| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_027624 |
Definition |
Propionibacterium phage SKKY, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus. |
DB of origin |
REFSEQ |
Length |
29594 |
Host Name |
Propionibacterium acnes |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
47 |
%GC |
54.59 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009160017.1 | NC_027624_p10 | minor tail protein | phrog_1892 | minor tail protein | tail | 1 | 6764 | 7135 |
| YP_009160018.2 | NC_027624_p11 | major tail protein | phrog_117 | major tail protein | tail | 1 | 7186 | 7830 |
| YP_009160010.1 | NC_027624_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 1893 | 3218 |
| YP_009160038.1 | NC_027624_p31 | DNA primase | phrog_2304 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20953 | 21351 |
| YP_009160026.1 | NC_027624_p19 | minor tail protein | phrog_1806 | collagen like minor tail | tail | 1 | 14598 | 15227 |
| YP_009160009.1 | NC_027624_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 385 | 1896 |
| YP_009160049.1 | NC_027624_p42 | hypothetical protein | phrog_7707 | unknown function | unknown function | -1 | 25944 | 26126 |
| YP_009160045.1 | NC_027624_p38 | hypothetical protein | phrog_4216 | unknown function | unknown function | -1 | 24806 | 24889 |
| YP_009160052.1 | NC_027624_p45 | hypothetical protein | phrog_14941 | unknown function | unknown function | -1 | 27750 | 27971 |
| YP_009160012.1 | NC_027624_p5 | scaffolding protein | phrog_1879 | head scaffolding protein | head and packaging | 1 | 4084 | 4638 |
| YP_009160016.1 | NC_027624_p9 | minor tail protein | phrog_387 | neck protein | connector | 1 | 6477 | 6767 |
| YP_009160032.1 | NC_027624_p25 | helix-turn-helix DNA binding domain protein | phrog_1340 | unknown function | unknown function | -1 | 18022 | 18342 |
| YP_009160028.1 | NC_027624_p21 | holin | phrog_443 | holin | lysis | 1 | 16324 | 16722 |
| YP_009160033.1 | NC_027624_p26 | exonuclease | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18353 | 19396 |
| YP_009160040.1 | NC_027624_p33 | DNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 21577 | 22530 |
| YP_009160047.1 | NC_027624_p40 | hypothetical protein | phrog_1884 | unknown function | unknown function | -1 | 25083 | 25310 |
| YP_009160025.1 | NC_027624_p18 | minor tail protein | phrog_1958 | minor tail protein | tail | 1 | 14331 | 14594 |
| YP_009160054.1 | NC_027624_p47 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 29230 | 29532 |
| YP_009160023.1 | NC_027624_p16 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 12278 | 13435 |
| YP_009160046.1 | NC_027624_p39 | hypothetical protein | phrog_1937 | unknown function | unknown function | -1 | 24886 | 25086 |
| YP_009160048.1 | NC_027624_p41 | hypothetical protein | phrog_1908 | unknown function | unknown function | -1 | 25327 | 25860 |
| YP_009160051.1 | NC_027624_p44 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26712 | 27020 |
| YP_009160029.1 | NC_027624_p22 | hypothetical protein | phrog_2092 | unknown function | unknown function | -1 | 16807 | 17319 |
| YP_009160036.1 | NC_027624_p29 | hypothetical protein | phrog_1881 | unknown function | unknown function | -1 | 19841 | 20398 |
| YP_009160027.1 | NC_027624_p20 | lysin | phrog_670 | endolysin | lysis | 1 | 15460 | 16317 |
| YP_009160035.1 | NC_027624_p28 | hypothetical protein | phrog_5969 | unknown function | unknown function | -1 | 19577 | 19786 |
| YP_009160039.1 | NC_027624_p32 | holliday junction resolvase | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 21311 | 21667 |
| YP_009160020.1 | NC_027624_p13 | tail assembly chaperone | phrog_1927 | tail assembly chaperone | tail | 1 | 7859 | 8155 |
| YP_009160044.1 | NC_027624_p37 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 24424 | 24777 |
| YP_009160008.2 | NC_027624_p1 | terminase small subunit | phrog_1897 | terminase small subunit | head and packaging | 1 | 72 | 380 |
| YP_009160050.1 | NC_027624_p43 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26372 | 26680 |
| YP_009160022.1 | NC_027624_p15 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 11329 | 12270 |
| YP_009160034.1 | NC_027624_p27 | helix-turn-helix DNA binding domain protein | phrog_1923 | unknown function | unknown function | -1 | 19393 | 19593 |
| YP_009160024.1 | NC_027624_p17 | minor tail protein | phrog_1910 | lectin | other | 1 | 13456 | 14274 |
| YP_009160014.1 | NC_027624_p7 | head-to-tail connector protein | phrog_1290 | head-tail adaptor | connector | 1 | 5642 | 6121 |
| YP_009160031.1 | NC_027624_p24 | hypothetical protein | phrog_1947 | unknown function | unknown function | -1 | 17726 | 18010 |
| YP_009160043.1 | NC_027624_p36 | exonuclease | phrog_1870 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 23477 | 24424 |
| YP_009160053.2 | NC_027624_p46 | hypothetical protein | phrog_7333 | unknown function | unknown function | 1 | 29060 | 29218 |
| YP_009160015.1 | NC_027624_p8 | head-to-tail connector protein | phrog_501 | head closure Hc1 | connector | 1 | 6123 | 6470 |
| YP_009160011.1 | NC_027624_p4 | minor capsid protein | phrog_193 | head maturation protease | head and packaging | 1 | 3225 | 3980 |
| YP_009160041.1 | NC_027624_p34 | hypothetical protein | phrog_1288 | unknown function | unknown function | -1 | 22570 | 23028 |
| YP_009160042.1 | NC_027624_p35 | hypothetical protein | phrog_1890 | unknown function | unknown function | -1 | 23076 | 23480 |
| YP_009160030.1 | NC_027624_p23 | helix-turn-helix DNA binding domain protein | phrog_1729 | unknown function | unknown function | -1 | 17324 | 17722 |
| YP_009160013.1 | NC_027624_p6 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 4645 | 5616 |
| YP_009160019.1 | NC_027624_p12 | tail assembly chaperone | phrog_4075 | tail assembly chaperone | tail | 1 | 7859 | 8541 |
| YP_009160021.1 | NC_027624_p14 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 8549 | 11314 |
| YP_009160037.1 | NC_027624_p30 | DNA primase | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20442 | 21113 |