Genomic map of Escherichia phage Seurat (NC_027378)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_027378
Definition
Escherichia phage Seurat, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Seuratvirus.
DB of origin
REFSEQ
Length
56776
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
88
%GC
44.57
Number of singletons
7
Number of paralogs
3

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009151995.1 NC_027378_p51 RNaseH phrog_531 Rnase H DNA, RNA and nucleotide metabolism -1 38278 38940
YP_009151961.1 NC_027378_p17 hypothetical protein phrog_2048 tail protein tail 1 14344 14928
YP_009151994.1 NC_027378_p50 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 37374 38288
YP_009151979.1 NC_027378_p35 queuosine biosynthesis protein FolE phrog_2197 GTP cyclohydrolase other -1 26804 27412
YP_009152000.1 NC_027378_p56 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 41308 41775
YP_009151971.1 NC_027378_p27 hypothetical protein phrog_22730 unknown function unknown function -1 21843 22049
YP_009151965.1 NC_027378_p21 tail fiber protein phrog_4128 tail fiber protein tail 1 18810 20618
YP_009151976.1 NC_027378_p32 hypothetical protein singleton unknown function unknown function -1 25439 25609
YP_009151985.1 NC_027378_p41 hypothetical protein phrog_26258 radical SAM domain-containing protein other -1 30017 30229
YP_009151987.1 NC_027378_p43 queuosine biosynthesis protein QueE phrog_2076 QueE-like radical SAM domain moron, auxiliary metabolic gene and host takeover -1 30484 31191
YP_009151992.1 NC_027378_p48 hypothetical protein phrog_13350 unknown function unknown function -1 35699 36580
YP_009151945.1 NC_027378_p1 TerS phrog_5334 terminase small subunit head and packaging 1 184 741
YP_009152011.1 NC_027378_p67 hypothetical protein singleton unknown function unknown function 1 49557 49706
YP_009152019.1 NC_027378_p75 hypothetical protein phrog_1972 unknown function unknown function 1 51682 51978
YP_009151997.1 NC_027378_p53 hypothetical protein phrog_27666 unknown function unknown function -1 39226 40017
YP_009152006.1 NC_027378_p62 hypothetical protein phrog_27223 unknown function unknown function -1 45811 46593
YP_009151972.1 NC_027378_p28 hypothetical protein phrog_23744 unknown function unknown function -1 22082 22375
YP_009151982.1 NC_027378_p38 hypothetical protein phrog_4899 unknown function unknown function -1 28527 29006
YP_009151975.1 NC_027378_p31 DNA polymerase beta submunit phrog_947 DNA polymerase processivity factor DNA, RNA and nucleotide metabolism -1 24709 25449
YP_009152004.1 NC_027378_p60 primase phrog_3022 DNA primase DNA, RNA and nucleotide metabolism -1 43197 45539
YP_009151983.1 NC_027378_p39 queuosine biosynthesis protein QueC phrog_1550 QueC-like queuosine biosynthesis moron, auxiliary metabolic gene and host takeover -1 29127 29834
YP_009151960.1 NC_027378_p16 hypothetical protein phrog_1302 distal tail protein tail 1 13760 14344
YP_009151954.1 NC_027378_p10 hypothetical protein phrog_169 tail completion or Neck1 protein connector 1 8031 8438
YP_009152026.1 NC_027378_p82 hypothetical protein phrog_4049 unknown function unknown function 1 54023 54448
YP_009152031.1 NC_027378_p87 hypothetical protein phrog_785 holin lysis 1 55975 56319
YP_009151955.1 NC_027378_p11 hypothetical protein phrog_179 tail terminator connector 1 8438 8887
YP_009152028.1 NC_027378_p84 hypothetical protein phrog_1040 peptidase HslV family other 1 54693 55157
YP_009152025.1 NC_027378_p81 hypothetical protein phrog_25149 unknown function unknown function 1 53551 54021
YP_009151951.1 NC_027378_p7 hypothetical protein phrog_10966 unknown function unknown function 1 6349 7002
YP_009151962.1 NC_027378_p18 hypothetical protein phrog_2134 unknown function unknown function 1 14921 15337
YP_009152016.1 NC_027378_p72 hypothetical protein phrog_28969 unknown function unknown function 1 50735 51097
YP_009151973.1 NC_027378_p29 hypothetical protein phrog_26834 unknown function unknown function -1 22375 22659
YP_009152023.1 NC_027378_p79 hypothetical protein phrog_5321 unknown function unknown function 1 52818 53087
YP_009151989.1 NC_027378_p45 hypothetical protein phrog_7864 unknown function unknown function -1 32193 32687
YP_009151949.1 NC_027378_p5 capsid protein phrog_247 major head protein head and packaging 1 4877 5938
YP_009151974.1 NC_027378_p30 DNA polymerase phrog_1252 DNA polymerase DNA, RNA and nucleotide metabolism -1 22724 24709
YP_009151968.1 NC_027378_p24 hypothetical protein phrog_15669 unknown function unknown function -1 21134 21415
YP_009152014.1 NC_027378_p70 hypothetical protein singleton unknown function unknown function 1 50094 50474
YP_009151966.1 NC_027378_p22 hypothetical protein phrog_7239 unknown function unknown function 1 20605 20889
YP_009152032.1 NC_027378_p88 hypothetical protein phrog_5975 unknown function unknown function 1 56300 56776
YP_009151981.1 NC_027378_p37 hypothetical protein phrog_23361 unknown function unknown function -1 27979 28524
YP_009151956.1 NC_027378_p12 hypothetical protein phrog_290 minor tail protein tail 1 8902 9825
YP_009151998.1 NC_027378_p54 hypothetical protein phrog_2480 unknown function unknown function -1 40059 40469
YP_009151969.1 NC_027378_p25 hypothetical protein phrog_23919 unknown function unknown function -1 21412 21618
YP_009151986.1 NC_027378_p42 hypothetical protein phrog_1972 unknown function unknown function -1 30230 30484
YP_009151977.1 NC_027378_p33 hypothetical protein phrog_887 queuine tRNA-ribosyltransferase moron, auxiliary metabolic gene and host takeover -1 25609 26529
YP_009151947.1 NC_027378_p3 structural protein phrog_145 portal protein head and packaging 1 2290 3786
YP_009151959.1 NC_027378_p15 tape measure protein phrog_339 tail length tape measure protein tail 1 10640 13756
YP_009152013.1 NC_027378_p69 hypothetical protein singleton unknown function unknown function 1 49909 50094
YP_009152008.1 NC_027378_p64 hypothetical protein singleton unknown function unknown function -1 47554 47730
YP_009152007.1 NC_027378_p63 hypothetical protein phrog_25978 unknown function unknown function -1 47225 47551
YP_009152024.1 NC_027378_p80 hypothetical protein phrog_289 GTP-binding domain other 1 53155 53547
YP_009152020.1 NC_027378_p76 hypothetical protein singleton unknown function unknown function 1 51965 52051
YP_009151978.1 NC_027378_p34 hypothetical protein phrog_20065 unknown function unknown function -1 26526 26732
YP_009152015.1 NC_027378_p71 hypothetical protein phrog_24875 unknown function unknown function 1 50493 50750
YP_009152003.1 NC_027378_p59 hypothetical protein phrog_22269 unknown function unknown function 1 42946 43170
YP_009151990.1 NC_027378_p46 helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 32747 34723
YP_009152027.1 NC_027378_p83 hypothetical protein phrog_22841 unknown function unknown function 1 54511 54696
YP_009151996.1 NC_027378_p52 hypothetical protein phrog_22347 unknown function unknown function -1 38984 39214
YP_009152005.1 NC_027378_p61 hypothetical protein phrog_11967 unknown function unknown function -1 45546 45749
YP_009152002.1 NC_027378_p58 hypothetical protein phrog_36709 unknown function unknown function -1 42507 42704
YP_009151970.1 NC_027378_p26 hypothetical protein phrog_12090 unknown function unknown function -1 21615 21800
YP_009151993.1 NC_027378_p49 ATPase phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 36580 37308
YP_009151991.1 NC_027378_p47 exonuclease phrog_1990 Cas4-domain exonuclease DNA, RNA and nucleotide metabolism -1 34725 35633
YP_009151999.1 NC_027378_p55 dUTPase phrog_135 dUTPase DNA, RNA and nucleotide metabolism -1 40711 41298
YP_009151963.1 NC_027378_p19 tail fiber protein phrog_31 central tail fiber J tail 1 15337 18459
YP_009151952.1 NC_027378_p8 hypothetical protein phrog_477 head-tail adaptor Ad1 connector 1 7141 7647
YP_009152010.1 NC_027378_p66 hypothetical protein phrog_11084 unknown function unknown function -1 48605 49108
YP_009151980.1 NC_027378_p36 queuosine biosynthesis protein QueD phrog_2389 QueD-like 6-pyruvoyl-tetrahydropterin synthase moron, auxiliary metabolic gene and host takeover -1 27449 27982
YP_009152029.1 NC_027378_p85 hypothetical protein phrog_23528 unknown function unknown function 1 55158 55418
YP_009151957.1 NC_027378_p13 tape measure chaperone phrog_569 tail length tape measure protein tail 1 9835 10640
YP_009152001.1 NC_027378_p57 hypothetical protein phrog_25787 unknown function unknown function -1 42193 42507
YP_009152012.1 NC_027378_p68 hypothetical protein phrog_37795 unknown function unknown function 1 49708 49851
YP_009152009.1 NC_027378_p65 hypothetical protein phrog_22313 unknown function unknown function -1 47904 48518
YP_009152021.1 NC_027378_p77 hypothetical protein phrog_8826 unknown function unknown function 1 52055 52279
YP_009151967.1 NC_027378_p23 hypothetical protein phrog_25697 unknown function unknown function 1 20901 21104
YP_009152018.1 NC_027378_p74 hypothetical protein phrog_27099 unknown function unknown function 1 51340 51630
YP_009151953.1 NC_027378_p9 hypothetical protein phrog_161 head closure Hc1 connector 1 7651 8031
YP_009152022.1 NC_027378_p78 hypothetical protein singleton unknown function unknown function 1 52282 52821
YP_009151988.1 NC_027378_p44 hypothetical protein phrog_11298 unknown function unknown function -1 31261 32064
YP_009151958.1 NC_027378_p14 tape measure chaperone phrog_569 tail length tape measure protein tail 1 9835 10242
YP_009151964.1 NC_027378_p20 lipoprotein phrog_12984 lipoprotein other -1 18494 18727
YP_009151984.1 NC_027378_p40 hypothetical protein phrog_24420 unknown function unknown function -1 29836 30024
YP_009152030.1 NC_027378_p86 endolysin phrog_873 endolysin head and packaging 1 55501 55938
YP_009151946.1 NC_027378_p2 TerL phrog_2 terminase large subunit head and packaging 1 719 2278
YP_009151950.1 NC_027378_p6 hypothetical protein phrog_27336 unknown function unknown function 1 6009 6332
YP_009151948.1 NC_027378_p4 hypothetical protein phrog_206 head scaffolding protein head and packaging 1 3882 4754
YP_009152017.1 NC_027378_p73 hypothetical protein phrog_1972 unknown function unknown function 1 51099 51338