| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_027384 |
Definition |
Pseudomonas phage H70, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Casadabanvirus; unclassified Casadabanvirus. |
DB of origin |
REFSEQ |
Length |
37359 |
Host Name |
Pseudomonas aeruginosa |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
58 |
%GC |
64.24 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009152350.1 | NC_027384_p47 | hypothetical protein | phrog_10839 | unknown function | unknown function | 1 | 24797 | 24925 |
| YP_009152340.1 | NC_027384_p37 | protease (I) and scaffold (Z) protein | phrog_328 | head maturation protease | head and packaging | 1 | 19446 | 20552 |
| YP_009152338.1 | NC_027384_p35 | DNA-binding domain-containing protein | phrog_3865 | unknown function | unknown function | 1 | 19006 | 19227 |
| YP_009152321.1 | NC_027384_p18 | hypothetical protein | phrog_4093 | unknown function | unknown function | 1 | 9312 | 9608 |
| YP_009152305.1 | NC_027384_p2 | Ner-like protein | phrog_769 | transcriptional repressor | transcription regulation | 1 | 1265 | 1621 |
| YP_009152346.1 | NC_027384_p43 | virion structural protein | phrog_209 | portal protein | head and packaging | 1 | 22859 | 23338 |
| YP_009152349.1 | NC_027384_p46 | hypothetical protein | phrog_1442 | tail assembly chaperone | tail | 1 | 24312 | 24797 |
| YP_009152309.1 | NC_027384_p6 | transposase B | phrog_296 | DNA transposition protein | integration and excision | 1 | 4326 | 5096 |
| YP_009152317.1 | NC_027384_p14 | hypothetical protein | phrog_4367 | unknown function | unknown function | 1 | 8169 | 8477 |
| YP_009152358.1 | NC_027384_p55 | virion structural protein | phrog_1101 | tail protein | tail | 1 | 33338 | 35545 |
| YP_009152339.1 | NC_027384_p36 | hypothetical protein | phrog_10291 | unknown function | unknown function | -1 | 19323 | 19439 |
| YP_009152314.1 | NC_027384_p11 | hypothetical protein | phrog_2043 | unknown function | unknown function | 1 | 6969 | 7253 |
| YP_009152359.1 | NC_027384_p56 | hypothetical protein | phrog_2875 | virion structural protein | head and packaging | 1 | 35542 | 36690 |
| YP_009152332.1 | NC_027384_p29 | hypothetical protein | phrog_1244 | unknown function | unknown function | -1 | 13180 | 13686 |
| YP_009152328.1 | NC_027384_p25 | hypothetical protein | phrog_2975 | Rz-like spanin | lysis | 1 | 11968 | 12369 |
| YP_009152351.1 | NC_027384_p48 | tail length tape measure protein | phrog_24 | tail length tape measure protein | tail | 1 | 24922 | 28482 |
| YP_009152308.1 | NC_027384_p5 | transposase A | phrog_310 | transposase | integration and excision | 1 | 2335 | 4329 |
| YP_009152316.1 | NC_027384_p13 | hypothetical protein | phrog_6755 | Mu Gam-like end protection | DNA, RNA and nucleotide metabolism | 1 | 7790 | 8167 |
| YP_009152331.1 | NC_027384_p28 | hypothetical protein | phrog_756 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 12677 | 13177 |
| YP_009152341.1 | NC_027384_p38 | virion structural protein | phrog_1731 | virion structural protein | head and packaging | 1 | 20562 | 20960 |
| YP_009152322.1 | NC_027384_p19 | GemA | phrog_286 | unknown function | unknown function | 1 | 9605 | 10012 |
| YP_009152352.1 | NC_027384_p49 | virion structural protein | phrog_687 | structural protein | head and packaging | 1 | 28490 | 29446 |
| YP_009152312.1 | NC_027384_p9 | hypothetical protein | phrog_3765 | unknown function | unknown function | 1 | 6450 | 6566 |
| YP_009152313.1 | NC_027384_p10 | hypothetical protein | phrog_2119 | unknown function | unknown function | 1 | 6566 | 6979 |
| YP_009152307.1 | NC_027384_p4 | hypothetical protein | phrog_4468 | unknown function | unknown function | 1 | 2058 | 2267 |
| YP_009152304.1 | NC_027384_p1 | repressor | phrog_4 | transcriptional repressor | transcription regulation | -1 | 382 | 1095 |
| YP_009152324.1 | NC_027384_p21 | hypothetical protein | phrog_3648 | unknown function | unknown function | 1 | 10551 | 10898 |
| YP_009152356.1 | NC_027384_p53 | hypothetical protein | phrog_1180 | tail assembly chaperone | tail | 1 | 32894 | 33133 |
| YP_009152347.1 | NC_027384_p44 | hypothetical protein | phrog_3129 | unknown function | unknown function | 1 | 23326 | 23505 |
| YP_009152336.1 | NC_027384_p33 | virion morphogenesis protein | phrog_26 | tail completion or Neck1 protein | connector | 1 | 18224 | 18691 |
| YP_009152337.1 | NC_027384_p34 | hypothetical protein | phrog_26918 | unknown function | unknown function | 1 | 18813 | 19016 |
| YP_009152318.1 | NC_027384_p15 | hypothetical protein | phrog_1518 | host nuclease inhibitor | moron, auxiliary metabolic gene and host takeover | 1 | 8480 | 8761 |
| YP_009152343.1 | NC_027384_p40 | hypothetical protein | phrog_7976 | unknown function | unknown function | 1 | 21908 | 22210 |
| YP_009152357.1 | NC_027384_p54 | hypothetical protein | phrog_1196 | tail assembly chaperone | tail | 1 | 33130 | 33348 |
| YP_009152315.1 | NC_027384_p12 | host nuclease inhibitor protein | phrog_491 | Mu Gam-like end protection | DNA, RNA and nucleotide metabolism | 1 | 7270 | 7788 |
| YP_009152310.1 | NC_027384_p7 | DNA-binding domain-containing protein | phrog_2030 | transcriptional regulator | transcription regulation | 1 | 5093 | 5758 |
| YP_009152355.1 | NC_027384_p52 | viron structural protein | phrog_778 | tail assembly protein | tail | 1 | 32064 | 32885 |
| YP_009152325.1 | NC_027384_p22 | hypothetical protein | phrog_1024 | unknown function | unknown function | 1 | 10891 | 11313 |
| YP_009152327.1 | NC_027384_p24 | hypothetical protein | phrog_4057 | unknown function | unknown function | 1 | 11729 | 11971 |
| YP_009152361.1 | NC_027384_p58 | hypothetical protein | phrog_2623 | unknown function | unknown function | 1 | 37048 | 37272 |
| YP_009152333.1 | NC_027384_p30 | terminase large subunit | phrog_38 | terminase large subunit | head and packaging | 1 | 13685 | 15340 |
| YP_009152342.1 | NC_027384_p39 | major head subunit protein | phrog_371 | major head protein | head and packaging | 1 | 20988 | 21896 |
| YP_009152326.1 | NC_027384_p23 | hypothetical protein | phrog_873 | endolysin | head and packaging | 1 | 11313 | 11729 |
| YP_009152311.1 | NC_027384_p8 | hypothetical protein | phrog_3190 | unknown function | unknown function | 1 | 5830 | 6465 |
| YP_009152344.1 | NC_027384_p41 | hypothetical protein | phrog_3376 | unknown function | unknown function | 1 | 22273 | 22449 |
| YP_009152360.1 | NC_027384_p57 | hypothetical protein | phrog_2432 | unknown function | unknown function | 1 | 36687 | 36974 |
| YP_009152334.1 | NC_027384_p31 | portal protein | phrog_113 | portal protein | head and packaging | 1 | 15352 | 16938 |
| YP_009152329.1 | NC_027384_p26 | hypothetical protein | phrog_8661 | unknown function | unknown function | 1 | 12362 | 12475 |
| YP_009152319.1 | NC_027384_p16 | hypothetical protein | phrog_3223 | unknown function | unknown function | 1 | 8763 | 8969 |
| YP_009152354.1 | NC_027384_p51 | virion structural protein | phrog_1082 | tail assembly protein | tail | 1 | 30371 | 32074 |
| YP_009152306.1 | NC_027384_p3 | hypothetical protein | phrog_2345 | transcriptional regulator | transcription regulation | 1 | 1624 | 2058 |
| YP_009152353.1 | NC_027384_p50 | virion structural protein | phrog_687 | structural protein | head and packaging | 1 | 29448 | 30371 |
| YP_009152330.1 | NC_027384_p27 | hypothetical protein | phrog_1103 | unknown function | unknown function | 1 | 12480 | 12668 |
| YP_009152345.1 | NC_027384_p42 | hypothetical protein | phrog_195 | head-tail adaptor | connector | 1 | 22446 | 22862 |
| YP_009152320.1 | NC_027384_p17 | hypothetical protein | phrog_3652 | unknown function | unknown function | 1 | 8972 | 9241 |
| YP_009152335.1 | NC_027384_p32 | virion morphogenesis protein | phrog_220 | minor head protein and DNA pilot | head and packaging | 1 | 16938 | 18224 |
| YP_009152348.1 | NC_027384_p45 | virion structural protein | phrog_807 | major tail protein with Ig-like domain | tail | 1 | 23538 | 24308 |
| YP_009152323.1 | NC_027384_p20 | Mor transcription activator | phrog_836 | late transcriptional activator | transcription regulation | 1 | 9999 | 10448 |