Genomic map of Propionibacterium phage Kubed (NC_027625)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_027625
Definition
Propionibacterium phage Kubed, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus.
DB of origin
REFSEQ
Length
29461
Host Name
Propionibacterium acnes
Host domain
Bacteria
Is prophage?
undef
Number of proteins
44
%GC
54.52
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009160062.1 NC_027625_p8 head-to-tail connector protein phrog_501 head closure Hc1 connector 1 6096 6443
YP_009160065.1 NC_027625_p11 major tail protein phrog_117 major tail protein tail 1 7161 7790
YP_009160097.1 NC_027625_p43 hypothetical protein phrog_919 unknown function unknown function -1 26580 26888
YP_009160091.1 NC_027625_p37 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism -1 24662 25015
YP_009160092.1 NC_027625_p38 hypothetical protein phrog_4216 unknown function unknown function -1 25041 25124
YP_009160069.1 NC_027625_p15 minor tail protein phrog_106 minor tail protein tail 1 11291 12232
YP_009160068.1 NC_027625_p14 tape measure protein phrog_58 tail length tape measure protein tail 1 8509 11274
YP_009160095.2 NC_027625_p41 hypothetical protein phrog_1908 unknown function unknown function -1 25572 26111
YP_009160055.2 NC_027625_p1 terminase small subunit phrog_1897 terminase small subunit head and packaging 1 65 373
YP_009160093.1 NC_027625_p39 hypothetical protein phrog_1937 unknown function unknown function -1 25121 25324
YP_009160087.1 NC_027625_p33 DNA helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 21886 22749
YP_009160066.1 NC_027625_p12 tail assembly chaperone phrog_4075 tail assembly chaperone tail 1 7819 8501
YP_009160094.1 NC_027625_p40 hypothetical protein phrog_1884 unknown function unknown function -1 25321 25548
YP_009160056.1 NC_027625_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 378 1889
YP_009160063.1 NC_027625_p9 minor tail protein phrog_387 neck protein connector 1 6450 6740
YP_009160074.1 NC_027625_p20 lysin phrog_670 endolysin lysis 1 15391 16251
YP_009160080.1 NC_027625_p26 exonuclease phrog_284 exonuclease DNA, RNA and nucleotide metabolism -1 18268 19311
YP_009160076.1 NC_027625_p22 hypothetical protein phrog_2092 unknown function unknown function -1 16752 17240
YP_009160096.1 NC_027625_p42 hypothetical protein phrog_919 unknown function unknown function -1 26232 26543
YP_009160061.1 NC_027625_p7 head-to-tail connector protein phrog_1290 head-tail adaptor connector 1 5615 6094
YP_009160058.1 NC_027625_p4 minor capsid protein phrog_193 head maturation protease head and packaging 1 3215 3970
YP_009160064.1 NC_027625_p10 minor tail protein phrog_1892 minor tail protein tail 1 6737 7108
YP_009160083.1 NC_027625_p29 hypothetical protein phrog_1881 unknown function unknown function -1 20046 20612
YP_009160098.1 NC_027625_p44 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 29097 29399
YP_009160084.1 NC_027625_p30 DNA primase phrog_849 DNA primase DNA, RNA and nucleotide metabolism -1 20657 21328
YP_009160079.1 NC_027625_p25 helix-turn-helix DNA binding domain protein phrog_1340 unknown function unknown function -1 17938 18258
YP_009160078.1 NC_027625_p24 hypothetical protein phrog_1947 unknown function unknown function -1 17637 17921
YP_009160075.1 NC_027625_p21 holin phrog_443 holin lysis 1 16264 16662
YP_009160082.1 NC_027625_p28 hypothetical protein phrog_2548 unknown function unknown function -1 19483 20049
YP_009160088.1 NC_027625_p34 hypothetical protein phrog_1288 unknown function unknown function -1 22791 23258
YP_009160081.1 NC_027625_p27 helix-turn-helix DNA binding domain protein phrog_1923 unknown function unknown function -1 19308 19499
YP_009160057.1 NC_027625_p3 portal protein phrog_104 portal protein head and packaging 1 1886 3211
YP_009160067.1 NC_027625_p13 tail assembly chaperone phrog_1927 tail assembly chaperone tail 1 7819 8115
YP_009160085.1 NC_027625_p31 DNA primase phrog_2304 DNA primase DNA, RNA and nucleotide metabolism -1 21165 21566
YP_009160060.1 NC_027625_p6 major capsid protein phrog_10 major head protein head and packaging 1 4642 5589
YP_009160073.1 NC_027625_p19 minor tail protein phrog_1806 collagen like minor tail tail 1 14536 15333
YP_009160059.1 NC_027625_p5 scaffolding protein phrog_1879 head scaffolding protein head and packaging 1 4081 4635
YP_009160070.1 NC_027625_p16 minor tail protein phrog_110 minor tail protein tail 1 12239 13396
YP_009160086.1 NC_027625_p32 holliday junction resolvase phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 21526 21882
YP_009160090.1 NC_027625_p36 exonuclease phrog_1870 exonuclease DNA, RNA and nucleotide metabolism -1 23721 24662
YP_009160072.1 NC_027625_p18 minor tail protein phrog_1958 minor tail protein tail 1 14278 14535
YP_009160077.1 NC_027625_p23 helix-turn-helix DNA binding domain protein phrog_1729 unknown function unknown function -1 17246 17632
YP_009160089.1 NC_027625_p35 hypothetical protein phrog_1890 unknown function unknown function -1 23314 23724
YP_009160071.1 NC_027625_p17 minor tail protein phrog_1910 lectin other 1 13415 14233