| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_027365 |
Definition |
Mycobacterium virus Fionnbarth, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus. |
DB of origin |
REFSEQ |
Length |
58076 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
94 |
%GC |
68 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009150881.1 | NC_027365_p16 | hypothetical protein | phrog_763 | head-tail adaptor | connector | 1 | 10611 | 10967 |
| YP_009150929.1 | NC_027365_p64 | hypothetical protein | phrog_10545 | unknown function | unknown function | 1 | 42022 | 42165 |
| YP_009150880.1 | NC_027365_p15 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 10234 | 10608 |
| YP_009150951.1 | NC_027365_p86 | pyrophosphatase | phrog_3963 | unknown function | unknown function | 1 | 53503 | 53811 |
| YP_009150945.1 | NC_027365_p80 | hypothetical protein | phrog_1006 | unknown function | unknown function | 1 | 51473 | 52057 |
| YP_009150914.1 | NC_027365_p49 | hypothetical protein | phrog_14099 | unknown function | unknown function | 1 | 36755 | 37015 |
| YP_009150923.1 | NC_027365_p58 | hypothetical protein | phrog_353 | toxin | moron, auxiliary metabolic gene and host takeover | 1 | 39733 | 39954 |
| YP_009150874.1 | NC_027365_p9 | terminase | phrog_2 | terminase large subunit | head and packaging | 1 | 2465 | 3910 |
| YP_009150954.1 | NC_027365_p89 | hypothetical protein | phrog_5436 | unknown function | unknown function | 1 | 54410 | 55210 |
| YP_009150895.1 | NC_027365_p30 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 25612 | 25989 |
| YP_009150866.1 | NC_027365_p1 | hypothetical protein | phrog_5391 | unknown function | unknown function | 1 | 117 | 254 |
| YP_009150901.1 | NC_027365_p36 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 29433 | 30623 |
| YP_009150872.1 | NC_027365_p7 | hypothetical protein | phrog_2622 | unknown function | unknown function | 1 | 1985 | 2224 |
| YP_009150946.1 | NC_027365_p81 | hypothetical protein | phrog_14347 | unknown function | unknown function | 1 | 52167 | 52277 |
| YP_009150893.1 | NC_027365_p28 | minor tail | phrog_746 | minor tail protein | tail | 1 | 22273 | 24582 |
| YP_009150921.1 | NC_027365_p56 | hypothetical protein | phrog_474 | phosphofructokinase | other | 1 | 39135 | 39530 |
| YP_009150907.1 | NC_027365_p42 | 2-dehydro-3-deoxy-galactarate aldolase | phrog_8324 | unknown function | unknown function | 1 | 32392 | 32823 |
| YP_009150926.1 | NC_027365_p61 | DNA polymerase | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 40402 | 40998 |
| YP_009150934.1 | NC_027365_p69 | NrdH-like glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 43618 | 43881 |
| YP_009150957.1 | NC_027365_p92 | hypothetical protein | phrog_14339 | unknown function | unknown function | 1 | 56947 | 57159 |
| YP_009150910.1 | NC_027365_p45 | hypothetical protein | phrog_950 | unknown function | unknown function | -1 | 34927 | 35745 |
| YP_009150879.1 | NC_027365_p14 | major capsid | phrog_10 | major head protein | head and packaging | 1 | 9165 | 10094 |
| YP_009150933.1 | NC_027365_p68 | hypothetical protein | phrog_1911 | unknown function | unknown function | 1 | 42842 | 43510 |
| YP_009150869.1 | NC_027365_p4 | hypothetical protein | phrog_5972 | unknown function | unknown function | 1 | 645 | 914 |
| YP_009150903.1 | NC_027365_p38 | hypothetical protein | phrog_2311 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 31057 | 31383 |
| YP_009150918.1 | NC_027365_p53 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 37850 | 38203 |
| YP_009150878.1 | NC_027365_p13 | scaffolding | phrog_1793 | head scaffolding protein | head and packaging | 1 | 8534 | 9106 |
| YP_009150896.1 | NC_027365_p31 | lysin A | phrog_317 | endolysin | lysis | 1 | 26020 | 27630 |
| YP_009150883.1 | NC_027365_p18 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 11211 | 11636 |
| YP_009150877.1 | NC_027365_p12 | hypothetical protein | phrog_1757 | unknown function | unknown function | 1 | 8245 | 8442 |
| YP_009150925.1 | NC_027365_p60 | hypothetical protein | phrog_13940 | unknown function | unknown function | 1 | 40322 | 40405 |
| YP_009150882.1 | NC_027365_p17 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 10954 | 11214 |
| YP_009150935.1 | NC_027365_p70 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 43878 | 44723 |
| YP_009150890.1 | NC_027365_p25 | hypothetical protein | phrog_1697 | minor tail protein | tail | 1 | 20411 | 20929 |
| YP_009150931.1 | NC_027365_p66 | hypothetical protein | phrog_12856 | unknown function | unknown function | 1 | 42377 | 42658 |
| YP_009150888.1 | NC_027365_p23 | minor tail | phrog_106 | minor tail protein | tail | 1 | 17490 | 18623 |
| YP_009150919.1 | NC_027365_p54 | hypothetical protein | phrog_1622 | unknown function | unknown function | 1 | 38203 | 38442 |
| YP_009150909.1 | NC_027365_p44 | integrase, Y-int | phrog_1 | integrase | integration and excision | 1 | 33681 | 34946 |
| YP_009150889.1 | NC_027365_p24 | minor tail | phrog_110 | minor tail protein | tail | 1 | 18623 | 20410 |
| YP_009150904.1 | NC_027365_p39 | hypothetical protein | phrog_1338 | unknown function | unknown function | 1 | 31415 | 31714 |
| YP_009150944.1 | NC_027365_p79 | hypothetical protein | phrog_2493 | unknown function | unknown function | 1 | 50934 | 51437 |
| YP_009150950.1 | NC_027365_p85 | hypothetical protein | phrog_7647 | unknown function | unknown function | 1 | 53241 | 53474 |
| YP_009150924.1 | NC_027365_p59 | hypothetical protein | phrog_1956 | unknown function | unknown function | 1 | 40047 | 40322 |
| YP_009150892.1 | NC_027365_p27 | hypothetical protein | phrog_1736 | minor tail protein | tail | 1 | 22035 | 22280 |
| YP_009150915.1 | NC_027365_p50 | hypothetical protein | phrog_2654 | unknown function | unknown function | 1 | 37059 | 37241 |
| YP_009150955.1 | NC_027365_p90 | hypothetical protein | phrog_2433 | unknown function | unknown function | 1 | 55275 | 55982 |
| YP_009150916.1 | NC_027365_p51 | hypothetical protein | phrog_11977 | unknown function | unknown function | 1 | 37238 | 37549 |
| YP_009150908.1 | NC_027365_p43 | hypothetical protein | phrog_806 | unknown function | unknown function | -1 | 32922 | 33443 |
| YP_009150920.1 | NC_027365_p55 | hypothetical protein | phrog_2286 | unknown function | unknown function | 1 | 38446 | 39138 |
| YP_009150956.1 | NC_027365_p91 | hypothetical protein | phrog_4095 | unknown function | unknown function | 1 | 56069 | 56776 |
| YP_009150928.1 | NC_027365_p63 | exonuclease | phrog_1674 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 41159 | 42022 |
| YP_009150905.1 | NC_027365_p40 | hypothetical protein | phrog_7217 | unknown function | unknown function | 1 | 31711 | 32013 |
| YP_009150953.1 | NC_027365_p88 | hypothetical protein | phrog_11871 | unknown function | unknown function | 1 | 53978 | 54331 |
| YP_009150871.1 | NC_027365_p6 | hypothetical protein | phrog_7999 | unknown function | unknown function | 1 | 1273 | 1959 |
| YP_009150943.1 | NC_027365_p78 | hypothetical protein | phrog_12502 | unknown function | unknown function | 1 | 50731 | 50937 |
| YP_009150886.1 | NC_027365_p21 | tail assembly chaperone | phrog_1861 | unknown function | unknown function | 1 | 12431 | 12880 |
| YP_009150906.1 | NC_027365_p41 | hypothetical protein | phrog_3851 | unknown function | unknown function | 1 | 32006 | 32395 |
| YP_009150940.1 | NC_027365_p75 | HNH endonuclease | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 48594 | 49094 |
| YP_009150876.1 | NC_027365_p11 | capsid maturation protease | phrog_1752 | head maturation protease | head and packaging | 1 | 5489 | 8248 |
| YP_009150948.1 | NC_027365_p83 | hypothetical protein | phrog_16540 | unknown function | unknown function | 1 | 52594 | 52971 |
| YP_009150952.1 | NC_027365_p87 | hypothetical protein | phrog_12916 | unknown function | unknown function | 1 | 53826 | 53981 |
| YP_009150902.1 | NC_027365_p37 | hypothetical protein | phrog_1042 | unknown function | unknown function | 1 | 30626 | 30907 |
| YP_009150939.1 | NC_027365_p74 | hypothetical protein | phrog_10480 | unknown function | unknown function | 1 | 48232 | 48606 |
| YP_009150884.1 | NC_027365_p19 | major tail subunit | phrog_117 | major tail protein | tail | 1 | 11717 | 12328 |
| YP_009150900.1 | NC_027365_p35 | hypothetical protein | phrog_1738 | unknown function | unknown function | 1 | 29186 | 29446 |
| YP_009150927.1 | NC_027365_p62 | hypothetical protein | phrog_1498 | unknown function | unknown function | 1 | 40998 | 41162 |
| YP_009150870.1 | NC_027365_p5 | hypothetical protein | phrog_1454 | unknown function | unknown function | 1 | 911 | 1273 |
| YP_009150891.1 | NC_027365_p26 | minor tail | phrog_1565 | minor tail protein | tail | 1 | 20926 | 22023 |
| YP_009150947.1 | NC_027365_p82 | hypothetical protein | phrog_2974 | unknown function | unknown function | 1 | 52307 | 52576 |
| YP_009150930.1 | NC_027365_p65 | hypothetical protein | phrog_1581 | unknown function | unknown function | 1 | 42162 | 42380 |
| YP_009150898.1 | NC_027365_p33 | holin | phrog_565 | holin | lysis | 1 | 28459 | 28857 |
| YP_009150894.1 | NC_027365_p29 | hypothetical protein | phrog_416 | minor tail protein | tail | 1 | 24586 | 25590 |
| YP_009150885.1 | NC_027365_p20 | tail assembly chaperone | phrog_1326 | tail assembly chaperone | tail | 1 | 12431 | 13311 |
| YP_009150897.1 | NC_027365_p32 | lysin B | phrog_102 | endolysin | lysis | 1 | 27630 | 28421 |
| YP_009150913.1 | NC_027365_p48 | Xis | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 36562 | 36750 |
| YP_009150932.1 | NC_027365_p67 | hypothetical protein | phrog_2388 | unknown function | unknown function | 1 | 42655 | 42771 |
| YP_009150949.1 | NC_027365_p84 | hypothetical protein | phrog_7536 | unknown function | unknown function | 1 | 52968 | 53138 |
| YP_009150875.1 | NC_027365_p10 | portal | phrog_104 | portal protein | head and packaging | 1 | 3922 | 5508 |
| YP_009150959.1 | NC_027365_p94 | methyltransferase | phrog_2675 | DNA methyltransferase | other | 1 | 57468 | 58043 |
| YP_009150899.1 | NC_027365_p34 | hypothetical protein | phrog_3413 | unknown function | unknown function | 1 | 28854 | 29189 |
| YP_009150868.1 | NC_027365_p3 | hypothetical protein | phrog_542 | unknown function | unknown function | 1 | 478 | 645 |
| YP_009150941.1 | NC_027365_p76 | hypothetical protein | phrog_12358 | unknown function | unknown function | 1 | 49091 | 49831 |
| YP_009150887.1 | NC_027365_p22 | tapemeasure | phrog_971 | endolysin | lysis | 1 | 13314 | 17489 |
| YP_009150911.1 | NC_027365_p46 | immunity repressor | phrog_1746 | transcriptional repressor | transcription regulation | -1 | 35830 | 36189 |
| YP_009150937.1 | NC_027365_p72 | hypothetical protein | phrog_1571 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 44883 | 45263 |
| YP_009150912.1 | NC_027365_p47 | hypothetical protein | phrog_1702 | transcriptional repressor | transcription regulation | 1 | 36320 | 36565 |
| YP_009150958.1 | NC_027365_p93 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 57163 | 57468 |
| YP_009150917.1 | NC_027365_p52 | endonuclease | phrog_12473 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 37546 | 37857 |
| YP_009150922.1 | NC_027365_p57 | hypothetical protein | phrog_14062 | unknown function | unknown function | 1 | 39527 | 39736 |
| YP_009150873.1 | NC_027365_p8 | hypothetical protein | phrog_1459 | terminase small subunit | head and packaging | 1 | 2221 | 2493 |
| YP_009150938.1 | NC_027365_p73 | DNA primase | phrog_2478 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 45355 | 47976 |
| YP_009150936.1 | NC_027365_p71 | hypothetical protein | phrog_12554 | unknown function | unknown function | 1 | 44723 | 44893 |
| YP_009150867.1 | NC_027365_p2 | hypothetical protein | phrog_2074 | unknown function | unknown function | 1 | 251 | 481 |
| YP_009150942.1 | NC_027365_p77 | hypothetical protein | phrog_908 | unknown function | unknown function | 1 | 49856 | 50734 |