| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_027361 |
Definition |
Propionibacterium phage PHL085N00, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus; unclassified Pahexavirus. |
DB of origin |
REFSEQ |
Length |
29454 |
Host Name |
Propionibacterium acnes |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
44 |
%GC |
53.83 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009150236.1 | NC_027361_p37 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 24677 | 25012 |
| YP_009150238.1 | NC_027361_p39 | hypothetical protein | phrog_1884 | unknown function | unknown function | -1 | 25336 | 25563 |
| YP_009150216.1 | NC_027361_p17 | hypothetical protein | phrog_1910 | lectin | other | 1 | 13421 | 14251 |
| YP_009150239.1 | NC_027361_p40 | hypothetical protein | phrog_1908 | unknown function | unknown function | -1 | 25586 | 26194 |
| YP_009150209.1 | NC_027361_p10 | hypothetical protein | phrog_1892 | minor tail protein | tail | 1 | 6737 | 7108 |
| YP_009150210.1 | NC_027361_p11 | major tail protein | phrog_117 | major tail protein | tail | 1 | 7149 | 7802 |
| YP_009150241.1 | NC_027361_p42 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26585 | 26893 |
| YP_009150214.1 | NC_027361_p15 | minor tail subunit | phrog_106 | minor tail protein | tail | 1 | 11283 | 12242 |
| YP_009150226.1 | NC_027361_p27 | hypothetical protein | phrog_1923 | unknown function | unknown function | -1 | 19324 | 19521 |
| YP_009150237.1 | NC_027361_p38 | hypothetical protein | phrog_1937 | unknown function | unknown function | -1 | 25139 | 25339 |
| YP_009150234.1 | NC_027361_p35 | hypothetical protein | phrog_1890 | unknown function | unknown function | -1 | 23323 | 23733 |
| YP_009150204.1 | NC_027361_p5 | scaffold protein | phrog_1879 | head scaffolding protein | head and packaging | 1 | 4081 | 4632 |
| YP_009150225.1 | NC_027361_p26 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18281 | 19327 |
| YP_009150215.1 | NC_027361_p16 | protease | phrog_110 | minor tail protein | tail | 1 | 12249 | 13406 |
| YP_009150205.1 | NC_027361_p6 | major head protein | phrog_10 | major head protein | head and packaging | 1 | 4639 | 5586 |
| YP_009150219.1 | NC_027361_p20 | endolysin | phrog_670 | endolysin | lysis | 1 | 15384 | 16238 |
| YP_009150229.1 | NC_027361_p30 | DNA primase | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20676 | 21401 |
| YP_009150224.1 | NC_027361_p25 | hypothetical protein | phrog_1340 | unknown function | unknown function | -1 | 17951 | 18271 |
| YP_009150208.1 | NC_027361_p9 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 6462 | 6740 |
| YP_009150218.1 | NC_027361_p19 | collagen-like protein | phrog_1806 | collagen like minor tail | tail | 1 | 14551 | 15342 |
| YP_009150230.1 | NC_027361_p31 | DNA primase | phrog_2304 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 21184 | 21585 |
| YP_009150228.1 | NC_027361_p29 | hypothetical protein | phrog_1881 | unknown function | unknown function | -1 | 20065 | 20631 |
| YP_009150217.1 | NC_027361_p18 | hypothetical protein | phrog_34778 | unknown function | unknown function | 1 | 14417 | 14554 |
| YP_009150213.1 | NC_027361_p14 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 8521 | 11286 |
| YP_009150223.1 | NC_027361_p24 | hypothetical protein | phrog_1947 | unknown function | unknown function | -1 | 17652 | 17936 |
| YP_009150203.1 | NC_027361_p4 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 3215 | 3970 |
| YP_009150207.1 | NC_027361_p8 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 6097 | 6444 |
| YP_009150221.1 | NC_027361_p22 | hypothetical protein | phrog_2092 | unknown function | unknown function | -1 | 16733 | 17245 |
| YP_009150240.1 | NC_027361_p41 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26238 | 26552 |
| YP_009150232.1 | NC_027361_p33 | DNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 21901 | 22764 |
| YP_009150220.1 | NC_027361_p21 | holin | phrog_443 | holin | lysis | 1 | 16251 | 16649 |
| YP_009150242.1 | NC_027361_p43 | hypothetical protein | phrog_5628 | unknown function | unknown function | 1 | 28918 | 29088 |
| YP_009150202.1 | NC_027361_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 1886 | 3211 |
| YP_009150222.1 | NC_027361_p23 | sigma factor | phrog_1729 | unknown function | unknown function | -1 | 17250 | 17648 |
| YP_009150233.1 | NC_027361_p34 | hypothetical protein | phrog_1288 | unknown function | unknown function | -1 | 22813 | 23274 |
| YP_009150235.1 | NC_027361_p36 | exonuclease | phrog_1870 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 23730 | 24677 |
| YP_009150211.1 | NC_027361_p12 | hypothetical protein | phrog_1927 | tail assembly chaperone | tail | 1 | 7831 | 8127 |
| YP_009150212.1 | NC_027361_p13 | hypothetical protein | phrog_3166 | unknown function | unknown function | 1 | 8226 | 8513 |
| YP_009150200.1 | NC_027361_p1 | excinuclease | phrog_1897 | terminase small subunit | head and packaging | 1 | 47 | 373 |
| YP_009150243.1 | NC_027361_p44 | endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 29101 | 29403 |
| YP_009150206.1 | NC_027361_p7 | hypothetical protein | phrog_1290 | head-tail adaptor | connector | 1 | 5616 | 6095 |
| YP_009150201.1 | NC_027361_p2 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 378 | 1889 |
| YP_009150231.1 | NC_027361_p32 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 21545 | 21934 |
| YP_009150227.1 | NC_027361_p28 | hypothetical protein | phrog_2548 | unknown function | unknown function | -1 | 19505 | 20068 |