Genomic map of Pseudomonas phage H70 (NC_027384)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_027384
Definition
Pseudomonas phage H70, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Casadabanvirus; unclassified Casadabanvirus.
DB of origin
REFSEQ
Length
37359
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
58
%GC
64.24
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009152350.1 NC_027384_p47 hypothetical protein phrog_10839 unknown function unknown function 1 24797 24925
YP_009152340.1 NC_027384_p37 protease (I) and scaffold (Z) protein phrog_328 head maturation protease head and packaging 1 19446 20552
YP_009152338.1 NC_027384_p35 DNA-binding domain-containing protein phrog_3865 unknown function unknown function 1 19006 19227
YP_009152321.1 NC_027384_p18 hypothetical protein phrog_4093 unknown function unknown function 1 9312 9608
YP_009152305.1 NC_027384_p2 Ner-like protein phrog_769 transcriptional repressor transcription regulation 1 1265 1621
YP_009152346.1 NC_027384_p43 virion structural protein phrog_209 portal protein head and packaging 1 22859 23338
YP_009152349.1 NC_027384_p46 hypothetical protein phrog_1442 tail assembly chaperone tail 1 24312 24797
YP_009152309.1 NC_027384_p6 transposase B phrog_296 DNA transposition protein integration and excision 1 4326 5096
YP_009152317.1 NC_027384_p14 hypothetical protein phrog_4367 unknown function unknown function 1 8169 8477
YP_009152358.1 NC_027384_p55 virion structural protein phrog_1101 tail protein tail 1 33338 35545
YP_009152339.1 NC_027384_p36 hypothetical protein phrog_10291 unknown function unknown function -1 19323 19439
YP_009152314.1 NC_027384_p11 hypothetical protein phrog_2043 unknown function unknown function 1 6969 7253
YP_009152359.1 NC_027384_p56 hypothetical protein phrog_2875 virion structural protein head and packaging 1 35542 36690
YP_009152332.1 NC_027384_p29 hypothetical protein phrog_1244 unknown function unknown function -1 13180 13686
YP_009152328.1 NC_027384_p25 hypothetical protein phrog_2975 Rz-like spanin lysis 1 11968 12369
YP_009152351.1 NC_027384_p48 tail length tape measure protein phrog_24 tail length tape measure protein tail 1 24922 28482
YP_009152308.1 NC_027384_p5 transposase A phrog_310 transposase integration and excision 1 2335 4329
YP_009152316.1 NC_027384_p13 hypothetical protein phrog_6755 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 7790 8167
YP_009152331.1 NC_027384_p28 hypothetical protein phrog_756 DNA binding protein DNA, RNA and nucleotide metabolism 1 12677 13177
YP_009152341.1 NC_027384_p38 virion structural protein phrog_1731 virion structural protein head and packaging 1 20562 20960
YP_009152322.1 NC_027384_p19 GemA phrog_286 unknown function unknown function 1 9605 10012
YP_009152352.1 NC_027384_p49 virion structural protein phrog_687 structural protein head and packaging 1 28490 29446
YP_009152312.1 NC_027384_p9 hypothetical protein phrog_3765 unknown function unknown function 1 6450 6566
YP_009152313.1 NC_027384_p10 hypothetical protein phrog_2119 unknown function unknown function 1 6566 6979
YP_009152307.1 NC_027384_p4 hypothetical protein phrog_4468 unknown function unknown function 1 2058 2267
YP_009152304.1 NC_027384_p1 repressor phrog_4 transcriptional repressor transcription regulation -1 382 1095
YP_009152324.1 NC_027384_p21 hypothetical protein phrog_3648 unknown function unknown function 1 10551 10898
YP_009152356.1 NC_027384_p53 hypothetical protein phrog_1180 tail assembly chaperone tail 1 32894 33133
YP_009152347.1 NC_027384_p44 hypothetical protein phrog_3129 unknown function unknown function 1 23326 23505
YP_009152336.1 NC_027384_p33 virion morphogenesis protein phrog_26 tail completion or Neck1 protein connector 1 18224 18691
YP_009152337.1 NC_027384_p34 hypothetical protein phrog_26918 unknown function unknown function 1 18813 19016
YP_009152318.1 NC_027384_p15 hypothetical protein phrog_1518 host nuclease inhibitor moron, auxiliary metabolic gene and host takeover 1 8480 8761
YP_009152343.1 NC_027384_p40 hypothetical protein phrog_7976 unknown function unknown function 1 21908 22210
YP_009152357.1 NC_027384_p54 hypothetical protein phrog_1196 tail assembly chaperone tail 1 33130 33348
YP_009152315.1 NC_027384_p12 host nuclease inhibitor protein phrog_491 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 7270 7788
YP_009152310.1 NC_027384_p7 DNA-binding domain-containing protein phrog_2030 transcriptional regulator transcription regulation 1 5093 5758
YP_009152355.1 NC_027384_p52 viron structural protein phrog_778 tail assembly protein tail 1 32064 32885
YP_009152325.1 NC_027384_p22 hypothetical protein phrog_1024 unknown function unknown function 1 10891 11313
YP_009152327.1 NC_027384_p24 hypothetical protein phrog_4057 unknown function unknown function 1 11729 11971
YP_009152361.1 NC_027384_p58 hypothetical protein phrog_2623 unknown function unknown function 1 37048 37272
YP_009152333.1 NC_027384_p30 terminase large subunit phrog_38 terminase large subunit head and packaging 1 13685 15340
YP_009152342.1 NC_027384_p39 major head subunit protein phrog_371 major head protein head and packaging 1 20988 21896
YP_009152326.1 NC_027384_p23 hypothetical protein phrog_873 endolysin head and packaging 1 11313 11729
YP_009152311.1 NC_027384_p8 hypothetical protein phrog_3190 unknown function unknown function 1 5830 6465
YP_009152344.1 NC_027384_p41 hypothetical protein phrog_3376 unknown function unknown function 1 22273 22449
YP_009152360.1 NC_027384_p57 hypothetical protein phrog_2432 unknown function unknown function 1 36687 36974
YP_009152334.1 NC_027384_p31 portal protein phrog_113 portal protein head and packaging 1 15352 16938
YP_009152329.1 NC_027384_p26 hypothetical protein phrog_8661 unknown function unknown function 1 12362 12475
YP_009152319.1 NC_027384_p16 hypothetical protein phrog_3223 unknown function unknown function 1 8763 8969
YP_009152354.1 NC_027384_p51 virion structural protein phrog_1082 tail assembly protein tail 1 30371 32074
YP_009152306.1 NC_027384_p3 hypothetical protein phrog_2345 transcriptional regulator transcription regulation 1 1624 2058
YP_009152353.1 NC_027384_p50 virion structural protein phrog_687 structural protein head and packaging 1 29448 30371
YP_009152330.1 NC_027384_p27 hypothetical protein phrog_1103 unknown function unknown function 1 12480 12668
YP_009152345.1 NC_027384_p42 hypothetical protein phrog_195 head-tail adaptor connector 1 22446 22862
YP_009152320.1 NC_027384_p17 hypothetical protein phrog_3652 unknown function unknown function 1 8972 9241
YP_009152335.1 NC_027384_p32 virion morphogenesis protein phrog_220 minor head protein and DNA pilot head and packaging 1 16938 18224
YP_009152348.1 NC_027384_p45 virion structural protein phrog_807 major tail protein with Ig-like domain tail 1 23538 24308
YP_009152323.1 NC_027384_p20 Mor transcription activator phrog_836 late transcriptional activator transcription regulation 1 9999 10448