| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_027370 |
Definition |
Propionibacterium phage PHL179M00, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus. |
DB of origin |
REFSEQ |
Length |
29428 |
Host Name |
Propionibacterium acnes |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
45 |
%GC |
53.92 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009151395.1 | NC_027370_p17 | hypothetical protein | phrog_1910 | lectin | other | 1 | 13417 | 14247 |
| YP_009151396.1 | NC_027370_p18 | hypothetical protein | phrog_1958 | minor tail protein | tail | 1 | 14289 | 14555 |
| YP_009151397.1 | NC_027370_p19 | collagen-like protein | phrog_1806 | collagen like minor tail | tail | 1 | 14558 | 15355 |
| YP_009151385.1 | NC_027370_p7 | hypothetical protein | phrog_1290 | head-tail adaptor | connector | 1 | 5633 | 6094 |
| YP_009151402.1 | NC_027370_p24 | hypothetical protein | phrog_1947 | unknown function | unknown function | -1 | 17636 | 17920 |
| YP_009151392.1 | NC_027370_p14 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 8517 | 11282 |
| YP_009151413.1 | NC_027370_p35 | hypothetical protein | phrog_1890 | unknown function | unknown function | -1 | 23308 | 23718 |
| YP_009151384.1 | NC_027370_p6 | major head protein | phrog_10 | major head protein | head and packaging | 1 | 4640 | 5587 |
| YP_009151387.1 | NC_027370_p9 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 6450 | 6740 |
| YP_009151411.1 | NC_027370_p33 | DNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 21885 | 22748 |
| YP_009151404.1 | NC_027370_p26 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18263 | 19309 |
| YP_009151401.1 | NC_027370_p23 | sigma factor | phrog_1729 | unknown function | unknown function | -1 | 17252 | 17632 |
| YP_009151407.1 | NC_027370_p29 | hypothetical protein | phrog_1881 | unknown function | unknown function | -1 | 20047 | 20610 |
| YP_009151419.1 | NC_027370_p41 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26225 | 26536 |
| YP_009151417.1 | NC_027370_p39 | hypothetical protein | phrog_1884 | unknown function | unknown function | -1 | 25321 | 25548 |
| YP_009151418.1 | NC_027370_p40 | hypothetical protein | phrog_1908 | unknown function | unknown function | -1 | 25571 | 26155 |
| YP_009151389.1 | NC_027370_p11 | major tail protein | phrog_117 | major tail protein | tail | 1 | 7164 | 7799 |
| YP_009151408.1 | NC_027370_p30 | DNA primase | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20654 | 21325 |
| YP_009151390.1 | NC_027370_p12 | hypothetical protein | phrog_1927 | tail assembly chaperone | tail | 1 | 7827 | 8123 |
| YP_009151415.1 | NC_027370_p37 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 24662 | 25015 |
| YP_009151416.1 | NC_027370_p38 | hypothetical protein | phrog_1937 | unknown function | unknown function | -1 | 25121 | 25324 |
| YP_009151409.1 | NC_027370_p31 | DNA primase | phrog_2304 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 21162 | 21563 |
| YP_009151399.1 | NC_027370_p21 | holin | phrog_443 | holin | lysis | 1 | 16273 | 16674 |
| YP_009151400.1 | NC_027370_p22 | hypothetical protein | phrog_2092 | unknown function | unknown function | -1 | 16758 | 17246 |
| YP_009151405.1 | NC_027370_p27 | hypothetical protein | phrog_1923 | unknown function | unknown function | -1 | 19306 | 19506 |
| YP_009151393.1 | NC_027370_p15 | minor tail subunit | phrog_106 | minor tail protein | tail | 1 | 11421 | 12245 |
| YP_009151420.1 | NC_027370_p42 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26576 | 26986 |
| YP_009151379.1 | NC_027370_p1 | excinuclease | phrog_1897 | terminase small subunit | head and packaging | 1 | 2 | 373 |
| YP_009151403.1 | NC_027370_p25 | hypothetical protein | phrog_1340 | unknown function | unknown function | -1 | 17933 | 18253 |
| YP_009151421.1 | NC_027370_p43 | hypothetical protein | phrog_8276 | unknown function | unknown function | 1 | 28561 | 28716 |
| YP_009151381.1 | NC_027370_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 1881 | 3206 |
| YP_009151380.1 | NC_027370_p2 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 373 | 1884 |
| YP_009151388.1 | NC_027370_p10 | hypothetical protein | phrog_1892 | minor tail protein | tail | 1 | 6737 | 7108 |
| YP_009151414.1 | NC_027370_p36 | exonuclease | phrog_1870 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 23715 | 24662 |
| YP_009151422.1 | NC_027370_p44 | hypothetical protein | phrog_7333 | unknown function | unknown function | 1 | 28879 | 29028 |
| YP_009151398.1 | NC_027370_p20 | endolysin | phrog_670 | endolysin | lysis | 1 | 15370 | 16260 |
| YP_009151406.1 | NC_027370_p28 | hypothetical protein | phrog_2548 | unknown function | unknown function | -1 | 19490 | 20050 |
| YP_009151423.1 | NC_027370_p45 | endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 29076 | 29378 |
| YP_009151410.1 | NC_027370_p32 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 21523 | 21879 |
| YP_009151394.1 | NC_027370_p16 | protease | phrog_110 | minor tail protein | tail | 1 | 12303 | 13409 |
| YP_009151412.1 | NC_027370_p34 | hypothetical protein | phrog_1288 | unknown function | unknown function | -1 | 22789 | 23256 |
| YP_009151391.1 | NC_027370_p13 | hypothetical protein | phrog_3166 | unknown function | unknown function | 1 | 8222 | 8509 |
| YP_009151383.1 | NC_027370_p5 | scaffold protein | phrog_1879 | head scaffolding protein | head and packaging | 1 | 4079 | 4633 |
| YP_009151386.1 | NC_027370_p8 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 6096 | 6443 |
| YP_009151382.1 | NC_027370_p4 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 3213 | 3968 |