| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_027400 |
Definition |
Propionibacterium phage PHL055N00, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus; unclassified Pahexavirus. |
DB of origin |
REFSEQ |
Length |
29264 |
Host Name |
Propionibacterium acnes |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
45 |
%GC |
54.15 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009153229.1 | NC_027400_p25 | hypothetical protein | phrog_1340 | unknown function | unknown function | -1 | 17970 | 18290 |
| YP_009153209.1 | NC_027400_p5 | scaffold protein | phrog_1879 | head scaffolding protein | head and packaging | 1 | 4080 | 4640 |
| YP_009153212.1 | NC_027400_p8 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 6102 | 6449 |
| YP_009153242.1 | NC_027400_p38 | hypothetical protein | phrog_1937 | unknown function | unknown function | -1 | 24839 | 25042 |
| YP_009153248.1 | NC_027400_p44 | hypothetical protein | phrog_7333 | unknown function | unknown function | 1 | 28714 | 28863 |
| YP_009153243.1 | NC_027400_p39 | hypothetical protein | phrog_1884 | unknown function | unknown function | -1 | 25039 | 25266 |
| YP_009153219.1 | NC_027400_p15 | minor tail subunit | phrog_106 | minor tail protein | tail | 1 | 11295 | 12251 |
| YP_009153220.1 | NC_027400_p16 | protease | phrog_110 | minor tail protein | tail | 1 | 12259 | 13416 |
| YP_009153246.1 | NC_027400_p42 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26296 | 26706 |
| YP_009153226.1 | NC_027400_p22 | hypothetical protein | phrog_2092 | unknown function | unknown function | -1 | 16764 | 17276 |
| YP_009153224.1 | NC_027400_p20 | endolysin | phrog_670 | endolysin | lysis | 1 | 15410 | 16267 |
| YP_009153247.1 | NC_027400_p43 | hypothetical protein | phrog_8276 | unknown function | unknown function | 1 | 28412 | 28552 |
| YP_009153249.1 | NC_027400_p45 | endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 28911 | 29213 |
| YP_009153233.1 | NC_027400_p29 | hypothetical protein | phrog_1881 | unknown function | unknown function | -1 | 19795 | 20352 |
| YP_009153227.1 | NC_027400_p23 | sigma factor | phrog_1729 | unknown function | unknown function | -1 | 17281 | 17538 |
| YP_009153240.1 | NC_027400_p36 | exonuclease | phrog_1870 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 23433 | 24374 |
| YP_009153231.1 | NC_027400_p27 | hypothetical protein | phrog_1923 | unknown function | unknown function | -1 | 19344 | 19544 |
| YP_009153236.1 | NC_027400_p32 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 21265 | 21621 |
| YP_009153225.1 | NC_027400_p21 | holin | phrog_443 | holin | lysis | 1 | 16280 | 16678 |
| YP_009153206.1 | NC_027400_p2 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 417 | 1889 |
| YP_009153239.1 | NC_027400_p35 | hypothetical protein | phrog_1890 | unknown function | unknown function | -1 | 23032 | 23436 |
| YP_009153232.1 | NC_027400_p28 | hypothetical protein | phrog_5969 | unknown function | unknown function | -1 | 19528 | 19770 |
| YP_009153205.1 | NC_027400_p1 | excinuclease | phrog_1897 | terminase small subunit | head and packaging | 1 | 2 | 373 |
| YP_009153217.1 | NC_027400_p13 | hypothetical protein | phrog_3166 | unknown function | unknown function | 1 | 8234 | 8521 |
| YP_009153237.1 | NC_027400_p33 | DNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 21531 | 22484 |
| YP_009153221.1 | NC_027400_p17 | hypothetical protein | phrog_1910 | lectin | other | 1 | 13424 | 14254 |
| YP_009153230.1 | NC_027400_p26 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18301 | 19347 |
| YP_009153208.1 | NC_027400_p4 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 3215 | 3970 |
| YP_009153222.1 | NC_027400_p18 | hypothetical protein | phrog_1958 | minor tail protein | tail | 1 | 14299 | 14562 |
| YP_009153244.1 | NC_027400_p40 | hypothetical protein | phrog_1908 | unknown function | unknown function | -1 | 25291 | 25875 |
| YP_009153207.1 | NC_027400_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 1886 | 3211 |
| YP_009153245.1 | NC_027400_p41 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 25945 | 26256 |
| YP_009153214.1 | NC_027400_p10 | hypothetical protein | phrog_1892 | minor tail protein | tail | 1 | 6743 | 7114 |
| YP_009153210.1 | NC_027400_p6 | major head protein | phrog_10 | major head protein | head and packaging | 1 | 4647 | 5594 |
| YP_009153241.1 | NC_027400_p37 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 24374 | 24733 |
| YP_009153235.1 | NC_027400_p31 | DNA primase | phrog_2304 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20904 | 21305 |
| YP_009153211.1 | NC_027400_p7 | hypothetical protein | phrog_1290 | head-tail adaptor | connector | 1 | 5639 | 6100 |
| YP_009153223.1 | NC_027400_p19 | collagen-like protein | phrog_1806 | collagen like minor tail | tail | 1 | 14565 | 15371 |
| YP_009153218.1 | NC_027400_p14 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 8529 | 11294 |
| YP_009153228.1 | NC_027400_p24 | hypothetical protein | phrog_1947 | unknown function | unknown function | -1 | 17683 | 17958 |
| YP_009153216.1 | NC_027400_p12 | hypothetical protein | phrog_1927 | tail assembly chaperone | tail | 1 | 7839 | 8135 |
| YP_009153238.1 | NC_027400_p34 | hypothetical protein | phrog_1288 | unknown function | unknown function | -1 | 22525 | 22992 |
| YP_009153234.1 | NC_027400_p30 | DNA primase | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20396 | 21067 |
| YP_009153213.1 | NC_027400_p9 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 6456 | 6746 |
| YP_009153215.1 | NC_027400_p11 | major tail protein | phrog_117 | major tail protein | tail | 1 | 7154 | 7810 |