027357_p22 | hypothetical protein | phrog_2092 | unknown function | unknown function | -1 | 16789 | 17310 |
| YP_009149955.1 | NC_027357_p41 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26292 | 26603 |
| YP_009149923.1 | NC_027357_p9 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 6459 | 6737 |
| YP_009149944.1 | NC_027357_p30 | DNA primase | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20720 | 21391 |
| YP_009149952.1 | NC_027357_p38 | hypothetical protein | phrog_1937 | unknown function | unknown function | -1 | 25186 | 25389 |
| YP_009149956.1 | NC_027357_p42 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26643 | 26951 |
| YP_009149953.1 | NC_027357_p39 | hypothetical protein | phrog_1884 | unknown function | unknown function | -1 | 25386 | 25613 |
| YP_009149948.1 | NC_027357_p34 | hypothetical protein | phrog_1288 | unknown function | unknown function | -1 | 22846 | 23316 |
| YP_009149924.1 | NC_027357_p10 | hypothetical protein | phrog_1892 | minor tail protein | tail | 1 | 6734 | 7105 |
| YP_009149934.1 | NC_027357_p20 | endolysin | phrog_670 | endolysin | lysis | 1 | 15437 | 16297 |
| YP_009149945.1 | NC_027357_p31 | DNA primase | phrog_2304 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 21228 | 21629 |
| YP_009149928.1 | NC_027357_p14 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 8529 | 11294 |
| YP_009149929.1 | NC_027357_p15 | minor tail subunit | phrog_106 | minor tail protein | tail | 1 | 11362 | 12258 |
| YP_009149949.1 | NC_027357_p35 | hypothetical protein | phrog_1890 | unknown function | unknown function | -1 | 23367 | 23777 |
| YP_009149946.1 | NC_027357_p32 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 21589 | 21948 |