| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_027389 |
Definition |
Propionibacterium phage PHL141N00, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus. |
DB of origin |
REFSEQ |
Length |
29494 |
Host Name |
Propionibacterium acnes |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
45 |
%GC |
53.94 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009152607.1 | NC_027389_p17 | hypothetical protein | phrog_1910 | lectin | other | 1 | 13424 | 14242 |
| YP_009152598.1 | NC_027389_p8 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 6110 | 6457 |
| YP_009152595.1 | NC_027389_p5 | scaffold protein | phrog_1879 | head scaffolding protein | head and packaging | 1 | 4091 | 4645 |
| YP_009152616.1 | NC_027389_p26 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18250 | 19296 |
| YP_009152635.1 | NC_027389_p45 | endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 29140 | 29442 |
| YP_009152600.1 | NC_027389_p10 | hypothetical protein | phrog_1892 | minor tail protein | tail | 1 | 6751 | 7122 |
| YP_009152618.1 | NC_027389_p28 | hypothetical protein | phrog_2548 | unknown function | unknown function | -1 | 19468 | 20028 |
| YP_009152591.1 | NC_027389_p1 | excinuclease | phrog_1897 | terminase small subunit | head and packaging | 1 | 132 | 380 |
| YP_009152610.1 | NC_027389_p20 | endolysin | phrog_670 | endolysin | lysis | 1 | 15393 | 16247 |
| YP_009152612.1 | NC_027389_p22 | hypothetical protein | phrog_2092 | unknown function | unknown function | -1 | 16741 | 17229 |
| YP_009152634.1 | NC_027389_p44 | hypothetical protein | phrog_5628 | unknown function | unknown function | 1 | 28942 | 29103 |
| YP_009152627.1 | NC_027389_p37 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 24623 | 24982 |
| YP_009152611.1 | NC_027389_p21 | holin | phrog_443 | holin | lysis | 1 | 16254 | 16655 |
| YP_009152599.1 | NC_027389_p9 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 6464 | 6754 |
| YP_009152602.1 | NC_027389_p12 | hypothetical protein | phrog_1927 | tail assembly chaperone | tail | 1 | 7829 | 8125 |
| YP_009152601.1 | NC_027389_p11 | major tail protein | phrog_117 | major tail protein | tail | 1 | 7163 | 7801 |
| YP_009152620.1 | NC_027389_p30 | DNA primase | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20635 | 21306 |
| YP_009152623.1 | NC_027389_p33 | DNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 21770 | 22723 |
| YP_009152630.1 | NC_027389_p40 | hypothetical protein | phrog_1908 | unknown function | unknown function | -1 | 25539 | 26072 |
| YP_009152629.1 | NC_027389_p39 | hypothetical protein | phrog_1884 | unknown function | unknown function | -1 | 25289 | 25516 |
| YP_009152631.1 | NC_027389_p41 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26193 | 26504 |
| YP_009152606.1 | NC_027389_p16 | protease | phrog_110 | minor tail protein | tail | 1 | 12249 | 13406 |
| YP_009152593.1 | NC_027389_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 1893 | 3218 |
| YP_009152614.1 | NC_027389_p24 | hypothetical protein | phrog_1947 | unknown function | unknown function | -1 | 17619 | 17903 |
| YP_009152615.1 | NC_027389_p25 | hypothetical protein | phrog_1340 | unknown function | unknown function | -1 | 17920 | 18240 |
| YP_009152632.1 | NC_027389_p42 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26544 | 26852 |
| YP_009152633.1 | NC_027389_p43 | hypothetical protein | phrog_8276 | unknown function | unknown function | 1 | 28643 | 28783 |
| YP_009152609.1 | NC_027389_p19 | collagen-like protein | phrog_1806 | collagen like minor tail | tail | 1 | 14545 | 15351 |
| YP_009152613.1 | NC_027389_p23 | sigma factor | phrog_1729 | unknown function | unknown function | -1 | 17235 | 17615 |
| YP_009152592.1 | NC_027389_p2 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 424 | 1896 |
| YP_009152597.1 | NC_027389_p7 | hypothetical protein | phrog_1290 | head-tail adaptor | connector | 1 | 5647 | 6108 |
| YP_009152617.1 | NC_027389_p27 | hypothetical protein | phrog_1923 | unknown function | unknown function | -1 | 19293 | 19484 |
| YP_009152603.1 | NC_027389_p13 | hypothetical protein | phrog_3166 | unknown function | unknown function | 1 | 8224 | 8511 |
| YP_009152624.1 | NC_027389_p34 | hypothetical protein | phrog_1288 | unknown function | unknown function | -1 | 22770 | 23240 |
| YP_009152628.1 | NC_027389_p38 | hypothetical protein | phrog_1937 | unknown function | unknown function | -1 | 25089 | 25292 |
| YP_009152608.1 | NC_027389_p18 | hypothetical protein | phrog_1958 | minor tail protein | tail | 1 | 14288 | 14545 |
| YP_009152626.1 | NC_027389_p36 | exonuclease | phrog_1870 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 23682 | 24623 |
| YP_009152621.1 | NC_027389_p31 | DNA primase | phrog_2304 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 21143 | 21544 |
| YP_009152605.1 | NC_027389_p15 | minor tail subunit | phrog_106 | minor tail protein | tail | 1 | 11285 | 12241 |
| YP_009152625.1 | NC_027389_p35 | hypothetical protein | phrog_1890 | unknown function | unknown function | -1 | 23281 | 23685 |
| YP_009152622.1 | NC_027389_p32 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 21504 | 21860 |
| YP_009152594.1 | NC_027389_p4 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 3225 | 3980 |
| YP_009152604.1 | NC_027389_p14 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 8519 | 11284 |
| YP_009152619.1 | NC_027389_p29 | hypothetical protein | phrog_1881 | unknown function | unknown function | -1 | 20025 | 20588 |
| YP_009152596.1 | NC_027389_p6 | major head protein | phrog_10 | major head protein | head and packaging | 1 | 4652 | 5599 |