| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_027622 |
Definition |
Propionibacterium phage Stormborn, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus. |
DB of origin |
REFSEQ |
Length |
29330 |
Host Name |
Propionibacterium acnes |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
46 |
%GC |
53.8 |
Number of singletons |
1 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009159949.1 | NC_027622_p32 | holliday junction resolvase | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 21149 | 21505 |
| YP_009159946.1 | NC_027622_p29 | hypothetical protein | phrog_1881 | unknown function | unknown function | -1 | 19679 | 20236 |
| YP_009159919.1 | NC_027622_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 379 | 1890 |
| YP_009159940.1 | NC_027622_p23 | helix-turn-helix DNA binding domain protein | phrog_1729 | unknown function | unknown function | -1 | 17149 | 17547 |
| YP_009159932.1 | NC_027622_p15 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 11299 | 12246 |
| YP_009159953.1 | NC_027622_p36 | exonuclease | phrog_1870 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 23339 | 24280 |
| YP_009159950.1 | NC_027622_p33 | DNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 21415 | 22368 |
| YP_009159959.1 | NC_027622_p42 | hypothetical protein | singleton | unknown function | unknown function | -1 | 25831 | 25953 |
| YP_009159962.2 | NC_027622_p45 | hypothetical protein | phrog_7333 | unknown function | unknown function | 1 | 28796 | 28918 |
| YP_009159935.1 | NC_027622_p18 | minor tail protein | phrog_1958 | minor tail protein | tail | 1 | 14305 | 14562 |
| YP_009159958.1 | NC_027622_p41 | hypothetical protein | phrog_1908 | unknown function | unknown function | -1 | 25197 | 25730 |
| YP_009159944.1 | NC_027622_p27 | helix-turn-helix DNA binding domain protein | phrog_1923 | unknown function | unknown function | -1 | 19228 | 19425 |
| YP_009159943.1 | NC_027622_p26 | exonuclease | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18185 | 19231 |
| YP_009159930.1 | NC_027622_p13 | tail assembly chaperone | phrog_1927 | tail assembly chaperone | tail | 1 | 7826 | 8122 |
| YP_009159925.1 | NC_027622_p8 | head-to-tail connector protein | phrog_501 | head closure Hc1 | connector | 1 | 6095 | 6442 |
| YP_009159960.1 | NC_027622_p43 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26097 | 26408 |
| YP_009159928.1 | NC_027622_p11 | major tail protein | phrog_117 | major tail protein | tail | 1 | 7159 | 7797 |
| YP_009159956.1 | NC_027622_p39 | hypothetical protein | phrog_1937 | unknown function | unknown function | -1 | 24745 | 24948 |
| YP_009159941.1 | NC_027622_p24 | hypothetical protein | phrog_1947 | unknown function | unknown function | -1 | 17551 | 17835 |
| YP_009159927.1 | NC_027622_p10 | minor tail protein | phrog_1892 | minor tail protein | tail | 1 | 6735 | 7106 |
| YP_009159920.1 | NC_027622_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 1887 | 3212 |
| YP_009159939.1 | NC_027622_p22 | hypothetical protein | phrog_2092 | unknown function | unknown function | -1 | 16646 | 17143 |
| YP_009159951.1 | NC_027622_p34 | hypothetical protein | phrog_1288 | unknown function | unknown function | -1 | 22415 | 22885 |
| YP_009159945.1 | NC_027622_p28 | hypothetical protein | phrog_5969 | unknown function | unknown function | -1 | 19409 | 19624 |
| YP_009159934.2 | NC_027622_p17 | minor tail protein | phrog_1910 | lectin | other | 1 | 13437 | 14255 |
| YP_009159933.2 | NC_027622_p16 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 12254 | 13411 |
| YP_009159929.1 | NC_027622_p12 | tail assembly chaperone | phrog_4075 | tail assembly chaperone | tail | 1 | 7826 | 8508 |
| YP_009159952.1 | NC_027622_p35 | hypothetical protein | phrog_1890 | unknown function | unknown function | -1 | 22938 | 23342 |
| YP_009159924.1 | NC_027622_p7 | head-to-tail connector protein | phrog_1290 | head-tail adaptor | connector | 1 | 5614 | 6093 |
| YP_009159938.1 | NC_027622_p21 | holin | phrog_443 | holin | lysis | 1 | 16165 | 16560 |
| YP_009159936.2 | NC_027622_p19 | minor tail protein | phrog_1806 | collagen like minor tail | tail | 1 | 14562 | 15086 |
| YP_009159963.2 | NC_027622_p46 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 28966 | 29268 |
| YP_009159937.1 | NC_027622_p20 | lysin | phrog_670 | endolysin | lysis | 1 | 15298 | 16152 |
| YP_009159921.1 | NC_027622_p4 | minor capsid protein | phrog_193 | head maturation protease | head and packaging | 1 | 3216 | 3971 |
| YP_009159942.1 | NC_027622_p25 | helix-turn-helix DNA binding domain protein | phrog_1340 | unknown function | unknown function | -1 | 17854 | 18174 |
| YP_009159918.2 | NC_027622_p1 | terminase small subunit | phrog_1897 | terminase small subunit | head and packaging | 1 | 71 | 379 |
| YP_009159923.2 | NC_027622_p6 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 4641 | 5588 |
| YP_009159922.1 | NC_027622_p5 | scaffolding protein | phrog_1879 | head scaffolding protein | head and packaging | 1 | 4080 | 4634 |
| YP_009159947.1 | NC_027622_p30 | DNA primase | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20280 | 20951 |
| YP_009159926.1 | NC_027622_p9 | minor tail protein | phrog_387 | neck protein | connector | 1 | 6448 | 6738 |
| YP_009159954.1 | NC_027622_p37 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 24280 | 24639 |
| YP_009159955.1 | NC_027622_p38 | hypothetical protein | phrog_4216 | unknown function | unknown function | -1 | 24665 | 24748 |
| YP_009159948.1 | NC_027622_p31 | DNA primase | phrog_2304 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20788 | 21189 |
| YP_009159961.1 | NC_027622_p44 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26440 | 26748 |
| YP_009159931.1 | NC_027622_p14 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 8516 | 11281 |
| YP_009159957.1 | NC_027622_p40 | hypothetical protein | phrog_1884 | unknown function | unknown function | -1 | 24945 | 25172 |