Genomic map of Escherichia phage Pollock (NC_027381)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_027381
Definition
Escherichia phage Pollock, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Ithacavirus.
DB of origin
REFSEQ
Length
68365
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
85
%GC
36.01
Number of singletons
11
Number of paralogs
3

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009152137.1 NC_027381_p36 hypothetical protein phrog_5534 unknown function unknown function 1 14924 15736
YP_009152144.1 NC_027381_p43 hypothetical protein phrog_27750 unknown function unknown function 1 20516 20761
YP_009152153.1 NC_027381_p52 NTPase phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 28870 29598
YP_009152128.1 NC_027381_p27 TciA phrog_632 tellurite resistance moron, auxiliary metabolic gene and host takeover 1 10079 10528
YP_009152156.1 NC_027381_p55 holliday junction resolvase phrog_1682 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 30626 31009
YP_009152104.1 NC_027381_p3 hypothetical protein singleton unknown function unknown function 1 1113 1232
YP_009152176.1 NC_027381_p75 tail spike protein phrog_19921 tail spike protein tail -1 54951 57791
YP_009152177.1 NC_027381_p76 tail spike protein phrog_1171 tail spike protein tail -1 57853 61110
YP_009152173.1 NC_027381_p72 i-spanin phrog_2466 Rz-like spanin lysis 1 54200 54748
YP_009152103.1 NC_027381_p2 hypothetical protein phrog_464 unknown function unknown function 1 724 1035
YP_009152115.1 NC_027381_p14 hypothetical protein phrog_335 phosphatase other 1 3870 4373
YP_009152139.1 NC_027381_p38 serine/threonine protein phosphatase phrog_246 NinI-like serine-threonine phosphatase other 1 17480 18160
YP_009152119.1 NC_027381_p18 hypothetical protein phrog_16571 unknown function unknown function 1 5732 5926
YP_009152175.1 NC_027381_p74 hypothetical protein phrog_16160 unknown function unknown function 1 54717 54917
YP_009152135.1 NC_027381_p34 metallopeptidase phrog_1314 HNH endonuclease DNA, RNA and nucleotide metabolism 1 13334 14434
YP_009152186.1 NC_027381_p85 hypothetical protein phrog_5020 unknown function unknown function 1 67874 68209
YP_009152108.1 NC_027381_p7 hypothetical protein phrog_25167 unknown function unknown function 1 2068 2250
YP_009152141.1 NC_027381_p40 hypothetical protein phrog_23585 unknown function unknown function 1 18546 18809
YP_009152122.1 NC_027381_p21 hypothetical protein phrog_26972 unknown function unknown function 1 7760 8101
YP_009152145.1 NC_027381_p44 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 20742 22688
YP_009152183.1 NC_027381_p82 hypothetical protein phrog_26483 unknown function unknown function 1 65978 67006
YP_009152109.1 NC_027381_p8 hypothetical protein singleton unknown function unknown function 1 2247 2426
YP_009152102.1 NC_027381_p1 hypothetical protein phrog_5020 unknown function unknown function 1 119 454
YP_009152131.1 NC_027381_p30 hypothetical protein singleton unknown function unknown function 1 11070 11156
YP_009152123.1 NC_027381_p22 hypothetical protein phrog_3224 unknown function unknown function 1 8225 8476
YP_009152149.1 NC_027381_p48 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 24402 25034
YP_009152129.1 NC_027381_p28 hypothetical protein phrog_1470 TciB-like inhibition of cell division or resistance to colicin moron, auxiliary metabolic gene and host takeover 1 10529 10690
YP_009152179.1 NC_027381_p78 terminase phrog_38 terminase large subunit head and packaging -1 61858 63462
YP_009152146.1 NC_027381_p45 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 22645 23205
YP_009152140.1 NC_027381_p39 hypothetical protein phrog_27230 unknown function unknown function 1 18212 18517
YP_009152110.1 NC_027381_p9 hypothetical protein singleton unknown function unknown function 1 2477 2722
YP_009152147.1 NC_027381_p46 DNA polymerase phrog_2573 DNA polymerase DNA, RNA and nucleotide metabolism 1 23168 24028
YP_009152185.1 NC_027381_p84 hypothetical protein phrog_26518 unknown function unknown function 1 67362 67652
YP_009152160.1 NC_027381_p59 virion RNA polymerase phrog_2206 virion RNA polymerase DNA, RNA and nucleotide metabolism -1 31855 42468
YP_009152168.1 NC_027381_p67 hypothetical protein phrog_2346 unknown function unknown function -1 50392 50730
YP_009152151.1 NC_027381_p50 hypothetical protein phrog_2139 exonuclease DNA, RNA and nucleotide metabolism 1 25673 26659
YP_009152118.1 NC_027381_p17 hypothetical protein phrog_22821 unknown function unknown function 1 5503 5739
YP_009152132.1 NC_027381_p31 ATPase phrog_16335 ATPase other 1 11532 11789
YP_009152178.1 NC_027381_p77 hypothetical protein phrog_2125 virion structural protein head and packaging -1 61110 61814
YP_009152163.1 NC_027381_p62 hypothetical protein phrog_2220 unknown function unknown function -1 44435 46810
YP_009152120.1 NC_027381_p19 RNA polymerase 2 phrog_2051 RNA polymerase DNA, RNA and nucleotide metabolism 1 6144 7370
YP_009152130.1 NC_027381_p29 hypothetical protein phrog_22456 unknown function unknown function 1 10683 11015
YP_009152133.1 NC_027381_p32 HNH homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 11898 12458
YP_009152107.1 NC_027381_p6 single-strand DNA-binding protein phrog_4099 unknown function unknown function 1 1607 2020
YP_009152169.1 NC_027381_p68 portal protein phrog_1216 portal protein head and packaging -1 50754 52874
YP_009152152.1 NC_027381_p51 DNA primase phrog_2135 DNA primase DNA, RNA and nucleotide metabolism 1 26668 28830
YP_009152155.1 NC_027381_p54 hypothetical protein phrog_20544 unknown function unknown function 1 30390 30623
YP_009152161.1 NC_027381_p60 hypothetical protein phrog_6467 unknown function unknown function -1 42543 43958
YP_009152114.1 NC_027381_p13 hypothetical protein phrog_16571 unknown function unknown function 1 3599 3805
YP_009152142.1 NC_027381_p41 DNA helicase phrog_325 Dda-like helicase DNA, RNA and nucleotide metabolism 1 18796 20040
YP_009152111.1 NC_027381_p10 hypothetical protein phrog_20461 unknown function unknown function 1 2796 3035
YP_009152184.1 NC_027381_p83 transcriptional regulator phrog_10396 transcriptional activator transcription regulation 1 67011 67253
YP_009152165.1 NC_027381_p64 hypothetical protein phrog_2130 unknown function unknown function -1 47440 47991
YP_009152164.1 NC_027381_p63 hypothetical protein phrog_2050 virion structural protein head and packaging -1 46788 47432
YP_009152106.1 NC_027381_p5 hypothetical protein phrog_7648 unknown function unknown function 1 1330 1488
YP_009152113.1 NC_027381_p12 hypothetical protein singleton unknown function unknown function 1 3214 3390
YP_009152154.1 NC_027381_p53 single-stranded DNA-binding protein phrog_743 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 29608 30348
YP_009152124.1 NC_027381_p23 dUTPase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 8586 9035
YP_009152121.1 NC_027381_p20 hypothetical protein phrog_23890 unknown function unknown function 1 7380 7760
YP_009152134.1 NC_027381_p33 hypothetical protein phrog_1297 ATPase other 1 12637 13320
YP_009152143.1 NC_027381_p42 hypothetical protein phrog_24535 unknown function unknown function 1 20043 20516
YP_009152125.1 NC_027381_p24 hypothetical protein singleton unknown function unknown function 1 9035 9208
YP_009152138.1 NC_027381_p37 hypothetical protein phrog_10440 unknown function unknown function 1 15967 17409
YP_009152170.1 NC_027381_p69 holin/antiholin phrog_198 holin lysis 1 53036 53410
YP_009152112.1 NC_027381_p11 hypothetical protein singleton unknown function unknown function 1 3044 3217
YP_009152117.1 NC_027381_p16 RNA polymerase 1 phrog_2166 N4-like RNA polymerase DNA, RNA and nucleotide metabolism 1 4577 5500
YP_009152171.1 NC_027381_p70 holin/antiholin phrog_217 holin lysis 1 53410 53700
YP_009152105.1 NC_027381_p4 hypothetical protein singleton unknown function unknown function 1 1233 1337
YP_009152159.1 NC_027381_p58 hypothetical protein phrog_25115 unknown function unknown function 1 31593 31823
YP_009152148.1 NC_027381_p47 hypothetical protein phrog_474 phosphofructokinase other 1 24025 24402
YP_009152158.1 NC_027381_p57 hypothetical protein singleton unknown function unknown function 1 31447 31596
YP_009152172.1 NC_027381_p71 endolysin phrog_7 endolysin lysis 1 53703 54203
YP_009152157.1 NC_027381_p56 hypothetical protein phrog_27655 unknown function unknown function 1 31011 31433
YP_009152167.1 NC_027381_p66 hypothetical protein phrog_2120 tail length tape measure protein tail -1 49312 50385
YP_009152127.1 NC_027381_p26 hypothetical protein phrog_24045 unknown function unknown function 1 9584 10006
YP_009152180.1 NC_027381_p79 hypothetical protein phrog_2109 unknown function unknown function -1 63452 64147
YP_009152150.1 NC_027381_p49 hypothetical protein phrog_1965 unknown function unknown function 1 25038 25670
YP_009152174.1 NC_027381_p73 o-spanin phrog_3198 Rz-like spanin lysis 1 54456 54674
YP_009152162.1 NC_027381_p61 hypothetical protein phrog_2646 unknown function unknown function -1 43968 44432
YP_009152181.1 NC_027381_p80 hypothetical protein singleton unknown function unknown function 1 64447 64614
YP_009152136.1 NC_027381_p35 hypothetical protein phrog_6596 unknown function unknown function 1 14517 14921
YP_009152116.1 NC_027381_p15 hypothetical protein phrog_16571 unknown function unknown function 1 4345 4587
YP_009152126.1 NC_027381_p25 hypothetical protein phrog_154 replication initiation protein DNA, RNA and nucleotide metabolism 1 9274 9582
YP_009152166.1 NC_027381_p65 major capsid protein phrog_1357 major head protein head and packaging -1 48108 49295
YP_009152182.1 NC_027381_p81 hypothetical protein singleton unknown function unknown function 1 65278 65517