| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_027626 |
Definition |
Propionibacterium phage Procrass1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus. |
DB of origin |
REFSEQ |
Length |
29347 |
Host Name |
Propionibacterium acnes |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
45 |
%GC |
54.03 |
Number of singletons |
1 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009160140.1 | NC_027626_p42 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26182 | 26493 |
| YP_009160139.2 | NC_027626_p41 | hypothetical protein | phrog_1908 | unknown function | unknown function | -1 | 25528 | 26061 |
| YP_009160109.2 | NC_027626_p11 | major tail protein | phrog_117 | major tail protein | tail | 1 | 7169 | 7795 |
| YP_009160130.1 | NC_027626_p32 | holliday junction resolvase | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 21529 | 21885 |
| YP_009160131.1 | NC_027626_p33 | DNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 21892 | 22755 |
| YP_009160114.1 | NC_027626_p16 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 12243 | 13400 |
| YP_009160111.1 | NC_027626_p13 | tail assembly chaperone | phrog_1927 | tail assembly chaperone | tail | 1 | 7823 | 8119 |
| YP_009160117.1 | NC_027626_p19 | minor tail protein | phrog_1806 | collagen like minor tail | tail | 1 | 14547 | 15344 |
| YP_009160122.1 | NC_027626_p24 | hypothetical protein | phrog_1947 | unknown function | unknown function | -1 | 17651 | 17926 |
| YP_009160120.1 | NC_027626_p22 | hypothetical protein | phrog_2092 | unknown function | unknown function | -1 | 16738 | 17250 |
| YP_009160103.1 | NC_027626_p5 | scaffolding protein | phrog_1879 | head scaffolding protein | head and packaging | 1 | 4079 | 4633 |
| YP_009160135.1 | NC_027626_p37 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 24619 | 24972 |
| YP_009160112.1 | NC_027626_p14 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 8513 | 11278 |
| YP_009160104.1 | NC_027626_p6 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 4640 | 5587 |
| YP_009160115.1 | NC_027626_p17 | minor tail protein | phrog_1910 | lectin | other | 1 | 13418 | 14236 |
| YP_009160101.1 | NC_027626_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 1881 | 3206 |
| YP_009160106.1 | NC_027626_p8 | head-to-tail connector protein | phrog_501 | head closure Hc1 | connector | 1 | 6098 | 6445 |
| YP_009160128.1 | NC_027626_p30 | DNA primase | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20660 | 21331 |
| YP_009160132.1 | NC_027626_p34 | hypothetical protein | phrog_1288 | unknown function | unknown function | -1 | 22796 | 23257 |
| YP_009160124.1 | NC_027626_p26 | exonuclease | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18271 | 19317 |
| YP_009160142.1 | NC_027626_p44 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28718 | 28885 |
| YP_009160116.1 | NC_027626_p18 | minor tail protein | phrog_1958 | minor tail protein | tail | 1 | 14281 | 14544 |
| YP_009160134.1 | NC_027626_p36 | exonuclease | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 23876 | 24619 |
| YP_009160119.1 | NC_027626_p21 | holin | phrog_443 | holin | lysis | 1 | 16256 | 16654 |
| YP_009160100.1 | NC_027626_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 373 | 1884 |
| YP_009160138.1 | NC_027626_p40 | hypothetical protein | phrog_1884 | unknown function | unknown function | -1 | 25278 | 25505 |
| YP_009160129.1 | NC_027626_p31 | DNA primase | phrog_2304 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 21168 | 21569 |
| YP_009160125.1 | NC_027626_p27 | helix-turn-helix DNA binding domain protein | phrog_1923 | unknown function | unknown function | -1 | 19314 | 19508 |
| YP_009160123.1 | NC_027626_p25 | helix-turn-helix DNA binding domain protein | phrog_1340 | unknown function | unknown function | -1 | 17941 | 18261 |
| YP_009160141.1 | NC_027626_p43 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26530 | 26838 |
| YP_009160143.1 | NC_027626_p45 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 28983 | 29285 |
| YP_009160110.1 | NC_027626_p12 | tail assembly chaperone | phrog_4075 | tail assembly chaperone | tail | 1 | 7823 | 8505 |
| YP_009160105.1 | NC_027626_p7 | head-to-tail connector protein | phrog_1290 | head-tail adaptor | connector | 1 | 5617 | 6096 |
| YP_009160102.1 | NC_027626_p4 | minor capsid protein | phrog_193 | head maturation protease | head and packaging | 1 | 3213 | 3968 |
| YP_009160137.1 | NC_027626_p39 | hypothetical protein | phrog_1937 | unknown function | unknown function | -1 | 25078 | 25281 |
| YP_009160126.1 | NC_027626_p28 | hypothetical protein | phrog_2548 | unknown function | unknown function | -1 | 19492 | 20055 |
| YP_009160107.1 | NC_027626_p9 | minor tail protein | phrog_387 | neck protein | connector | 1 | 6452 | 6742 |
| YP_009160121.1 | NC_027626_p23 | helix-turn-helix DNA binding domain protein | phrog_1729 | unknown function | unknown function | -1 | 17255 | 17647 |
| YP_009160108.1 | NC_027626_p10 | minor tail protein | phrog_1892 | minor tail protein | tail | 1 | 6739 | 7110 |
| YP_009160113.1 | NC_027626_p15 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 11294 | 12235 |
| YP_009160099.2 | NC_027626_p1 | terminase small subunit | phrog_1897 | terminase small subunit | head and packaging | 1 | 65 | 373 |
| YP_009160136.1 | NC_027626_p38 | hypothetical protein | phrog_4216 | unknown function | unknown function | -1 | 24998 | 25081 |
| YP_009160127.1 | NC_027626_p29 | hypothetical protein | phrog_1881 | unknown function | unknown function | -1 | 20052 | 20615 |
| YP_009160118.2 | NC_027626_p20 | lysin | phrog_670 | endolysin | lysis | 1 | 15386 | 16243 |
| YP_009160133.1 | NC_027626_p35 | hypothetical protein | phrog_1890 | unknown function | unknown function | -1 | 23308 | 23718 |