Genomic map of Propionibacterium phage SKKY (NC_027624)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_027624
Definition
Propionibacterium phage SKKY, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus.
DB of origin
REFSEQ
Length
29594
Host Name
Propionibacterium acnes
Host domain
Bacteria
Is prophage?
undef
Number of proteins
47
%GC
54.59
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009160017.1 NC_027624_p10 minor tail protein phrog_1892 minor tail protein tail 1 6764 7135
YP_009160018.2 NC_027624_p11 major tail protein phrog_117 major tail protein tail 1 7186 7830
YP_009160010.1 NC_027624_p3 portal protein phrog_104 portal protein head and packaging 1 1893 3218
YP_009160038.1 NC_027624_p31 DNA primase phrog_2304 DNA primase DNA, RNA and nucleotide metabolism -1 20953 21351
YP_009160026.1 NC_027624_p19 minor tail protein phrog_1806 collagen like minor tail tail 1 14598 15227
YP_009160009.1 NC_027624_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 385 1896
YP_009160049.1 NC_027624_p42 hypothetical protein phrog_7707 unknown function unknown function -1 25944 26126
YP_009160045.1 NC_027624_p38 hypothetical protein phrog_4216 unknown function unknown function -1 24806 24889
YP_009160052.1 NC_027624_p45 hypothetical protein phrog_14941 unknown function unknown function -1 27750 27971
YP_009160012.1 NC_027624_p5 scaffolding protein phrog_1879 head scaffolding protein head and packaging 1 4084 4638
YP_009160016.1 NC_027624_p9 minor tail protein phrog_387 neck protein connector 1 6477 6767
YP_009160032.1 NC_027624_p25 helix-turn-helix DNA binding domain protein phrog_1340 unknown function unknown function -1 18022 18342
YP_009160028.1 NC_027624_p21 holin phrog_443 holin lysis 1 16324 16722
YP_009160033.1 NC_027624_p26 exonuclease phrog_284 exonuclease DNA, RNA and nucleotide metabolism -1 18353 19396
YP_009160040.1 NC_027624_p33 DNA helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 21577 22530
YP_009160047.1 NC_027624_p40 hypothetical protein phrog_1884 unknown function unknown function -1 25083 25310
YP_009160025.1 NC_027624_p18 minor tail protein phrog_1958 minor tail protein tail 1 14331 14594
YP_009160054.1 NC_027624_p47 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 29230 29532
YP_009160023.1 NC_027624_p16 minor tail protein phrog_110 minor tail protein tail 1 12278 13435
YP_009160046.1 NC_027624_p39 hypothetical protein phrog_1937 unknown function unknown function -1 24886 25086
YP_009160048.1 NC_027624_p41 hypothetical protein phrog_1908 unknown function unknown function -1 25327 25860
YP_009160051.1 NC_027624_p44 hypothetical protein phrog_919 unknown function unknown function -1 26712 27020
YP_009160029.1 NC_027624_p22 hypothetical protein phrog_2092 unknown function unknown function -1 16807 17319
YP_009160036.1 NC_027624_p29 hypothetical protein phrog_1881 unknown function unknown function -1 19841 20398
YP_009160027.1 NC_027624_p20 lysin phrog_670 endolysin lysis 1 15460 16317
YP_009160035.1 NC_027624_p28 hypothetical protein phrog_5969 unknown function unknown function -1 19577 19786
YP_009160039.1 NC_027624_p32 holliday junction resolvase phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 21311 21667
YP_009160020.1 NC_027624_p13 tail assembly chaperone phrog_1927 tail assembly chaperone tail 1 7859 8155
YP_009160044.1 NC_027624_p37 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism -1 24424 24777
YP_009160008.2 NC_027624_p1 terminase small subunit phrog_1897 terminase small subunit head and packaging 1 72 380
YP_009160050.1 NC_027624_p43 hypothetical protein phrog_919 unknown function unknown function -1 26372 26680
YP_009160022.1 NC_027624_p15 minor tail protein phrog_106 minor tail protein tail 1 11329 12270
YP_009160034.1 NC_027624_p27 helix-turn-helix DNA binding domain protein phrog_1923 unknown function unknown function -1 19393 19593
YP_009160024.1 NC_027624_p17 minor tail protein phrog_1910 lectin other 1 13456 14274
YP_009160014.1 NC_027624_p7 head-to-tail connector protein phrog_1290 head-tail adaptor connector 1 5642 6121
YP_009160031.1 NC_027624_p24 hypothetical protein phrog_1947 unknown function unknown function -1 17726 18010
YP_009160043.1 NC_027624_p36 exonuclease phrog_1870 exonuclease DNA, RNA and nucleotide metabolism -1 23477 24424
YP_009160053.2 NC_027624_p46 hypothetical protein phrog_7333 unknown function unknown function 1 29060 29218
YP_009160015.1 NC_027624_p8 head-to-tail connector protein phrog_501 head closure Hc1 connector 1 6123 6470
YP_009160011.1 NC_027624_p4 minor capsid protein phrog_193 head maturation protease head and packaging 1 3225 3980
YP_009160041.1 NC_027624_p34 hypothetical protein phrog_1288 unknown function unknown function -1 22570 23028
YP_009160042.1 NC_027624_p35 hypothetical protein phrog_1890 unknown function unknown function -1 23076 23480
YP_009160030.1 NC_027624_p23 helix-turn-helix DNA binding domain protein phrog_1729 unknown function unknown function -1 17324 17722
YP_009160013.1 NC_027624_p6 major capsid protein phrog_10 major head protein head and packaging 1 4645 5616
YP_009160019.1 NC_027624_p12 tail assembly chaperone phrog_4075 tail assembly chaperone tail 1 7859 8541
YP_009160021.1 NC_027624_p14 tape measure protein phrog_58 tail length tape measure protein tail 1 8549 11314
YP_009160037.1 NC_027624_p30 DNA primase phrog_849 DNA primase DNA, RNA and nucleotide metabolism -1 20442 21113