| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_027391 |
Definition |
Propionibacterium phage PHL041M10, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus. |
DB of origin |
REFSEQ |
Length |
29412 |
Host Name |
Propionibacterium acnes |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
45 |
%GC |
54.27 |
Number of singletons |
3 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009152666.1 | NC_027391_p5 | scaffold protein | phrog_1879 | head scaffolding protein | head and packaging | 1 | 4074 | 4625 |
| YP_009152674.1 | NC_027391_p13 | hypothetical protein | phrog_3166 | unknown function | unknown function | 1 | 8254 | 8541 |
| YP_009152675.1 | NC_027391_p14 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 8549 | 11314 |
| YP_009152702.1 | NC_027391_p41 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26291 | 26605 |
| YP_009152696.1 | NC_027391_p35 | hypothetical protein | phrog_1890 | unknown function | unknown function | -1 | 23384 | 23788 |
| YP_009152689.1 | NC_027391_p28 | hypothetical protein | phrog_2548 | unknown function | unknown function | -1 | 19567 | 20130 |
| YP_009152662.1 | NC_027391_p1 | excinuclease | phrog_1897 | terminase small subunit | head and packaging | 1 | 1 | 372 |
| YP_009152700.1 | NC_027391_p39 | hypothetical protein | phrog_1884 | unknown function | unknown function | -1 | 25385 | 25612 |
| YP_009152681.1 | NC_027391_p20 | endolysin | phrog_670 | endolysin | lysis | 1 | 15443 | 16306 |
| YP_009152694.1 | NC_027391_p33 | DNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 21872 | 22825 |
| YP_009152683.1 | NC_027391_p22 | hypothetical protein | phrog_2092 | unknown function | unknown function | -1 | 16803 | 17318 |
| YP_009152706.1 | NC_027391_p45 | endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 29073 | 29375 |
| YP_009152678.1 | NC_027391_p17 | hypothetical protein | phrog_1910 | lectin | other | 1 | 13462 | 14280 |
| YP_009152668.1 | NC_027391_p7 | hypothetical protein | phrog_1290 | head-tail adaptor | connector | 1 | 5620 | 6108 |
| YP_009152672.1 | NC_027391_p11 | major tail protein | phrog_117 | major tail protein | tail | 1 | 7165 | 7830 |
| YP_009152669.1 | NC_027391_p8 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 6110 | 6457 |
| YP_009152685.1 | NC_027391_p24 | hypothetical protein | phrog_1947 | unknown function | unknown function | -1 | 17719 | 17994 |
| YP_009152671.1 | NC_027391_p10 | hypothetical protein | phrog_1892 | minor tail protein | tail | 1 | 6751 | 7122 |
| YP_009152697.1 | NC_027391_p36 | exonuclease | phrog_1870 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 23785 | 24726 |
| YP_009152705.1 | NC_027391_p44 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28876 | 29364 |
| YP_009152693.1 | NC_027391_p32 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 21606 | 21962 |
| YP_009152704.1 | NC_027391_p43 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28649 | 28714 |
| YP_009152667.1 | NC_027391_p6 | major head protein | phrog_10 | major head protein | head and packaging | 1 | 4632 | 5603 |
| YP_009152701.1 | NC_027391_p40 | hypothetical protein | phrog_1908 | unknown function | unknown function | -1 | 25637 | 26170 |
| YP_009152663.1 | NC_027391_p2 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 416 | 1888 |
| YP_009152692.1 | NC_027391_p31 | DNA primase | phrog_2304 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 21245 | 21646 |
| YP_009152665.1 | NC_027391_p4 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 3210 | 3965 |
| YP_009152679.1 | NC_027391_p18 | hypothetical protein | singleton | unknown function | unknown function | 1 | 14320 | 14559 |
| YP_009152699.1 | NC_027391_p38 | hypothetical protein | phrog_1937 | unknown function | unknown function | -1 | 25185 | 25388 |
| YP_009152664.1 | NC_027391_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 1885 | 3204 |
| YP_009152684.1 | NC_027391_p23 | sigma factor | phrog_1729 | unknown function | unknown function | -1 | 17323 | 17715 |
| YP_009152682.1 | NC_027391_p21 | holin | phrog_443 | holin | lysis | 1 | 16319 | 16720 |
| YP_009152677.1 | NC_027391_p16 | protease | phrog_110 | minor tail protein | tail | 1 | 12285 | 13442 |
| YP_009152703.1 | NC_027391_p42 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26641 | 26949 |
| YP_009152670.1 | NC_027391_p9 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 6464 | 6754 |
| YP_009152673.1 | NC_027391_p12 | hypothetical protein | phrog_1927 | tail assembly chaperone | tail | 1 | 7859 | 8155 |
| YP_009152690.1 | NC_027391_p29 | hypothetical protein | phrog_1881 | unknown function | unknown function | -1 | 20127 | 20693 |
| YP_009152687.1 | NC_027391_p26 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18343 | 19389 |
| YP_009152698.1 | NC_027391_p37 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 24726 | 25079 |
| YP_009152686.1 | NC_027391_p25 | hypothetical protein | phrog_1340 | unknown function | unknown function | -1 | 18012 | 18332 |
| YP_009152695.1 | NC_027391_p34 | hypothetical protein | phrog_1288 | unknown function | unknown function | -1 | 22866 | 23336 |
| YP_009152688.1 | NC_027391_p27 | hypothetical protein | phrog_1923 | unknown function | unknown function | -1 | 19386 | 19583 |
| YP_009152676.1 | NC_027391_p15 | minor tail subunit | phrog_106 | minor tail protein | tail | 1 | 11381 | 12277 |
| YP_009152691.1 | NC_027391_p30 | DNA primase | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20737 | 21408 |
| YP_009152680.1 | NC_027391_p19 | collagen-like protein | phrog_1806 | collagen like minor tail | tail | 1 | 14591 | 15388 |