Genomic map of Vibrio phage QH (NC_027397)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_027397
Definition
Vibrio phage QH, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Enhodamvirus; unclassified Enhodamvirus.
DB of origin
REFSEQ
Length
39725
Host Name
Vibrio cholerae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
48
%GC
50.5
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009153046.1 NC_027397_p20 tail fiber phrog_4440 tail fiber protein tail 1 19362 20435
YP_009153061.1 NC_027397_p35 hypothetical protein phrog_4049 unknown function unknown function -1 33440 33904
YP_009153057.1 NC_027397_p31 hypothetical protein phrog_2378 unknown function unknown function -1 30181 30648
YP_009153056.1 NC_027397_p30 hypothetical protein phrog_2402 unknown function unknown function -1 29251 30060
YP_009153050.1 NC_027397_p24 hypothetical protein phrog_7076 dATP triphosphohydrolase DNA, RNA and nucleotide metabolism -1 22672 23184
YP_009153039.1 NC_027397_p13 hypothetical protein phrog_8910 unknown function unknown function 1 9004 9306
YP_009153027.1 NC_027397_p1 hypothetical protein phrog_9836 unknown function unknown function 1 410 631
YP_009153065.1 NC_027397_p39 hypothetical protein phrog_9060 unknown function unknown function -1 35556 36041
YP_009153034.1 NC_027397_p8 hypothetical protein phrog_3437 major head protein head and packaging 1 6007 6975
YP_009153036.1 NC_027397_p10 hypothetical protein phrog_8869 unknown function unknown function 1 7326 8174
YP_009153054.1 NC_027397_p28 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 26799 28700
YP_009153058.1 NC_027397_p32 superfamily II DNA/RNA helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 30711 32180
YP_009153048.1 NC_027397_p22 hypothetical protein phrog_474 phosphofructokinase other -1 21844 22161
YP_009153060.1 NC_027397_p34 hypothetical protein phrog_8941 unknown function unknown function -1 32598 33290
YP_009153043.1 NC_027397_p17 hypothetical protein phrog_9153 unknown function unknown function 1 13752 15836
YP_009153032.1 NC_027397_p6 hypothetical protein phrog_5977 unknown function unknown function 1 4735 4992
YP_009153040.1 NC_027397_p14 major tail subunit phrog_9239 tail tubular protein tail 1 9330 11561
YP_009153055.1 NC_027397_p29 single stranded DNA-binding protein phrog_7364 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 28709 29185
YP_009153029.1 NC_027397_p3 terminase phrog_2 terminase large subunit head and packaging 1 1135 2841
YP_009153028.1 NC_027397_p2 hypothetical protein phrog_8823 terminase small subunit head and packaging 1 648 1148
YP_009153049.1 NC_027397_p23 hypothetical protein phrog_2165 DNA helicase DNA, RNA and nucleotide metabolism -1 22238 22675
YP_009153041.1 NC_027397_p15 hypothetical protein phrog_376 tail protein tail 1 11570 13354
YP_009153047.1 NC_027397_p21 outer capsid protein phrog_8700 unknown function unknown function 1 20437 21819
YP_009153069.1 NC_027397_p43 hypothetical protein phrog_9197 unknown function unknown function -1 37288 37512
YP_009153059.1 NC_027397_p33 hypothetical protein phrog_9940 unknown function unknown function -1 32245 32598
YP_009153070.1 NC_027397_p44 hypothetical protein phrog_9131 unknown function unknown function -1 37590 37880
YP_009153071.1 NC_027397_p45 hypothetical protein phrog_9346 unknown function unknown function -1 37987 38226
YP_009153038.1 NC_027397_p12 hypothetical protein phrog_894 endolysin lysis 1 8538 9011
YP_009153053.1 NC_027397_p27 integrase phrog_1156 DNA primase DNA, RNA and nucleotide metabolism -1 24521 26809
YP_009153044.1 NC_027397_p18 hypothetical protein phrog_8824 unknown function unknown function 1 15836 17008
YP_009153072.1 NC_027397_p46 hypothetical protein phrog_8878 unknown function unknown function -1 38237 38827
YP_009153037.1 NC_027397_p11 hypothetical protein phrog_8135 unknown function unknown function 1 8171 8536
YP_009153074.1 NC_027397_p48 hypothetical protein phrog_12668 unknown function unknown function -1 39420 39689
YP_009153042.1 NC_027397_p16 hypothetical protein phrog_9290 unknown function unknown function 1 13357 13755
YP_009153031.1 NC_027397_p5 hypothetical protein phrog_9429 unknown function unknown function 1 4495 4722
YP_009153035.1 NC_027397_p9 hypothetical protein phrog_8977 unknown function unknown function 1 7042 7311
YP_009153045.1 NC_027397_p19 hypothetical protein phrog_684 virion structural protein head and packaging 1 17010 19358
YP_009153068.1 NC_027397_p42 hypothetical protein phrog_13675 unknown function unknown function -1 37028 37291
YP_009153062.1 NC_027397_p36 hypothetical protein phrog_3392 unknown function unknown function -1 33901 34311
YP_009153073.1 NC_027397_p47 hypothetical protein phrog_14193 unknown function unknown function -1 38896 39387
YP_009153066.1 NC_027397_p40 hypothetical protein phrog_3600 antimicrobial peptide resistance and lipid A acylation protein PagP moron, auxiliary metabolic gene and host takeover -1 36051 36557
YP_009153064.1 NC_027397_p38 hypothetical protein phrog_9688 unknown function unknown function -1 34687 35457
YP_009153063.1 NC_027397_p37 hypothetical protein phrog_9382 unknown function unknown function -1 34313 34639
YP_009153052.1 NC_027397_p26 adenylosuccinate synthetase phrog_1211 2-aminooxy adenylosuccinate synthetase DNA, RNA and nucleotide metabolism -1 23448 24479
YP_009153051.1 NC_027397_p25 hypothetical protein phrog_9860 unknown function unknown function -1 23186 23446
YP_009153033.1 NC_027397_p7 hypothetical protein phrog_3742 unknown function unknown function 1 4997 5839
YP_009153030.1 NC_027397_p4 hypothetical protein phrog_332 head-tail adaptor connector 1 2852 4495
YP_009153067.1 NC_027397_p41 hypothetical protein phrog_9495 unknown function unknown function -1 36660 37031