| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_027359 |
Definition |
Propionibacterium phage PHL082M00, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus; unclassified Pahexavirus. |
DB of origin |
REFSEQ |
Length |
29491 |
Host Name |
Propionibacterium acnes |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
47 |
%GC |
54.37 |
Number of singletons |
1 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009150015.1 | NC_027359_p10 | hypothetical protein | phrog_1892 | minor tail protein | tail | 1 | 6757 | 7128 |
| YP_009150014.1 | NC_027359_p9 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 6470 | 6760 |
| YP_009150028.1 | NC_027359_p23 | sigma factor | phrog_1729 | unknown function | unknown function | -1 | 17284 | 17676 |
| YP_009150052.1 | NC_027359_p47 | endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 29135 | 29440 |
| YP_009150043.1 | NC_027359_p38 | hypothetical protein | phrog_1937 | unknown function | unknown function | -1 | 24843 | 25046 |
| YP_009150038.1 | NC_027359_p33 | DNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 21525 | 22478 |
| YP_009150026.1 | NC_027359_p21 | holin | phrog_443 | holin | lysis | 1 | 16284 | 16682 |
| YP_009150034.1 | NC_027359_p29 | hypothetical protein | phrog_1881 | unknown function | unknown function | -1 | 19789 | 20346 |
| YP_009150010.1 | NC_027359_p5 | scaffold protein | phrog_1879 | head scaffolding protein | head and packaging | 1 | 4077 | 4631 |
| YP_009150019.1 | NC_027359_p14 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 8543 | 11308 |
| YP_009150031.1 | NC_027359_p26 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18295 | 19341 |
| YP_009150048.1 | NC_027359_p43 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26672 | 26980 |
| YP_009150039.1 | NC_027359_p34 | hypothetical protein | phrog_1288 | unknown function | unknown function | -1 | 22525 | 23085 |
| YP_009150020.1 | NC_027359_p15 | minor tail subunit | phrog_106 | minor tail protein | tail | 1 | 11305 | 12264 |
| YP_009150037.1 | NC_027359_p32 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 21259 | 21648 |
| YP_009150032.1 | NC_027359_p27 | hypothetical protein | phrog_1923 | unknown function | unknown function | -1 | 19338 | 19535 |
| YP_009150024.1 | NC_027359_p19 | collagen-like protein | phrog_1806 | collagen like minor tail | tail | 1 | 14592 | 15362 |
| YP_009150049.1 | NC_027359_p44 | hypothetical protein | singleton | unknown function | unknown function | -1 | 27205 | 27318 |
| YP_009150030.1 | NC_027359_p25 | hypothetical protein | phrog_1340 | unknown function | unknown function | -1 | 17967 | 18287 |
| YP_009150035.1 | NC_027359_p30 | DNA primase | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20390 | 21061 |
| YP_009150027.1 | NC_027359_p22 | hypothetical protein | phrog_2092 | unknown function | unknown function | -1 | 16767 | 17279 |
| YP_009150036.1 | NC_027359_p31 | DNA primase | phrog_2304 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20898 | 21299 |
| YP_009150041.1 | NC_027359_p36 | exonuclease | phrog_1870 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 23437 | 24378 |
| YP_009150017.1 | NC_027359_p12 | hypothetical protein | phrog_1927 | tail assembly chaperone | tail | 1 | 7853 | 8149 |
| YP_009150009.1 | NC_027359_p4 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 3218 | 3973 |
| YP_009150022.1 | NC_027359_p17 | hypothetical protein | phrog_1910 | lectin | other | 1 | 13450 | 14268 |
| YP_009150051.1 | NC_027359_p46 | hypothetical protein | phrog_7333 | unknown function | unknown function | 1 | 28967 | 29101 |
| YP_009150021.1 | NC_027359_p16 | protease | phrog_110 | minor tail protein | tail | 1 | 12272 | 13429 |
| YP_009150023.1 | NC_027359_p18 | hypothetical protein | phrog_1958 | minor tail protein | tail | 1 | 14325 | 14588 |
| YP_009150044.1 | NC_027359_p39 | hypothetical protein | phrog_1884 | unknown function | unknown function | -1 | 25043 | 25270 |
| YP_009150011.1 | NC_027359_p6 | major head protein | phrog_10 | major head protein | head and packaging | 1 | 4638 | 5609 |
| YP_009150018.1 | NC_027359_p13 | hypothetical protein | phrog_3166 | unknown function | unknown function | 1 | 8248 | 8535 |
| YP_009150025.1 | NC_027359_p20 | endolysin | phrog_670 | endolysin | lysis | 1 | 15414 | 16271 |
| YP_009150008.1 | NC_027359_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 1886 | 3211 |
| YP_009150016.1 | NC_027359_p11 | major tail protein | phrog_117 | major tail protein | tail | 1 | 7180 | 7824 |
| YP_009150045.1 | NC_027359_p40 | hypothetical protein | phrog_1908 | unknown function | unknown function | -1 | 25295 | 25915 |
| YP_009150047.1 | NC_027359_p42 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26327 | 26635 |
| YP_009150042.1 | NC_027359_p37 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 24378 | 24737 |
| YP_009150013.1 | NC_027359_p8 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 6116 | 6463 |
| YP_009150033.1 | NC_027359_p28 | hypothetical protein | phrog_5969 | unknown function | unknown function | -1 | 19519 | 19764 |
| YP_009150040.1 | NC_027359_p35 | hypothetical protein | phrog_1890 | unknown function | unknown function | -1 | 23036 | 23440 |
| YP_009150006.1 | NC_027359_p1 | excinuclease | phrog_1897 | terminase small subunit | head and packaging | 1 | 47 | 373 |
| YP_009150007.1 | NC_027359_p2 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 378 | 1889 |
| YP_009150050.1 | NC_027359_p45 | hypothetical protein | phrog_8276 | unknown function | unknown function | 1 | 28643 | 28777 |
| YP_009150012.1 | NC_027359_p7 | hypothetical protein | phrog_1290 | head-tail adaptor | connector | 1 | 5626 | 6114 |
| YP_009150046.1 | NC_027359_p41 | hypothetical protein | phrog_7707 | unknown function | unknown function | -1 | 25912 | 26199 |
| YP_009150029.1 | NC_027359_p24 | hypothetical protein | phrog_1947 | unknown function | unknown function | -1 | 17680 | 17955 |