Genomic map of Propionibacterium phage Pacnes 2012-15 (NC_027371)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_027371
Definition
Propionibacterium phage Pacnes 2012-15, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus.
DB of origin
REFSEQ
Length
29741
Host Name
Propionibacterium acnes
Host domain
Bacteria
Is prophage?
undef
Number of proteins
45
%GC
54.42
Number of singletons
2
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009151450.1 NC_027371_p27 collagen-like surface protein phrog_1806 collagen like minor tail tail -1 14277 15119
YP_009151439.1 NC_027371_p16 hypothetical protein phrog_849 DNA primase DNA, RNA and nucleotide metabolism 1 8588 9259
YP_009151461.1 NC_027371_p38 hypothetical protein phrog_501 head closure Hc1 connector -1 23248 23595
YP_009151438.1 NC_027371_p15 hypothetical protein phrog_11072 unknown function unknown function 1 8235 8390
YP_009151467.1 NC_027371_p44 hypothetical protein phrog_9 terminase large subunit head and packaging -1 27816 29327
YP_009151430.1 NC_027371_p7 hypothetical protein phrog_1884 unknown function unknown function 1 4404 4655
YP_009151442.1 NC_027371_p19 hypothetical protein phrog_1923 unknown function unknown function 1 10115 10300
YP_009151448.1 NC_027371_p25 hypothetical protein phrog_443 holin lysis -1 12953 13354
YP_009151432.1 NC_027371_p9 hypothetical protein singleton unknown function unknown function -1 4809 4940
YP_009151457.1 NC_027371_p34 hypothetical protein phrog_1927 tail assembly chaperone tail -1 21567 21818
YP_009151465.1 NC_027371_p42 hypothetical protein phrog_193 head maturation protease head and packaging -1 25735 26490
YP_009151424.1 NC_027371_p1 HNH endonuclease family protein phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism -1 52 354
YP_009151441.1 NC_027371_p18 hypothetical protein phrog_5969 unknown function unknown function 1 9916 10131
YP_009151428.1 NC_027371_p5 hypothetical protein phrog_7707 unknown function unknown function 1 3588 3737
YP_009151434.1 NC_027371_p11 hypothetical protein phrog_1870 exonuclease DNA, RNA and nucleotide metabolism 1 5298 6218
YP_009151443.1 NC_027371_p20 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 10297 11340
YP_009151425.1 NC_027371_p2 hypothetical protein phrog_919 unknown function unknown function 1 2692 3000
YP_009151440.1 NC_027371_p17 hypothetical protein phrog_1881 unknown function unknown function 1 9304 9861
YP_009151445.1 NC_027371_p22 hypothetical protein phrog_1947 unknown function unknown function 1 11684 11968
YP_009151435.1 NC_027371_p12 hypothetical protein phrog_1890 unknown function unknown function 1 6221 6625
YP_009151449.1 NC_027371_p26 negative regulator of beta-lactamase expression phrog_670 endolysin lysis -1 13364 14221
YP_009151429.1 NC_027371_p6 hypothetical protein phrog_1908 unknown function unknown function 1 3855 4394
YP_009151453.1 NC_027371_p30 hypothetical protein phrog_110 minor tail protein tail -1 16278 17435
YP_009151433.1 NC_027371_p10 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 4939 5298
YP_009151427.1 NC_027371_p4 hypothetical protein singleton unknown function unknown function -1 3416 3568
YP_009151466.1 NC_027371_p43 capsid and scaffold protein phrog_104 portal protein head and packaging -1 26494 27819
YP_009151436.1 NC_027371_p13 hypothetical protein phrog_1288 unknown function unknown function 1 6665 7129
YP_009151460.1 NC_027371_p37 hypothetical protein phrog_387 neck protein connector -1 22951 23241
YP_009151463.1 NC_027371_p40 major capsid protein phrog_10 major head protein head and packaging -1 24102 25073
YP_009151446.1 NC_027371_p23 hypothetical protein phrog_1729 unknown function unknown function 1 11972 12364
YP_009151431.1 NC_027371_p8 hypothetical protein phrog_1937 unknown function unknown function 1 4627 4833
YP_009151451.1 NC_027371_p28 hypothetical protein phrog_1958 minor tail protein tail -1 15123 15386
YP_009151458.1 NC_027371_p35 hypothetical protein phrog_117 major tail protein tail -1 21890 22522
YP_009151437.1 NC_027371_p14 hypothetical protein phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 7294 8124
YP_009151426.1 NC_027371_p3 hypothetical protein phrog_919 unknown function unknown function 1 3049 3357
YP_009151464.1 NC_027371_p41 capsid and scaffold protein phrog_1879 head scaffolding protein head and packaging -1 25080 25631
YP_009151455.1 NC_027371_p32 capsid and scaffold protein phrog_58 tail length tape measure protein tail -1 18408 21173
YP_009151454.1 NC_027371_p31 hypothetical protein phrog_106 minor tail protein tail -1 17443 18390
YP_009151452.1 NC_027371_p29 hypothetical protein phrog_1910 lectin other -1 15443 16261
YP_009151462.1 NC_027371_p39 hypothetical protein phrog_1290 head-tail adaptor connector -1 23597 24076
YP_009151468.1 NC_027371_p45 hypothetical protein phrog_1897 terminase small subunit head and packaging -1 29332 29694
YP_009151447.1 NC_027371_p24 hypothetical protein phrog_2092 unknown function unknown function 1 12369 12860
YP_009151459.1 NC_027371_p36 hypothetical protein phrog_1892 minor tail protein tail -1 22583 22915
YP_009151456.1 NC_027371_p33 hypothetical protein phrog_3166 unknown function unknown function -1 21181 21468
YP_009151444.1 NC_027371_p21 hypothetical protein phrog_1340 unknown function unknown function 1 11351 11671