Genomic map of Vibrio phage J2 (NC_027393)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_027393
Definition
Vibrio phage J2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Enhodamvirus; unclassified Enhodamvirus.
DB of origin
REFSEQ
Length
39530
Host Name
Vibrio cholerae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
48
%GC
50.58
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009152793.1 NC_027393_p42 hypothetical protein phrog_9495 unknown function unknown function -1 36724 37095
YP_009152760.1 NC_027393_p9 hypothetical protein phrog_8977 unknown function unknown function 1 7044 7313
YP_009152785.1 NC_027393_p34 hypothetical protein phrog_9940 unknown function unknown function -1 32401 32754
YP_009152795.1 NC_027393_p44 hypothetical protein phrog_9197 unknown function unknown function -1 37352 37576
YP_009152778.1 NC_027393_p27 adenylosuccinate synthetase phrog_1211 2-aminooxy adenylosuccinate synthetase DNA, RNA and nucleotide metabolism -1 23604 24635
YP_009152768.1 NC_027393_p17 hypothetical protein phrog_9153 unknown function unknown function 1 13757 15841
YP_009152766.1 NC_027393_p15 hypothetical protein phrog_376 tail protein tail 1 11566 13350
YP_009152770.1 NC_027393_p19 hypothetical protein phrog_684 virion structural protein head and packaging 1 17015 19363
YP_009152759.1 NC_027393_p8 hypothetical protein phrog_3437 major head protein head and packaging 1 6009 6977
YP_009152799.1 NC_027393_p48 hypothetical protein phrog_12668 unknown function unknown function -1 39225 39494
YP_009152761.1 NC_027393_p10 hypothetical protein phrog_8869 unknown function unknown function 1 7328 8176
YP_009152763.1 NC_027393_p12 hypothetical protein phrog_894 endolysin lysis 1 8540 9013
YP_009152776.1 NC_027393_p25 hypothetical protein phrog_7076 dATP triphosphohydrolase DNA, RNA and nucleotide metabolism -1 22828 23340
YP_009152783.1 NC_027393_p32 hypothetical protein phrog_2378 unknown function unknown function -1 30337 30804
YP_009152792.1 NC_027393_p41 hypothetical protein phrog_3600 antimicrobial peptide resistance and lipid A acylation protein PagP moron, auxiliary metabolic gene and host takeover -1 36172 36621
YP_009152755.1 NC_027393_p4 hypothetical protein phrog_332 head-tail adaptor connector 1 2854 4497
YP_009152780.1 NC_027393_p29 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 26955 28856
YP_009152796.1 NC_027393_p45 hypothetical protein phrog_9131 unknown function unknown function -1 37645 37935
YP_009152777.1 NC_027393_p26 hypothetical protein phrog_9860 unknown function unknown function -1 23342 23602
YP_009152769.1 NC_027393_p18 hypothetical protein phrog_8824 unknown function unknown function 1 15841 17013
YP_009152784.1 NC_027393_p33 superfamily II DNA/RNA helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 30867 32336
YP_009152752.1 NC_027393_p1 hypothetical protein phrog_9836 unknown function unknown function 1 412 633
YP_009152753.1 NC_027393_p2 hypothetical protein phrog_8823 terminase small subunit head and packaging 1 650 1150
YP_009152762.1 NC_027393_p11 hypothetical protein phrog_8135 unknown function unknown function 1 8173 8538
YP_009152758.1 NC_027393_p7 hypothetical protein phrog_3742 unknown function unknown function 1 4999 5841
YP_009152773.1 NC_027393_p22 hypothetical protein phrog_474 phosphofructokinase other -1 21849 22166
YP_009152764.1 NC_027393_p13 hypothetical protein phrog_8910 unknown function unknown function 1 9006 9308
YP_009152789.1 NC_027393_p38 hypothetical protein phrog_9382 unknown function unknown function -1 34440 34760
YP_009152765.1 NC_027393_p14 hypothetical protein phrog_9239 tail tubular protein tail 1 9332 11557
YP_009152771.1 NC_027393_p20 hypothetical protein phrog_4440 tail fiber protein tail 1 19367 20440
YP_009152788.1 NC_027393_p37 hypothetical protein phrog_3392 unknown function unknown function -1 34028 34438
YP_009152794.1 NC_027393_p43 hypothetical protein phrog_13675 unknown function unknown function -1 37092 37352
YP_009152798.1 NC_027393_p47 hypothetical protein phrog_14193 unknown function unknown function -1 38701 39192
YP_009152797.1 NC_027393_p46 hypothetical protein phrog_8878 unknown function unknown function -1 38042 38632
YP_009152775.1 NC_027393_p24 hypothetical protein phrog_10658 unknown function unknown function -1 22670 22831
YP_009152772.1 NC_027393_p21 outer capsid protein phrog_8700 unknown function unknown function 1 20442 21824
YP_009152774.1 NC_027393_p23 hypothetical protein phrog_2165 DNA helicase DNA, RNA and nucleotide metabolism -1 22243 22680
YP_009152757.1 NC_027393_p6 hypothetical protein phrog_5977 unknown function unknown function 1 4737 4994
YP_009152781.1 NC_027393_p30 single stranded DNA-binding protein phrog_7364 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 28865 29341
YP_009152790.1 NC_027393_p39 hypothetical protein phrog_9688 unknown function unknown function -1 34808 35578
YP_009152779.1 NC_027393_p28 integrase phrog_1156 DNA primase DNA, RNA and nucleotide metabolism -1 24677 26965
YP_009152754.1 NC_027393_p3 terminase phrog_2 terminase large subunit head and packaging 1 1137 2843
YP_009152787.1 NC_027393_p36 hypothetical protein phrog_4049 unknown function unknown function -1 33567 34031
YP_009152756.1 NC_027393_p5 hypothetical protein phrog_9429 unknown function unknown function 1 4497 4724
YP_009152782.1 NC_027393_p31 hypothetical protein phrog_2402 unknown function unknown function -1 29407 30216
YP_009152767.1 NC_027393_p16 hypothetical protein phrog_9290 unknown function unknown function 1 13356 13760
YP_009152786.1 NC_027393_p35 hypothetical protein phrog_8941 unknown function unknown function -1 32754 33434
YP_009152791.1 NC_027393_p40 hypothetical protein phrog_9060 unknown function unknown function -1 35677 36162