| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_027373 |
Definition |
Propionibacterium phage PHL030N00, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus; unclassified Pahexavirus. |
DB of origin |
REFSEQ |
Length |
29423 |
Host Name |
Propionibacterium acnes |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
45 |
%GC |
53.91 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009151554.1 | NC_027373_p36 | exonuclease | phrog_1870 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 23655 | 24602 |
| YP_009151522.1 | NC_027373_p4 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 3212 | 3967 |
| YP_009151545.1 | NC_027373_p27 | hypothetical protein | phrog_1923 | unknown function | unknown function | -1 | 19261 | 19452 |
| YP_009151546.1 | NC_027373_p28 | hypothetical protein | phrog_2548 | unknown function | unknown function | -1 | 19436 | 19996 |
| YP_009151528.1 | NC_027373_p10 | hypothetical protein | phrog_1892 | minor tail protein | tail | 1 | 6734 | 7105 |
| YP_009151549.1 | NC_027373_p31 | DNA primase | phrog_2304 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 21108 | 21509 |
| YP_009151540.1 | NC_027373_p22 | hypothetical protein | phrog_2092 | unknown function | unknown function | -1 | 16719 | 17207 |
| YP_009151559.1 | NC_027373_p41 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26155 | 26466 |
| YP_009151551.1 | NC_027373_p33 | DNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 21829 | 22692 |
| YP_009151542.1 | NC_027373_p24 | hypothetical protein | phrog_1947 | unknown function | unknown function | -1 | 17597 | 17881 |
| YP_009151560.1 | NC_027373_p42 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26499 | 26894 |
| YP_009151519.1 | NC_027373_p1 | excinuclease | phrog_1897 | terminase small subunit | head and packaging | 1 | 124 | 372 |
| YP_009151558.1 | NC_027373_p40 | hypothetical protein | phrog_1908 | unknown function | unknown function | -1 | 25495 | 26121 |
| YP_009151552.1 | NC_027373_p34 | hypothetical protein | phrog_1288 | unknown function | unknown function | -1 | 22734 | 23195 |
| YP_009151562.1 | NC_027373_p44 | hypothetical protein | phrog_7333 | unknown function | unknown function | 1 | 28872 | 29069 |
| YP_009151523.1 | NC_027373_p5 | scaffold protein | phrog_1879 | head scaffolding protein | head and packaging | 1 | 4078 | 4632 |
| YP_009151543.1 | NC_027373_p25 | hypothetical protein | phrog_1340 | unknown function | unknown function | -1 | 17894 | 18214 |
| YP_009151531.1 | NC_027373_p13 | hypothetical protein | phrog_3166 | unknown function | unknown function | 1 | 8203 | 8490 |
| YP_009151530.1 | NC_027373_p12 | hypothetical protein | phrog_1927 | tail assembly chaperone | tail | 1 | 7808 | 8104 |
| YP_009151557.1 | NC_027373_p39 | hypothetical protein | phrog_1884 | unknown function | unknown function | -1 | 25258 | 25485 |
| YP_009151521.1 | NC_027373_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 1880 | 3205 |
| YP_009151534.1 | NC_027373_p16 | protease | phrog_110 | minor tail protein | tail | 1 | 12228 | 13385 |
| YP_009151547.1 | NC_027373_p29 | hypothetical protein | phrog_1881 | unknown function | unknown function | -1 | 19993 | 20556 |
| YP_009151526.1 | NC_027373_p8 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 6093 | 6440 |
| YP_009151535.1 | NC_027373_p17 | hypothetical protein | phrog_1910 | lectin | other | 1 | 13405 | 14223 |
| YP_009151538.1 | NC_027373_p20 | endolysin | phrog_670 | endolysin | lysis | 1 | 15375 | 16232 |
| YP_009151553.1 | NC_027373_p35 | hypothetical protein | phrog_1890 | unknown function | unknown function | -1 | 23248 | 23658 |
| YP_009151544.1 | NC_027373_p26 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18224 | 19264 |
| YP_009151556.1 | NC_027373_p38 | hypothetical protein | phrog_1937 | unknown function | unknown function | -1 | 25061 | 25261 |
| YP_009151539.1 | NC_027373_p21 | holin | phrog_443 | holin | lysis | 1 | 16239 | 16634 |
| YP_009151525.1 | NC_027373_p7 | hypothetical protein | phrog_1290 | head-tail adaptor | connector | 1 | 5630 | 6091 |
| YP_009151555.1 | NC_027373_p37 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 24602 | 24955 |
| YP_009151520.1 | NC_027373_p2 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 372 | 1883 |
| YP_009151550.1 | NC_027373_p32 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 21469 | 21825 |
| YP_009151532.1 | NC_027373_p14 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 8498 | 11263 |
| YP_009151537.1 | NC_027373_p19 | collagen-like protein | phrog_1806 | collagen like minor tail | tail | 1 | 14534 | 15322 |
| YP_009151527.1 | NC_027373_p9 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 6447 | 6737 |
| YP_009151529.1 | NC_027373_p11 | major tail protein | phrog_117 | major tail protein | tail | 1 | 7158 | 7781 |
| YP_009151541.1 | NC_027373_p23 | sigma factor | phrog_1729 | unknown function | unknown function | -1 | 17213 | 17593 |
| YP_009151524.1 | NC_027373_p6 | major head protein | phrog_10 | major head protein | head and packaging | 1 | 4639 | 5586 |
| YP_009151561.1 | NC_027373_p43 | hypothetical protein | phrog_8276 | unknown function | unknown function | 1 | 28568 | 28696 |
| YP_009151533.1 | NC_027373_p15 | minor tail subunit | phrog_106 | minor tail protein | tail | 1 | 11330 | 12220 |
| YP_009151548.1 | NC_027373_p30 | DNA primase | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20600 | 21271 |
| YP_009151563.1 | NC_027373_p45 | endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 29069 | 29371 |
| YP_009151536.1 | NC_027373_p18 | hypothetical protein | phrog_1958 | minor tail protein | tail | 1 | 14265 | 14537 |