functional categories (each PHROG annotation is associated to a category) | Notes | ||
head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
tail | lysis | other | - Scroll to zoom |
unknown function | - Click on a protein to see its PHROG |
Locus |
NC_027395 |
Definition |
Phage vB_EcoP_SU10, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Kuravirus. |
DB of origin |
REFSEQ |
Length |
77327 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
125 |
%GC |
42.06 |
Number of singletons |
2 |
Number of paralogs |
6 |
NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
---|---|---|---|---|---|---|---|---|
YP_009152872.1 | NC_027395_p21 | hypothetical protein | phrog_4287 | DNA ejection protein | DNA, RNA and nucleotide metabolism | 1 | 21904 | 22956 |
YP_009152879.1 | NC_027395_p28 | hypothetical protein | phrog_10643 | unknown function | unknown function | -1 | 31067 | 31246 |
YP_009152947.1 | NC_027395_p96 | hypothetical protein | phrog_12612 | unknown function | unknown function | -1 | 63780 | 64040 |
YP_009152958.1 | NC_027395_p107 | hypothetical protein | phrog_10911 | unknown function | unknown function | -1 | 67159 | 67383 |
YP_009152971.1 | NC_027395_p120 | hypothetical protein | phrog_13018 | unknown function | unknown function | -1 | 71661 | 72560 |
YP_009152972.1 | NC_027395_p121 | hypothetical protein | phrog_13168 | terminase | head and packaging | -1 | 74507 | 74872 |
YP_009152956.1 | NC_027395_p105 | hypothetical protein | phrog_8294 | unknown function | unknown function | -1 | 66739 | 66903 |
YP_009152911.1 | NC_027395_p60 | hypothetical protein | phrog_15951 | unknown function | unknown function | -1 | 44278 | 44463 |
YP_009152959.1 | NC_027395_p108 | hypothetical protein | phrog_18461 | unknown function | unknown function | -1 | 67380 | 67556 |
YP_009152948.1 | NC_027395_p97 | hypothetical protein | phrog_7431 | unknown function | unknown function | -1 | 64043 | 64288 |
YP_009152883.1 | NC_027395_p32 | RNA polymerase ECF sigma factor | phrog_1740 | RNA polymerase sigma factor | transcription regulation | -1 | 33344 | 33988 |
YP_009152884.1 | NC_027395_p33 | Appr-1-p processing enzyme family protein | phrog_335 | phosphatase | other | -1 | 34011 | 34451 |
YP_009152919.1 | NC_027395_p68 | hypothetical protein | phrog_10984 | unknown function | unknown function | -1 | 46826 | 47155 |
YP_009152859.1 | NC_027395_p8 | scaffolding protein | phrog_9013 | head scaffolding protein | head and packaging | 1 | 6232 | 7308 |
YP_009152942.1 | NC_027395_p91 | hypothetical protein | phrog_11370 | unknown function | unknown function | -1 | 62119 | 62481 |
YP_009152949.1 | NC_027395_p98 | hypothetical protein | phrog_7832 | unknown function | unknown function | -1 | 64285 | 64539 |
YP_009152903.1 | NC_027395_p52 | hypothetical protein | phrog_11427 | unknown function | unknown function | -1 | 41344 | 41757 |
YP_009152876.1 | NC_027395_p25 | hypothetical protein | phrog_653 | unknown function | unknown function | -1 | 30289 | 30450 |
YP_009152894.1 | NC_027395_p43 | hypothetical protein | phrog_10314 | unknown function | unknown function | -1 | 37605 | 37772 |
YP_009152866.1 | NC_027395_p15 | lysis protein | phrog_7 | endolysin | lysis | 1 | 14710 | 15201 |
YP_009152973.1 | NC_027395_p122 | hypothetical protein | phrog_16976 | unknown function | unknown function | -1 | 74969 | 75229 |
YP_009152955.1 | NC_027395_p104 | lipoprotein | phrog_4281 | unknown function | unknown function | -1 | 66234 | 66515 |
YP_009152932.1 | NC_027395_p81 | hypothetical protein | phrog_8339 | unknown function | unknown function | -1 | 53389 | 53631 |
YP_009152852.1 | NC_027395_p1 | hypothetical protein | phrog_7696 | unknown function | unknown function | 1 | 253 | 417 |
YP_009152874.1 | NC_027395_p23 | hypothetical protein | phrog_12130 | unknown function | unknown function | 1 | 23951 | 25606 |
YP_009152965.1 | NC_027395_p114 | hypothetical protein | phrog_9955 | unknown function | unknown function | -1 | 69038 | 69274 |
YP_009152962.1 | NC_027395_p111 | hypothetical protein | phrog_6570 | unknown function | unknown function | -1 | 68333 | 68551 |
YP_009152938.1 | NC_027395_p87 | hypothetical protein | phrog_4877 | unknown function | unknown function | -1 | 58500 | 59117 |
YP_009152899.1 | NC_027395_p48 | hypothetical protein | phrog_1312 | unknown function | unknown function | -1 | 38734 | 38862 |
YP_009152937.1 | NC_027395_p86 | amidoligase enzyme | phrog_7469 | amidoligase enzyme | other | -1 | 57400 | 58503 |
YP_009152927.1 | NC_027395_p76 | primase/helicase | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | -1 | 50513 | 52303 |
YP_009152895.1 | NC_027395_p44 | hypothetical protein | phrog_14089 | unknown function | unknown function | -1 | 37769 | 37945 |
YP_009152976.1 | NC_027395_p125 | hypothetical protein | phrog_36409 | unknown function | unknown function | -1 | 75733 | 76605 |
YP_009152870.1 | NC_027395_p19 | hypothetical protein | phrog_1265 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 20058 | 21089 |
YP_009152960.1 | NC_027395_p109 | hypothetical protein | phrog_9565 | unknown function | unknown function | -1 | 67635 | 67814 |
YP_009152885.1 | NC_027395_p34 | hypothetical protein | phrog_2425 | unknown function | unknown function | -1 | 34451 | 34624 |
YP_009152931.1 | NC_027395_p80 | hypothetical protein | phrog_8591 | unknown function | unknown function | -1 | 53207 | 53392 |
YP_009152974.1 | NC_027395_p123 | hypothetical protein | singleton | unknown function | unknown function | -1 | 75219 | 75440 |
YP_009152869.1 | NC_027395_p18 | tail tip fiber protein | phrog_16534 | tail fiber protein | tail | 1 | 19088 | 20056 |
YP_009152930.1 | NC_027395_p79 | hypothetical protein | phrog_13365 | unknown function | unknown function | -1 | 52944 | 53153 |
YP_009152855.1 | NC_027395_p4 | hypothetical protein | phrog_8771 | unknown function | unknown function | 1 | 1505 | 1978 |
YP_009152946.1 | NC_027395_p95 | hypothetical protein | phrog_14557 | unknown function | unknown function | -1 | 63667 | 63783 |
YP_009152924.1 | NC_027395_p73 | deoxycytidine triphosphate deaminase | phrog_1663 | dCTP deaminase | DNA, RNA and nucleotide metabolism | -1 | 48047 | 48580 |
YP_009152871.1 | NC_027395_p20 | internal virion protein | phrog_12507 | transglycosylase | other | 1 | 21102 | 21884 |
YP_009152873.1 | NC_027395_p22 | DNA injection protein | phrog_4287 | DNA ejection protein | DNA, RNA and nucleotide metabolism | 1 | 22969 | 23937 |
YP_009152878.1 | NC_027395_p27 | hypothetical protein | phrog_3106 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 30679 | 31080 |
YP_009152868.1 | NC_027395_p17 | surface protein | phrog_14417 | tail fiber protein; host specificity | tail | 1 | 16027 | 19044 |
YP_009152877.1 | NC_027395_p26 | hypothetical protein | phrog_3715 | unknown function | unknown function | -1 | 30459 | 30713 |
YP_009152970.1 | NC_027395_p119 | hypothetical protein | phrog_12675 | unknown function | unknown function | -1 | 71331 | 71549 |
YP_009152926.1 | NC_027395_p75 | DNA polymerase | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | -1 | 49962 | 50519 |
YP_009152925.1 | NC_027395_p74 | nucleotidyltransferase domain-containing protein | phrog_12715 | nucleotidyltransferase | DNA, RNA and nucleotide metabolism | -1 | 48590 | 49960 |
YP_009152865.1 | NC_027395_p14 | holin | phrog_11161 | holin | lysis | 1 | 14462 | 14680 |
YP_009152939.1 | NC_027395_p88 | hypothetical protein | phrog_3815 | COOH.NH2 ligase | other | -1 | 59127 | 59933 |
YP_009152896.1 | NC_027395_p45 | hypothetical protein | phrog_4919 | unknown function | unknown function | -1 | 37942 | 38334 |
YP_009152941.1 | NC_027395_p90 | hypothetical protein | phrog_13063 | unknown function | unknown function | -1 | 60908 | 62107 |
YP_009152910.1 | NC_027395_p59 | NAD-dependent DNA ligase | phrog_6466 | DNA ligase | DNA, RNA and nucleotide metabolism | -1 | 43952 | 44281 |
YP_009152923.1 | NC_027395_p72 | hypothetical protein | phrog_2347 | unknown function | unknown function | -1 | 47840 | 48046 |
YP_009152929.1 | NC_027395_p78 | YtfP/UPF0131-like protein | phrog_2520 | gamma-glutamyl cyclotransferase | moron, auxiliary metabolic gene and host takeover | -1 | 52523 | 52942 |
YP_009152966.1 | NC_027395_p115 | hypothetical protein | phrog_12154 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 69264 | 69560 |
YP_009152917.1 | NC_027395_p66 | hypothetical protein | phrog_9296 | unknown function | unknown function | -1 | 46030 | 46209 |
YP_009152964.1 | NC_027395_p113 | hypothetical protein | phrog_16423 | unknown function | unknown function | -1 | 68799 | 69035 |
YP_009152916.1 | NC_027395_p65 | thiol-disulfide isomerase and thioredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 45746 | 46021 |
YP_009152920.1 | NC_027395_p69 | hypothetical protein | phrog_4939 | unknown function | unknown function | -1 | 47228 | 47437 |
YP_009152943.1 | NC_027395_p92 | hypothetical protein | phrog_13048 | unknown function | unknown function | -1 | 62484 | 62636 |
YP_009152952.1 | NC_027395_p101 | hypothetical protein | phrog_13157 | unknown function | unknown function | -1 | 65569 | 65745 |
YP_009152953.1 | NC_027395_p102 | hypothetical protein | phrog_6570 | unknown function | unknown function | -1 | 65755 | 65976 |
YP_009152961.1 | NC_027395_p110 | hypothetical protein | phrog_13305 | unknown function | unknown function | -1 | 67834 | 67974 |
YP_009152906.1 | NC_027395_p55 | hypothetical protein | phrog_9585 | unknown function | unknown function | -1 | 42371 | 42664 |
YP_009152893.1 | NC_027395_p42 | hypothetical protein | phrog_3955 | unknown function | unknown function | -1 | 37465 | 37608 |
YP_009152940.1 | NC_027395_p89 | hypothetical protein | phrog_13102 | unknown function | unknown function | -1 | 59926 | 60897 |
YP_009152887.1 | NC_027395_p36 | HNH homing endonuclease | phrog_959 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 35005 | 35418 |
YP_009152933.1 | NC_027395_p82 | ATP-grasp enzyme | phrog_2599 | ribosomal protein S6 glutaminyl transferase | moron, auxiliary metabolic gene and host takeover | -1 | 53644 | 54846 |
YP_009152968.1 | NC_027395_p117 | hypothetical protein | phrog_11641 | unknown function | unknown function | -1 | 70391 | 70834 |
YP_009152856.1 | NC_027395_p5 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 2140 | 3681 |
YP_009152900.1 | NC_027395_p49 | hypothetical protein | phrog_2430 | unknown function | unknown function | -1 | 38918 | 39109 |
YP_009152860.1 | NC_027395_p9 | major head protein | phrog_1328 | major head protein | head and packaging | 1 | 7350 | 8408 |
YP_009152880.1 | NC_027395_p29 | 5'-3' exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 31260 | 32078 |
YP_009152857.1 | NC_027395_p6 | portal protein | phrog_1216 | portal protein | head and packaging | 1 | 3743 | 5986 |
YP_009152889.1 | NC_027395_p38 | hypothetical protein | phrog_24970 | unknown function | unknown function | -1 | 36490 | 36597 |
YP_009152867.1 | NC_027395_p16 | structural protein | phrog_6465 | tail protein | tail | 1 | 15214 | 16017 |
YP_009152891.1 | NC_027395_p40 | serine/threonine protein phosphatase | phrog_547 | phosphoesterase | other | -1 | 36721 | 37224 |
YP_009152921.1 | NC_027395_p70 | hypothetical protein | phrog_4939 | unknown function | unknown function | -1 | 47437 | 47646 |
YP_009152904.1 | NC_027395_p53 | hypothetical protein | phrog_6814 | unknown function | unknown function | -1 | 41761 | 42045 |
YP_009152950.1 | NC_027395_p99 | hypothetical protein | phrog_323 | transcriptional regulator, D5-like | transcription regulation | -1 | 64548 | 64859 |
YP_009152922.1 | NC_027395_p71 | hypothetical protein | phrog_4939 | unknown function | unknown function | -1 | 47646 | 47843 |
YP_009152935.1 | NC_027395_p84 | hypothetical protein | phrog_9477 | unknown function | unknown function | -1 | 55054 | 55287 |
YP_009152898.1 | NC_027395_p47 | hypothetical protein | phrog_10640 | unknown function | unknown function | -1 | 38567 | 38734 |
YP_009152858.1 | NC_027395_p7 | hypothetical protein | phrog_12967 | unknown function | unknown function | 1 | 5996 | 6232 |
YP_009152967.1 | NC_027395_p116 | hypothetical protein | phrog_12974 | unknown function | unknown function | -1 | 69760 | 70149 |
YP_009152888.1 | NC_027395_p37 | hypothetical protein | phrog_6599 | unknown function | unknown function | -1 | 35428 | 36174 |
YP_009152913.1 | NC_027395_p62 | NAD+ diphosphatase | phrog_16989 | membrane protein | moron, auxiliary metabolic gene and host takeover | -1 | 44690 | 44824 |
YP_009152914.1 | NC_027395_p63 | hypothetical protein | singleton | unknown function | unknown function | -1 | 44824 | 45072 |
YP_009152886.1 | NC_027395_p35 | hypothetical protein | phrog_1152 | Rz-like spanin | lysis | -1 | 34596 | 34946 |
YP_009152957.1 | NC_027395_p106 | hypothetical protein | phrog_1972 | unknown function | unknown function | -1 | 66911 | 67162 |
YP_009152862.1 | NC_027395_p11 | hypothetical protein | phrog_2941 | virion structural protein | head and packaging | 1 | 9035 | 9787 |
YP_009152936.1 | NC_027395_p85 | glutamine amidotransferase | phrog_4736 | L-glutamine-D-fructose-6-phosphate aminotransferase | other | -1 | 55290 | 57320 |
YP_009152875.1 | NC_027395_p24 | hypothetical protein | phrog_14629 | unknown function | unknown function | 1 | 25674 | 30095 |
YP_009152963.1 | NC_027395_p112 | hypothetical protein | phrog_9955 | unknown function | unknown function | -1 | 68552 | 68809 |
YP_009152934.1 | NC_027395_p83 | hypothetical protein | phrog_13464 | unknown function | unknown function | -1 | 54849 | 55073 |
YP_009152915.1 | NC_027395_p64 | thymidylate synthase thyX/thy1 | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 45074 | 45730 |
YP_009152954.1 | NC_027395_p103 | hypothetical protein | phrog_13462 | unknown function | unknown function | -1 | 65984 | 66232 |
YP_009152951.1 | NC_027395_p100 | hypothetical protein | phrog_9481 | unknown function | unknown function | -1 | 65214 | 65345 |
YP_009152912.1 | NC_027395_p61 | hypothetical protein | phrog_4452 | anti-restriction nuclease | DNA, RNA and nucleotide metabolism | -1 | 44444 | 44635 |
YP_009152969.1 | NC_027395_p118 | hypothetical protein | phrog_14815 | unknown function | unknown function | -1 | 70904 | 71113 |
YP_009152897.1 | NC_027395_p46 | hypothetical protein | phrog_12230 | unknown function | unknown function | -1 | 38381 | 38557 |
YP_009152975.1 | NC_027395_p124 | hypothetical protein | phrog_14176 | polymerase | DNA, RNA and nucleotide metabolism | -1 | 75433 | 75696 |
YP_009152892.1 | NC_027395_p41 | hypothetical protein | phrog_11811 | unknown function | unknown function | -1 | 37234 | 37449 |
YP_009152881.1 | NC_027395_p30 | ATP-binding protein | phrog_139 | deoxynucleoside monophosphate kinase | other | -1 | 32065 | 32958 |
YP_009152944.1 | NC_027395_p93 | hypothetical protein | phrog_944 | membrane protein | moron, auxiliary metabolic gene and host takeover | -1 | 62863 | 63327 |
YP_009152902.1 | NC_027395_p51 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 39483 | 41327 |
YP_009152854.1 | NC_027395_p3 | hypothetical protein | phrog_12176 | ABC transporter | moron, auxiliary metabolic gene and host takeover | 1 | 816 | 1448 |
YP_009152908.1 | NC_027395_p57 | PhoH-like protein | phrog_170 | PhoH-like phosphate starvation-inducible | other | -1 | 43046 | 43783 |
YP_009152945.1 | NC_027395_p94 | hypothetical protein | phrog_6662 | unknown function | unknown function | -1 | 63327 | 63560 |
YP_009152909.1 | NC_027395_p58 | hypothetical protein | phrog_14369 | unknown function | unknown function | -1 | 43780 | 43965 |
YP_009152890.1 | NC_027395_p39 | hypothetical protein | phrog_14248 | unknown function | unknown function | -1 | 36591 | 36755 |
YP_009152901.1 | NC_027395_p50 | hypothetical protein | phrog_2510 | unknown function | unknown function | -1 | 39109 | 39474 |
YP_009152905.1 | NC_027395_p54 | hypothetical protein | phrog_6814 | unknown function | unknown function | -1 | 42047 | 42301 |
YP_009152928.1 | NC_027395_p77 | hypothetical protein | phrog_10819 | unknown function | unknown function | -1 | 52330 | 52533 |
YP_009152861.1 | NC_027395_p10 | Ig-like domain protein | phrog_13745 | Ig domain containing protein | other | 1 | 8535 | 8933 |
YP_009152882.1 | NC_027395_p31 | GTP-binding protein | phrog_289 | GTP-binding domain | other | -1 | 32955 | 33347 |
YP_009152853.1 | NC_027395_p2 | hypothetical protein | phrog_12698 | unknown function | unknown function | 1 | 569 | 823 |
YP_009152907.1 | NC_027395_p56 | hypothetical protein | phrog_4590 | unknown function | unknown function | -1 | 42675 | 42989 |
YP_009152863.1 | NC_027395_p12 | tail fiber | phrog_10305 | tail fiber protein | tail | 1 | 9797 | 12157 |
YP_009152918.1 | NC_027395_p67 | DNA-binding protein | phrog_3636 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 46270 | 46833 |
YP_009152864.1 | NC_027395_p13 | tail protein | phrog_6921 | tail fiber protein | tail | 1 | 12198 | 14369 |