| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_027627 |
Definition |
Propionibacterium phage Solid, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus. |
DB of origin |
REFSEQ |
Length |
29440 |
Host Name |
Propionibacterium acnes |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
45 |
%GC |
53.91 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009160188.1 | NC_027627_p45 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 29077 | 29379 |
| YP_009160181.1 | NC_027627_p38 | hypothetical protein | phrog_4216 | unknown function | unknown function | -1 | 25046 | 25129 |
| YP_009160148.1 | NC_027627_p5 | scaffolding protein | phrog_1879 | head scaffolding protein | head and packaging | 1 | 4083 | 4637 |
| YP_009160157.1 | NC_027627_p14 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 8502 | 11267 |
| YP_009160186.1 | NC_027627_p43 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26581 | 26889 |
| YP_009160164.1 | NC_027627_p21 | holin | phrog_443 | holin | lysis | 1 | 16253 | 16651 |
| YP_009160174.1 | NC_027627_p31 | DNA primase | phrog_2304 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 21181 | 21582 |
| YP_009160161.1 | NC_027627_p18 | minor tail protein | phrog_1958 | minor tail protein | tail | 1 | 14269 | 14532 |
| YP_009160153.1 | NC_027627_p10 | minor tail protein | phrog_1892 | minor tail protein | tail | 1 | 6740 | 7111 |
| YP_009160169.1 | NC_027627_p26 | exonuclease | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18281 | 19327 |
| YP_009160184.2 | NC_027627_p41 | hypothetical protein | phrog_1908 | unknown function | unknown function | -1 | 25576 | 26109 |
| YP_009160152.1 | NC_027627_p9 | minor tail protein | phrog_387 | neck protein | connector | 1 | 6453 | 6743 |
| YP_009160159.2 | NC_027627_p16 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 12232 | 13389 |
| YP_009160185.1 | NC_027627_p42 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26230 | 26541 |
| YP_009160150.1 | NC_027627_p7 | head-to-tail connector protein | phrog_1290 | head-tail adaptor | connector | 1 | 5618 | 6097 |
| YP_009160178.1 | NC_027627_p35 | hypothetical protein | phrog_1890 | unknown function | unknown function | -1 | 23313 | 23723 |
| YP_009160175.1 | NC_027627_p32 | holliday junction resolvase | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 21542 | 21901 |
| YP_009160177.1 | NC_027627_p34 | hypothetical protein | phrog_1288 | unknown function | unknown function | -1 | 22801 | 23262 |
| YP_009160172.1 | NC_027627_p29 | hypothetical protein | phrog_1881 | unknown function | unknown function | -1 | 20062 | 20628 |
| YP_009160176.1 | NC_027627_p33 | DNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 21898 | 22761 |
| YP_009160180.1 | NC_027627_p37 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 24667 | 25020 |
| YP_009160149.1 | NC_027627_p6 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 4644 | 5591 |
| YP_009160182.1 | NC_027627_p39 | hypothetical protein | phrog_1937 | unknown function | unknown function | -1 | 25126 | 25329 |
| YP_009160144.2 | NC_027627_p1 | terminase small subunit | phrog_1897 | terminase small subunit | head and packaging | 1 | 64 | 372 |
| YP_009160156.1 | NC_027627_p13 | tail assembly chaperone | phrog_1927 | tail assembly chaperone | tail | 1 | 7812 | 8108 |
| YP_009160166.1 | NC_027627_p23 | helix-turn-helix DNA binding domain protein | phrog_1729 | unknown function | unknown function | -1 | 17251 | 17649 |
| YP_009160165.1 | NC_027627_p22 | hypothetical protein | phrog_2092 | unknown function | unknown function | -1 | 16734 | 17246 |
| YP_009160179.1 | NC_027627_p36 | exonuclease | phrog_1870 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 23720 | 24667 |
| YP_009160145.1 | NC_027627_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 377 | 1888 |
| YP_009160170.1 | NC_027627_p27 | helix-turn-helix DNA binding domain protein | phrog_1923 | unknown function | unknown function | -1 | 19324 | 19521 |
| YP_009160187.1 | NC_027627_p44 | hypothetical protein | phrog_5628 | unknown function | unknown function | 1 | 28878 | 29039 |
| YP_009160147.1 | NC_027627_p4 | minor capsid protein | phrog_193 | head maturation protease | head and packaging | 1 | 3217 | 3972 |
| YP_009160155.1 | NC_027627_p12 | tail assembly chaperone | phrog_4075 | tail assembly chaperone | tail | 1 | 7812 | 8494 |
| YP_009160151.1 | NC_027627_p8 | head-to-tail connector protein | phrog_501 | head closure Hc1 | connector | 1 | 6099 | 6446 |
| YP_009160167.1 | NC_027627_p24 | hypothetical protein | phrog_1947 | unknown function | unknown function | -1 | 17653 | 17937 |
| YP_009160162.1 | NC_027627_p19 | minor tail protein | phrog_1806 | collagen like minor tail | tail | 1 | 14535 | 15341 |
| YP_009160183.1 | NC_027627_p40 | hypothetical protein | phrog_1884 | unknown function | unknown function | -1 | 25326 | 25553 |
| YP_009160168.1 | NC_027627_p25 | helix-turn-helix DNA binding domain protein | phrog_1340 | unknown function | unknown function | -1 | 17951 | 18271 |
| YP_009160154.2 | NC_027627_p11 | major tail protein | phrog_117 | major tail protein | tail | 1 | 7163 | 7783 |
| YP_009160171.1 | NC_027627_p28 | hypothetical protein | phrog_2548 | unknown function | unknown function | -1 | 19505 | 20065 |
| YP_009160163.1 | NC_027627_p20 | lysin | phrog_670 | endolysin | lysis | 1 | 15383 | 16240 |
| YP_009160158.1 | NC_027627_p15 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 11283 | 12224 |
| YP_009160173.1 | NC_027627_p30 | DNA primase | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20673 | 21344 |
| YP_009160146.1 | NC_027627_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 1885 | 3210 |
| YP_009160160.1 | NC_027627_p17 | minor tail protein | phrog_1910 | lectin | other | 1 | 13409 | 14227 |