Genomic map of Propionibacterium phage Pirate (NC_027623)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_027623
Definition
Propionibacterium phage Pirate, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus.
DB of origin
REFSEQ
Length
29328
Host Name
Propionibacterium acnes
Host domain
Bacteria
Is prophage?
undef
Number of proteins
44
%GC
54.08
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009159976.1 NC_027623_p13 tail assembly chaperone phrog_1927 tail assembly chaperone tail 1 7814 8110
YP_009159986.1 NC_027623_p23 helix-turn-helix DNA binding domain protein phrog_1729 unknown function unknown function -1 17177 17578
YP_009160005.1 NC_027623_p42 hypothetical protein phrog_919 unknown function unknown function -1 26160 26471
YP_009159971.1 NC_027623_p8 head-to-tail connector protein phrog_501 head closure Hc1 connector 1 6096 6443
YP_009160000.1 NC_027623_p37 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism -1 24597 24950
YP_009159994.1 NC_027623_p31 DNA primase phrog_2304 DNA primase DNA, RNA and nucleotide metabolism -1 21099 21500
YP_009159997.1 NC_027623_p34 hypothetical protein phrog_1288 unknown function unknown function -1 22726 23196
YP_009159965.1 NC_027623_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 378 1889
YP_009159980.1 NC_027623_p17 minor tail protein phrog_1910 lectin other 1 13416 14234
YP_009159991.1 NC_027623_p28 hypothetical protein phrog_2548 unknown function unknown function -1 19430 19984
YP_009159999.1 NC_027623_p36 exonuclease phrog_1870 exonuclease DNA, RNA and nucleotide metabolism -1 23650 24597
YP_009159989.1 NC_027623_p26 exonuclease phrog_284 exonuclease DNA, RNA and nucleotide metabolism -1 18209 19255
YP_009159969.1 NC_027623_p6 major capsid protein phrog_10 major head protein head and packaging 1 4642 5589
YP_009159998.1 NC_027623_p35 hypothetical protein phrog_1890 unknown function unknown function -1 23243 23653
YP_009159995.1 NC_027623_p32 holliday junction resolvase phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 21460 21816
YP_009160007.1 NC_027623_p44 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 28965 29267
YP_009160006.1 NC_027623_p43 hypothetical protein phrog_919 unknown function unknown function -1 26511 26819
YP_009159982.1 NC_027623_p19 minor tail protein phrog_1806 collagen like minor tail tail 1 14545 15279
YP_009159988.1 NC_027623_p25 helix-turn-helix DNA binding domain protein phrog_1340 unknown function unknown function -1 17879 18199
YP_009159966.1 NC_027623_p3 portal protein phrog_104 portal protein head and packaging 1 1886 3211
YP_009159964.2 NC_027623_p1 terminase small subunit phrog_1897 terminase small subunit head and packaging 1 65 373
YP_009160001.1 NC_027623_p38 hypothetical protein phrog_4216 unknown function unknown function -1 24976 25059
YP_009159972.1 NC_027623_p9 minor tail protein phrog_387 neck protein connector 1 6450 6740
YP_009159981.1 NC_027623_p18 minor tail protein phrog_1958 minor tail protein tail 1 14279 14542
YP_009159967.1 NC_027623_p4 minor capsid protein phrog_193 head maturation protease head and packaging 1 3218 3973
YP_009159990.1 NC_027623_p27 helix-turn-helix DNA binding domain protein phrog_1923 unknown function unknown function -1 19252 19446
YP_009159975.1 NC_027623_p12 tail assembly chaperone phrog_4075 tail assembly chaperone tail 1 7814 8496
YP_009159993.1 NC_027623_p30 DNA primase phrog_849 DNA primase DNA, RNA and nucleotide metabolism -1 20591 21262
YP_009159996.1 NC_027623_p33 DNA helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 21816 22679
YP_009159984.1 NC_027623_p21 holin phrog_443 holin lysis 1 16195 16593
YP_009159983.1 NC_027623_p20 lysin phrog_670 endolysin lysis 1 15334 16188
YP_009159987.1 NC_027623_p24 hypothetical protein phrog_1947 unknown function unknown function -1 17582 17866
YP_009159978.1 NC_027623_p15 minor tail protein phrog_106 minor tail protein tail 1 11285 12232
YP_009159970.1 NC_027623_p7 head-to-tail connector protein phrog_1290 head-tail adaptor connector 1 5615 6094
YP_009160003.1 NC_027623_p40 hypothetical protein phrog_1884 unknown function unknown function -1 25256 25483
YP_009159979.1 NC_027623_p16 minor tail protein phrog_110 minor tail protein tail 1 12240 13397
YP_009159974.2 NC_027623_p11 major tail protein phrog_117 major tail protein tail 1 7161 7787
YP_009159977.1 NC_027623_p14 tape measure protein phrog_58 tail length tape measure protein tail 1 8504 11269
YP_009159973.1 NC_027623_p10 minor tail protein phrog_1892 minor tail protein tail 1 6737 7108
YP_009159968.1 NC_027623_p5 scaffolding protein phrog_1879 head scaffolding protein head and packaging 1 4084 4635
YP_009159992.1 NC_027623_p29 hypothetical protein phrog_1881 unknown function unknown function -1 19981 20547
YP_009159985.1 NC_027623_p22 hypothetical protein phrog_2092 unknown function unknown function -1 16681 17172
YP_009160002.1 NC_027623_p39 hypothetical protein phrog_1937 unknown function unknown function -1 25056 25259
YP_009160004.1 NC_027623_p41 hypothetical protein phrog_1908 unknown function unknown function -1 25506 26039