Genomic map of Pseudomonas phage vB_PaeP_PPA-ABTNL (NC_027375)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_027375
Definition
Pseudomonas phage vB_PaeP_PPA-ABTNL, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Krylovirinae; Phikmvvirus; Pseudomonas virus ABTNL.
DB of origin
REFSEQ
Length
43227
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
54
%GC
62.44
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009151806.1 NC_027375_p6 hypothetical protein phrog_6951 unknown function unknown function 1 3180 3548
YP_009151854.1 NC_027375_p54 minor structural protein phrog_7171 minor head protein head and packaging 1 42428 42622
YP_009151809.1 NC_027375_p9 hypothetical protein phrog_8496 unknown function unknown function 1 3941 4120
YP_009151848.1 NC_027375_p48 terminase small subunit A phrog_891 terminase small subunit head and packaging 1 38892 39197
YP_009151851.1 NC_027375_p51 endolysin phrog_7 endolysin lysis 1 41205 41687
YP_009151842.1 NC_027375_p42 internal virion protein phrog_2083 internal virion lysozyme motif head and packaging 1 29527 32223
YP_009151852.1 NC_027375_p52 hypothetical protein phrog_214 Rz-like spanin lysis 1 41645 41974
YP_009151819.1 NC_027375_p19 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 8480 9748
YP_009151844.1 NC_027375_p44 tail fiber phrog_6953 tail fiber protein tail 1 36242 36997
YP_009151849.1 NC_027375_p49 terminase large subunit B phrog_38 terminase large subunit head and packaging 1 39206 41011
YP_009151845.1 NC_027375_p45 hypothetical protein phrog_17567 unknown function unknown function 1 36997 37437
YP_009151807.1 NC_027375_p7 hypothetical protein phrog_7027 unknown function unknown function 1 3535 3762
YP_009151810.1 NC_027375_p10 hypothetical protein phrog_4342 unknown function unknown function 1 4120 4413
YP_009151850.1 NC_027375_p50 holin phrog_6597 holin lysis 1 41008 41208
YP_009151820.1 NC_027375_p20 hypothetical protein phrog_1614 nucleotidyltransferase DNA, RNA and nucleotide metabolism 1 9738 10358
YP_009151839.1 NC_027375_p39 tail tubular protein A phrog_446 tail protein tail 1 25945 26499
YP_009151830.1 NC_027375_p30 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 18134 18508
YP_009151837.1 NC_027375_p37 scaffolding protein phrog_1018 head scaffolding protein head and packaging 1 23820 24788
YP_009151822.1 NC_027375_p22 hypothetical protein singleton unknown function unknown function 1 11356 11565
YP_009151853.1 NC_027375_p53 minor structural protein phrog_6908 minor head protein head and packaging 1 42064 42378
YP_009151829.1 NC_027375_p29 hypothetical protein phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 17078 18124
YP_009151821.1 NC_027375_p21 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 10358 11302
YP_009151828.1 NC_027375_p28 endonuclease VII phrog_423 endonuclease VII DNA, RNA and nucleotide metabolism 1 16641 17081
YP_009151833.1 NC_027375_p33 hypothetical protein phrog_6575 unknown function unknown function 1 21334 21558
YP_009151826.1 NC_027375_p26 hypothetical protein phrog_862 unknown function unknown function 1 14661 15710
YP_009151812.1 NC_027375_p12 hypothetical protein phrog_4342 unknown function unknown function 1 4664 4957
YP_009151802.1 NC_027375_p2 hypothetical protein phrog_7124 unknown function unknown function 1 2033 2260
YP_009151804.1 NC_027375_p4 hypothetical protein phrog_18183 unknown function unknown function 1 2875 2979
YP_009151825.1 NC_027375_p25 hypothetical protein phrog_5437 unknown function unknown function 1 14295 14606
YP_009151840.1 NC_027375_p40 tail tubular protein B phrog_457 tail protein tail 1 26502 28982
YP_009151817.1 NC_027375_p17 hypothetical protein phrog_9768 unknown function unknown function 1 7494 7619
YP_009151801.1 NC_027375_p1 hypothetical protein phrog_5722 unknown function unknown function 1 1749 2033
YP_009151808.1 NC_027375_p8 hypothetical protein phrog_21702 unknown function unknown function 1 3828 3944
YP_009151815.1 NC_027375_p15 DNA-binding protein phrog_6982 DNA polymerase DNA, RNA and nucleotide metabolism 1 5883 6692
YP_009151813.1 NC_027375_p13 hypothetical protein phrog_5433 unknown function unknown function 1 5036 5452
YP_009151824.1 NC_027375_p24 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 11875 14298
YP_009151847.1 NC_027375_p47 hypothetical protein phrog_4950 tail fiber protein tail 1 38302 38892
YP_009151835.1 NC_027375_p35 hypothetical protein phrog_3112 virion structural protein head and packaging 1 21997 22272
YP_009151805.1 NC_027375_p5 hypothetical protein phrog_12691 unknown function unknown function 1 2982 3101
YP_009151818.1 NC_027375_p18 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 7687 8511
YP_009151834.1 NC_027375_p34 hypothetical protein phrog_3986 unknown function unknown function 1 21558 22031
YP_009151823.1 NC_027375_p23 hypothetical protein phrog_7292 unknown function unknown function 1 11549 11878
YP_009151816.1 NC_027375_p16 hypothetical protein phrog_2563 unknown function unknown function 1 6962 7501
YP_009151814.1 NC_027375_p14 hypothetical protein phrog_6915 unknown function unknown function 1 5521 5880
YP_009151811.1 NC_027375_p11 hypothetical protein phrog_4955 unknown function unknown function 1 4410 4646
YP_009151803.1 NC_027375_p3 hypothetical protein phrog_1448 unknown function unknown function 1 2270 2809
YP_009151836.1 NC_027375_p36 head-tail connector protein phrog_449 head-tail adaptor connector 1 22284 23816
YP_009151827.1 NC_027375_p27 exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 15710 16651
YP_009151838.1 NC_027375_p38 capsid protein phrog_267 major head protein head and packaging 1 24841 25848
YP_009151841.1 NC_027375_p41 internal virion protein phrog_805 internal virion protein head and packaging 1 28982 29527
YP_009151831.1 NC_027375_p31 hypothetical protein phrog_1307 RNA polymerase inhibitor DNA, RNA and nucleotide metabolism 1 18498 18662
YP_009151843.1 NC_027375_p43 internal core protein phrog_342 internal virion protein with endolysin domain head and packaging 1 32227 36240
YP_009151832.1 NC_027375_p32 DNA-dependent RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 18671 21118
YP_009151846.1 NC_027375_p46 tail fiber phrog_4176 tail fiber protein tail 1 37427 38305