| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_027362 |
Definition |
Propionibacterium phage PHL116M00, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus. |
DB of origin |
REFSEQ |
Length |
29394 |
Host Name |
Propionibacterium acnes |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
46 |
%GC |
53.95 |
Number of singletons |
2 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009150277.1 | NC_027362_p34 | hypothetical protein | phrog_1288 | unknown function | unknown function | -1 | 22797 | 23261 |
| YP_009150266.1 | NC_027362_p23 | sigma factor | phrog_1729 | unknown function | unknown function | -1 | 17262 | 17660 |
| YP_009150254.1 | NC_027362_p11 | major tail protein | phrog_117 | major tail protein | tail | 1 | 7166 | 7801 |
| YP_009150280.1 | NC_027362_p37 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 24656 | 25015 |
| YP_009150244.1 | NC_027362_p1 | excinuclease | phrog_1897 | terminase small subunit | head and packaging | 1 | 47 | 373 |
| YP_009150261.1 | NC_027362_p18 | hypothetical protein | phrog_1958 | minor tail protein | tail | 1 | 14289 | 14555 |
| YP_009150283.1 | NC_027362_p40 | hypothetical protein | phrog_1908 | unknown function | unknown function | -1 | 25571 | 26104 |
| YP_009150273.1 | NC_027362_p30 | DNA primase | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20668 | 21339 |
| YP_009150264.1 | NC_027362_p21 | holin | phrog_443 | holin | lysis | 1 | 16279 | 16677 |
| YP_009150262.1 | NC_027362_p19 | collagen-like protein | phrog_1806 | collagen like minor tail | tail | 1 | 14558 | 15364 |
| YP_009150282.1 | NC_027362_p39 | hypothetical protein | phrog_1884 | unknown function | unknown function | -1 | 25321 | 25548 |
| YP_009150275.1 | NC_027362_p32 | hypothetical protein | phrog_11072 | unknown function | unknown function | -1 | 21537 | 21734 |
| YP_009150276.1 | NC_027362_p33 | DNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 21803 | 22756 |
| YP_009150274.1 | NC_027362_p31 | DNA primase | phrog_2304 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 21176 | 21577 |
| YP_009150260.1 | NC_027362_p17 | hypothetical protein | phrog_1910 | lectin | other | 1 | 13417 | 14247 |
| YP_009150252.1 | NC_027362_p9 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 6459 | 6749 |
| YP_009150272.1 | NC_027362_p29 | hypothetical protein | phrog_1881 | unknown function | unknown function | -1 | 20050 | 20616 |
| YP_009150255.1 | NC_027362_p12 | hypothetical protein | phrog_1927 | tail assembly chaperone | tail | 1 | 7829 | 8125 |
| YP_009150250.1 | NC_027362_p7 | hypothetical protein | phrog_1290 | head-tail adaptor | connector | 1 | 5623 | 6102 |
| YP_009150267.1 | NC_027362_p24 | hypothetical protein | phrog_1947 | unknown function | unknown function | -1 | 17664 | 17939 |
| YP_009150258.1 | NC_027362_p15 | minor tail subunit | phrog_106 | minor tail protein | tail | 1 | 11300 | 12247 |
| YP_009150270.1 | NC_027362_p27 | hypothetical protein | phrog_1923 | unknown function | unknown function | -1 | 19318 | 19512 |
| YP_009150286.1 | NC_027362_p43 | hypothetical protein | singleton | unknown function | unknown function | -1 | 27033 | 27176 |
| YP_009150288.1 | NC_027362_p45 | hypothetical protein | phrog_7333 | unknown function | unknown function | 1 | 28893 | 29030 |
| YP_009150263.1 | NC_027362_p20 | endolysin | phrog_670 | endolysin | lysis | 1 | 15418 | 16272 |
| YP_009150289.1 | NC_027362_p46 | endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 29043 | 29345 |
| YP_009150265.1 | NC_027362_p22 | hypothetical protein | phrog_2092 | unknown function | unknown function | -1 | 16763 | 17257 |
| YP_009150268.1 | NC_027362_p25 | hypothetical protein | phrog_1340 | unknown function | unknown function | -1 | 17951 | 18271 |
| YP_009150247.1 | NC_027362_p4 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 3218 | 3973 |
| YP_009150278.1 | NC_027362_p35 | hypothetical protein | phrog_1890 | unknown function | unknown function | -1 | 23302 | 23712 |
| YP_009150259.1 | NC_027362_p16 | protease | phrog_110 | minor tail protein | tail | 1 | 12255 | 13412 |
| YP_009150251.1 | NC_027362_p8 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 6104 | 6451 |
| YP_009150271.1 | NC_027362_p28 | hypothetical protein | phrog_2548 | unknown function | unknown function | -1 | 19496 | 20053 |
| YP_009150257.1 | NC_027362_p14 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 8519 | 11284 |
| YP_009150249.1 | NC_027362_p6 | major head protein | phrog_10 | major head protein | head and packaging | 1 | 4650 | 5597 |
| YP_009150245.1 | NC_027362_p2 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 378 | 1889 |
| YP_009150287.1 | NC_027362_p44 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28577 | 28645 |
| YP_009150279.1 | NC_027362_p36 | exonuclease | phrog_1870 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 23709 | 24656 |
| YP_009150269.1 | NC_027362_p26 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18281 | 19321 |
| YP_009150281.1 | NC_027362_p38 | hypothetical protein | phrog_1937 | unknown function | unknown function | -1 | 25121 | 25324 |
| YP_009150246.1 | NC_027362_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 1886 | 3211 |
| YP_009150253.1 | NC_027362_p10 | hypothetical protein | phrog_1892 | minor tail protein | tail | 1 | 6746 | 7117 |
| YP_009150256.1 | NC_027362_p13 | hypothetical protein | phrog_3166 | unknown function | unknown function | 1 | 8224 | 8511 |
| YP_009150285.1 | NC_027362_p42 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26572 | 27012 |
| YP_009150284.1 | NC_027362_p41 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26225 | 26539 |
| YP_009150248.1 | NC_027362_p5 | scaffold protein | phrog_1879 | head scaffolding protein | head and packaging | 1 | 4083 | 4643 |